RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 APOL4Q9BPW4 351 aa2.63□□□□□ -1.99
PTPRK-220ENST00000531466 NUDT9Q9BW91 350 aa2.63□□□□□ -1.99
PTPRK-220ENST00000531466 OSBPL11Q9BXB4 747 aa2.63□□□□□ -1.99
PTPRK-220ENST00000531466 ZBP1Q9H171 429 aa2.63□□□□□ -1.99
PTPRK-220ENST00000531466 ZNF665Q9H7R5 613 aa2.63□□□□□ -1.99
PTPRK-220ENST00000531466 PLEKHA3Q9HB20 300 aa2.63□□□□□ -1.99
PTPRK-220ENST00000531466 PATZ1Q9HBE1 687 aaKnown RBP2.63□□□□□ -1.99
PTPRK-220ENST00000531466 INPP5EQ9NRR6 644 aa2.63□□□□□ -1.99
PTPRK-220ENST00000531466 NLE1Q9NVX2 485 aaPredicted RBP2.63□□□□□ -1.99
PTPRK-220ENST00000531466 C1orf123Q9NWV4 160 aa2.63□□□□□ -1.99
PTPRK-220ENST00000531466 DUS2Q9NX74 493 aaKnown RBP2.63□□□□□ -1.99
PTPRK-220ENST00000531466 TAS2R13Q9NYV9 303 aa2.63□□□□□ -1.99
PTPRK-220ENST00000531466 GNG8Q9UK08 70 aa2.63□□□□□ -1.99
PTPRK-220ENST00000531466 BAIAP2Q9UQB8 552 aa2.63□□□□□ -1.99
PTPRK-220ENST00000531466 TIMM10BQ9Y5J6 103 aa2.63□□□□□ -1.99
PTPRK-220ENST00000531466 SYNJ2O15056 1496 aa2.63□□□□□ -1.99
PTPRK-220ENST00000531466 NUP153P49790 1475 aaKnown RBP2.63□□□□□ -1.99
PTPRK-220ENST00000531466 CCDC18Q5T9S5 1454 aa2.63□□□□□ -1.99
PTPRK-220ENST00000531466 MED23Q9ULK4 1368 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 MYOM3Q5VTT5 1437 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 FMN1Q68DA7 1419 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 KIR2DS1A0A191URI9 304 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 ANKRD20A5PA0PJZ0 165 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 PINLYPA6NC86 204 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 PRORSD1PA6NEY8 169 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 LRRC30A6NM36 301 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 FOXI3A8MTJ6 420 aaPredicted RBP2.62□□□□□ -1.99
PTPRK-220ENST00000531466 H7C2Y5 167 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 GPR31O00270 319 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 FAAHO00519 579 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 TP53I11O14683 189 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 MRASO14807 208 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 AZIN1O14977 448 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 CYB5BO43169 146 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 CDC40O60508 579 aaKnown RBP eCLIP2.62□□□□□ -1.99
PTPRK-220ENST00000531466 POP7O75817 140 aaKnown RBP2.62□□□□□ -1.99
PTPRK-220ENST00000531466 MPZL1O95297 269 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 IFNA17P01571 189 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 IGHG4P01861 327 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 TYMSP04818 313 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 SERPINA7P05543 415 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 BPGMP07738 259 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 H2BFMP0C1H6 154 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 ACSM4P0C7M7 580 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 OR13C7P0DN81 318 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 MBL2P11226 248 aaPredicted RBP2.62□□□□□ -1.99
PTPRK-220ENST00000531466 ZNF43P17038 809 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 MYL12AP19105 171 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 ALOX5APP20292 161 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 PVALBP20472 110 aaPredicted RBP2.62□□□□□ -1.99
PTPRK-220ENST00000531466 HIST1H1TP22492 207 aaPredicted RBP2.62□□□□□ -1.99
PTPRK-220ENST00000531466 HTR1EP28566 365 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 HTR1FP30939 366 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 MAP2K4P45985 399 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 XCR1P46094 333 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 EFNA3P52797 238 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 CLDN6P56747 220 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 DNAJB13P59910 316 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 SLC35B1P78383 322 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 NTHL1P78549 312 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 IL5RAQ01344 420 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 ACVR1Q04771 509 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 TWF1Q12792 350 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 EDDM3AQ14507 147 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 KIR2DS1Q14954 304 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 EXOSC7Q15024 291 aaKnown RBP2.62□□□□□ -1.99
PTPRK-220ENST00000531466 TTLL9Q3SXZ7 439 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 TMEM97Q5BJF2 176 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 FAM78BQ5VT40 261 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 SAMD13Q5VXD3 122 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 RTL6Q6ICC9 239 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 TRIM40Q6P9F5 258 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 UQCC3Q6UW78 93 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 TOMM20LQ6UXN7 152 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 C19orf35Q6ZS72 473 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 ZSCAN4Q8NAM6 433 aaPredicted RBP2.62□□□□□ -1.99
PTPRK-220ENST00000531466 ZNF439Q8NDP4 499 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 OR13G1Q8NGZ3 307 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 OR4L1Q8NH43 312 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 OR13C6PQ8NH95 151 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 ITFG1Q8TB96 612 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 FAM110BQ8TC76 370 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 ACER1Q8TDN7 264 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 ABHD3Q8WU67 409 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 NAT14Q8WUY8 206 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 EEF1AKMT1Q8WVE0 214 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 RAB8BQ92930 207 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 RPEQ96AT9 228 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 RAB3CQ96E17 227 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 CCDC126Q96EE4 140 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 MRPL53Q96EL3 112 aaKnown RBP2.62□□□□□ -1.99
PTPRK-220ENST00000531466 CPNE2Q96FN4 548 aaPredicted RBP2.62□□□□□ -1.99
PTPRK-220ENST00000531466 IMP4Q96G21 291 aaKnown RBP2.62□□□□□ -1.99
PTPRK-220ENST00000531466 PYURFQ96I23 114 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 HBEGFQ99075 208 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 CNN2Q99439 309 aaKnown RBP2.62□□□□□ -1.99
PTPRK-220ENST00000531466 ATP5SQ99766 215 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 CMSS1Q9BQ75 279 aaKnown RBP2.62□□□□□ -1.99
PTPRK-220ENST00000531466 TMEM208Q9BTX3 173 aa2.62□□□□□ -1.99
PTPRK-220ENST00000531466 ACTR3CQ9C0K3 210 aaPredicted RBP2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms