RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 GABRA2P47869 451 aa12.92□□□□□ -0.34
CPSF1-205ENST00000531042 UBE2E1P51965 193 aa12.92□□□□□ -0.34
CPSF1-205ENST00000531042 CRISP1P54107 249 aa12.92□□□□□ -0.34
CPSF1-205ENST00000531042 ROM1Q03395 351 aa12.92□□□□□ -0.34
CPSF1-205ENST00000531042 PDLIM3Q53GG5 364 aaPredicted RBP12.92□□□□□ -0.34
CPSF1-205ENST00000531042 DMRTC1Q5HYR2 192 aa12.92□□□□□ -0.34
CPSF1-205ENST00000531042 NCR3LG1Q68D85 454 aa12.92□□□□□ -0.34
CPSF1-205ENST00000531042 ZNF679Q8IYX0 411 aa12.92□□□□□ -0.34
CPSF1-205ENST00000531042 PNKDQ8N490 385 aa12.92□□□□□ -0.34
CPSF1-205ENST00000531042 ZNRF1Q8ND25 227 aa12.92□□□□□ -0.34
CPSF1-205ENST00000531042 OR5A2Q8NGI9 324 aa12.92□□□□□ -0.34
CPSF1-205ENST00000531042 ZNF671Q8TAW3 534 aa12.92□□□□□ -0.34
CPSF1-205ENST00000531042 OR51E1Q8TCB6 317 aa12.92□□□□□ -0.34
CPSF1-205ENST00000531042 DNAJC9Q8WXX5 260 aa12.92□□□□□ -0.34
CPSF1-205ENST00000531042 AQP3Q92482 292 aa12.92□□□□□ -0.34
CPSF1-205ENST00000531042 OR8B4Q96RC9 309 aa12.92□□□□□ -0.34
CPSF1-205ENST00000531042 C16orf95Q9H693 158 aa12.92□□□□□ -0.34
CPSF1-205ENST00000531042 METTL8Q9H825 291 aaKnown RBP12.92□□□□□ -0.34
CPSF1-205ENST00000531042 GPR84Q9NQS5 396 aa12.92□□□□□ -0.34
CPSF1-205ENST00000531042 PAPOLBQ9NRJ5 636 aaKnown RBP12.92□□□□□ -0.34
CPSF1-205ENST00000531042 COPS3Q9UNS2 423 aa12.92□□□□□ -0.34
CPSF1-205ENST00000531042 MAB21L2Q9Y586 359 aa12.92□□□□□ -0.34
CPSF1-205ENST00000531042 TGP01266 2768 aa12.92□□□□□ -0.34
CPSF1-205ENST00000531042 A0A1W2PQ09 198 aa12.91□□□□□ -0.34
CPSF1-205ENST00000531042 BTBD17A6NE02 478 aa12.91□□□□□ -0.34
CPSF1-205ENST00000531042 OR5B21A6NL26 309 aa12.91□□□□□ -0.34
CPSF1-205ENST00000531042 M0QZ24 198 aa12.91□□□□□ -0.34
CPSF1-205ENST00000531042 GYG2O15488 501 aa12.91□□□□□ -0.34
CPSF1-205ENST00000531042 GSC2O15499 205 aa12.91□□□□□ -0.34
CPSF1-205ENST00000531042 SAA4P35542 130 aa12.91□□□□□ -0.34
CPSF1-205ENST00000531042 ACSM1Q08AH1 577 aa12.91□□□□□ -0.34
CPSF1-205ENST00000531042 RIPPLY1Q0D2K3 151 aa12.91□□□□□ -0.34
CPSF1-205ENST00000531042 DNAL1Q4LDG9 190 aa12.91□□□□□ -0.34
CPSF1-205ENST00000531042 ZBTB37Q5TC79 503 aa12.91□□□□□ -0.34
CPSF1-205ENST00000531042 LCN1P1Q5VSP4 162 aa12.91□□□□□ -0.34
CPSF1-205ENST00000531042 DHRS7BQ6IAN0 325 aaPredicted RBP12.91□□□□□ -0.34
CPSF1-205ENST00000531042 ASPHD2Q6ICH7 369 aa12.91□□□□□ -0.34
CPSF1-205ENST00000531042 MOB3CQ70IA8 216 aa12.91□□□□□ -0.34
CPSF1-205ENST00000531042 THAP5Q7Z6K1 395 aa12.91□□□□□ -0.34
CPSF1-205ENST00000531042 COMMD2Q86X83 199 aa12.91□□□□□ -0.34
CPSF1-205ENST00000531042 ASB17Q8WXJ9 295 aa12.91□□□□□ -0.34
CPSF1-205ENST00000531042 PPP1R14AQ96A00 147 aa12.91□□□□□ -0.34
CPSF1-205ENST00000531042 NRBF2Q96F24 287 aa12.91□□□□□ -0.34
CPSF1-205ENST00000531042 DUS3LQ96G46 650 aaKnown RBP12.91□□□□□ -0.34
CPSF1-205ENST00000531042 SDSLQ96GA7 329 aa12.91□□□□□ -0.34
CPSF1-205ENST00000531042 ELL3Q9HB65 397 aaPredicted RBP12.91□□□□□ -0.34
CPSF1-205ENST00000531042 POMPQ9Y244 141 aa12.91□□□□□ -0.34
CPSF1-205ENST00000531042 TMEM14AQ9Y6G1 99 aa12.91□□□□□ -0.34
CPSF1-205ENST00000531042 TSPAN9O75954 239 aa12.9□□□□□ -0.34
CPSF1-205ENST00000531042 PAHP00439 452 aa12.9□□□□□ -0.34
CPSF1-205ENST00000531042 FAHP16930 419 aa12.9□□□□□ -0.34
CPSF1-205ENST00000531042 TGFBR2P37173 567 aa12.9□□□□□ -0.34
CPSF1-205ENST00000531042 DAPP51397 102 aa12.9□□□□□ -0.34
CPSF1-205ENST00000531042 RIDAP52758 137 aaKnown RBP12.9□□□□□ -0.34
CPSF1-205ENST00000531042 MFGE8Q08431 387 aaPredicted RBP12.9□□□□□ -0.34
CPSF1-205ENST00000531042 BLMHQ13867 455 aa12.9□□□□□ -0.34
CPSF1-205ENST00000531042 PTGES3Q15185 160 aaKnown RBP12.9□□□□□ -0.34
CPSF1-205ENST00000531042 ZNF829Q3KNS6 432 aaPredicted RBP12.9□□□□□ -0.34
CPSF1-205ENST00000531042 MIDNQ504T8 468 aa12.9□□□□□ -0.34
CPSF1-205ENST00000531042 PLCXD3Q63HM9 321 aa12.9□□□□□ -0.34
CPSF1-205ENST00000531042 FAHD1Q6P587 224 aa12.9□□□□□ -0.34
CPSF1-205ENST00000531042 HAGHLQ6PII5 290 aaPredicted RBP12.9□□□□□ -0.34
CPSF1-205ENST00000531042 TMEM185AQ8NFB2 350 aa12.9□□□□□ -0.34
CPSF1-205ENST00000531042 SLC7A6OSQ96CW6 309 aaPredicted RBP12.9□□□□□ -0.34
CPSF1-205ENST00000531042 RBM4BQ9BQ04 359 aaKnown RBP12.9□□□□□ -0.34
CPSF1-205ENST00000531042 TTTY10Q9BZA0 68 aa12.9□□□□□ -0.34
CPSF1-205ENST00000531042 MMP27Q9H306 513 aa12.9□□□□□ -0.34
CPSF1-205ENST00000531042 RASL12Q9NYN1 266 aa12.9□□□□□ -0.34
CPSF1-205ENST00000531042 NUFIP1Q9UHK0 495 aaKnown RBP12.9□□□□□ -0.34
CPSF1-205ENST00000531042 ENPP5Q9UJA9 477 aa12.9□□□□□ -0.34
CPSF1-205ENST00000531042 PIGLQ9Y2B2 252 aa12.9□□□□□ -0.34
CPSF1-205ENST00000531042 TRBV23-1A0A0A0MS06 115 aa12.89□□□□□ -0.35
CPSF1-205ENST00000531042 PRKYO43930 277 aa12.89□□□□□ -0.35
CPSF1-205ENST00000531042 SRSF10O75494 262 aaKnown RBP12.89□□□□□ -0.35
CPSF1-205ENST00000531042 MTRF1O75570 445 aaKnown RBP12.89□□□□□ -0.35
CPSF1-205ENST00000531042 DHRS3O75911 302 aa12.89□□□□□ -0.35
CPSF1-205ENST00000531042 NRASP01111 189 aa12.89□□□□□ -0.35
CPSF1-205ENST00000531042 TTRP02766 147 aa12.89□□□□□ -0.35
CPSF1-205ENST00000531042 ESRRGP62508 458 aa12.89□□□□□ -0.35
CPSF1-205ENST00000531042 HCP5Q6MZN7 132 aa12.89□□□□□ -0.35
CPSF1-205ENST00000531042 ACP7Q6ZNF0 438 aa12.89□□□□□ -0.35
CPSF1-205ENST00000531042 BCDIN3DQ7Z5W3 292 aaKnown RBP12.89□□□□□ -0.35
CPSF1-205ENST00000531042 OR5D13Q8NGL4 314 aa12.89□□□□□ -0.35
CPSF1-205ENST00000531042 OR5R1Q8NH85 324 aa12.89□□□□□ -0.35
CPSF1-205ENST00000531042 UTP4Q969X6 686 aaKnown RBP12.89□□□□□ -0.35
CPSF1-205ENST00000531042 CNN2Q99439 309 aaKnown RBP12.89□□□□□ -0.35
CPSF1-205ENST00000531042 TCF7L1Q9HCS4 588 aa12.89□□□□□ -0.35
CPSF1-205ENST00000531042 IKZF2Q9UKS7 526 aa12.89□□□□□ -0.35
CPSF1-205ENST00000531042 WNK1Q9H4A3 2382 aa12.88□□□□□ -0.35
CPSF1-205ENST00000531042 NOTCH1P46531 2555 aa12.88□□□□□ -0.35
CPSF1-205ENST00000531042 H0YAE9 185 aa12.88□□□□□ -0.35
CPSF1-205ENST00000531042 DNAJC8O75937 253 aaPredicted RBP12.88□□□□□ -0.35
CPSF1-205ENST00000531042 ZNF684Q5T5D7 378 aa12.88□□□□□ -0.35
CPSF1-205ENST00000531042 MEPCEQ7L2J0 689 aaKnown RBP12.88□□□□□ -0.35
CPSF1-205ENST00000531042 FAM185AQ8N0U4 392 aa12.88□□□□□ -0.35
CPSF1-205ENST00000531042 CD177Q8N6Q3 437 aa12.88□□□□□ -0.35
CPSF1-205ENST00000531042 POC1AQ8NBT0 407 aa12.88□□□□□ -0.35
CPSF1-205ENST00000531042 BEND2Q8NDZ0 799 aa12.88□□□□□ -0.35
CPSF1-205ENST00000531042 ZNF488Q96MN9 340 aa12.88□□□□□ -0.35
CPSF1-205ENST00000531042 APOL4Q9BPW4 351 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms