RNA–Protein interactions for RNA: ENST00000530790.5

VPS28-211, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-211ENST00000530790 RHBDL1O75783 438 aa10.99□□□□□ -0.65
VPS28-211ENST00000530790 RPP14O95059 124 aaKnown RBP10.99□□□□□ -0.65
VPS28-211ENST00000530790 NRASP01111 189 aa10.99□□□□□ -0.65
VPS28-211ENST00000530790 IGHV1-69P01742 117 aa10.99□□□□□ -0.65
VPS28-211ENST00000530790 SELLP14151 372 aa10.99□□□□□ -0.65
VPS28-211ENST00000530790 ATP6V1E1P36543 226 aa10.99□□□□□ -0.65
VPS28-211ENST00000530790 TGM4P49221 684 aa10.99□□□□□ -0.65
VPS28-211ENST00000530790 DMRTC1Q5HYR2 192 aa10.99□□□□□ -0.65
VPS28-211ENST00000530790 CLVS2Q5SYC1 327 aa10.99□□□□□ -0.65
VPS28-211ENST00000530790 HAGHLQ6PII5 290 aaPredicted RBP10.99□□□□□ -0.65
VPS28-211ENST00000530790 SSX6Q7RTT6 188 aa10.99□□□□□ -0.65
VPS28-211ENST00000530790 VMO1Q7Z5L0 202 aa10.99□□□□□ -0.65
VPS28-211ENST00000530790 ELMOD2Q8IZ81 293 aa10.99□□□□□ -0.65
VPS28-211ENST00000530790 YIPF7Q8N8F6 280 aa10.99□□□□□ -0.65
VPS28-211ENST00000530790 ANGPTL6Q8NI99 470 aa10.99□□□□□ -0.65
VPS28-211ENST00000530790 ZNF671Q8TAW3 534 aa10.99□□□□□ -0.65
VPS28-211ENST00000530790 AQP3Q92482 292 aa10.99□□□□□ -0.65
VPS28-211ENST00000530790 RFKQ969G6 155 aa10.99□□□□□ -0.65
VPS28-211ENST00000530790 PPP1R14AQ96A00 147 aa10.99□□□□□ -0.65
VPS28-211ENST00000530790 TMIGD2Q96BF3 282 aa10.99□□□□□ -0.65
VPS28-211ENST00000530790 GAFA1Q96PS6 74 aa10.99□□□□□ -0.65
VPS28-211ENST00000530790 DCTN5Q9BTE1 182 aa10.99□□□□□ -0.65
VPS28-211ENST00000530790 PLEKHA1Q9HB21 404 aa10.99□□□□□ -0.65
VPS28-211ENST00000530790 NOX4Q9NPH5 578 aa10.99□□□□□ -0.65
VPS28-211ENST00000530790 ACOXLQ9NUZ1 547 aa10.99□□□□□ -0.65
VPS28-211ENST00000530790 IMPAD1Q9NX62 359 aa10.99□□□□□ -0.65
VPS28-211ENST00000530790 SLC25A10Q9UBX3 287 aaPredicted RBP10.99□□□□□ -0.65
VPS28-211ENST00000530790 A0A1W2PQL4 384 aaPredicted RBP10.98□□□□□ -0.65
VPS28-211ENST00000530790 DHRS7CA6NNS2 312 aa10.98□□□□□ -0.65
VPS28-211ENST00000530790 DLGAP1O14490 977 aa10.98□□□□□ -0.65
VPS28-211ENST00000530790 SIGLEC5O15389 551 aa10.98□□□□□ -0.65
VPS28-211ENST00000530790 APOL3O95236 402 aa10.98□□□□□ -0.65
VPS28-211ENST00000530790 TFF1P04155 84 aa10.98□□□□□ -0.65
VPS28-211ENST00000530790 OR2T7P0C7T2 308 aa10.98□□□□□ -0.65
VPS28-211ENST00000530790 AMY2BP19961 511 aa10.98□□□□□ -0.65
VPS28-211ENST00000530790 GABRA2P47869 451 aa10.98□□□□□ -0.65
VPS28-211ENST00000530790 TMED1Q13445 227 aa10.98□□□□□ -0.65
VPS28-211ENST00000530790 KPNB1Q14974 876 aaKnown RBP10.98□□□□□ -0.65
VPS28-211ENST00000530790 DGUOKQ16854 277 aa10.98□□□□□ -0.65
VPS28-211ENST00000530790 ZFP1Q6P2D0 407 aa10.98□□□□□ -0.65
VPS28-211ENST00000530790 ZNF788Q6ZQV5 615 aa10.98□□□□□ -0.65
VPS28-211ENST00000530790 FAM220AQ7Z4H9 259 aa10.98□□□□□ -0.65
VPS28-211ENST00000530790 LY6G5BQ8NDX9 201 aa10.98□□□□□ -0.65
VPS28-211ENST00000530790 OR10H4Q8NGA5 316 aa10.98□□□□□ -0.65
VPS28-211ENST00000530790 OR2T27Q8NH04 317 aa10.98□□□□□ -0.65
VPS28-211ENST00000530790 DMRTB1Q96MA1 342 aa10.98□□□□□ -0.65
VPS28-211ENST00000530790 PRDM13Q9H4Q3 707 aa10.98□□□□□ -0.65
VPS28-211ENST00000530790 GPR173Q9NS66 373 aa10.98□□□□□ -0.65
VPS28-211ENST00000530790 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.98□□□□□ -0.65
VPS28-211ENST00000530790 V9GYS6 101 aa10.98□□□□□ -0.65
VPS28-211ENST00000530790 A0A1W2PQ09 198 aa10.97□□□□□ -0.65
VPS28-211ENST00000530790 METTL15A6NJ78 407 aa10.97□□□□□ -0.65
VPS28-211ENST00000530790 J3QT63 122 aa10.97□□□□□ -0.65
VPS28-211ENST00000530790 EI24O14681 340 aa10.97□□□□□ -0.65
VPS28-211ENST00000530790 ALPLP05186 524 aa10.97□□□□□ -0.65
VPS28-211ENST00000530790 ACAA1P09110 424 aaPredicted RBP10.97□□□□□ -0.65
VPS28-211ENST00000530790 NDUFB7P17568 137 aa10.97□□□□□ -0.65
VPS28-211ENST00000530790 HAAOP46952 286 aa10.97□□□□□ -0.65
VPS28-211ENST00000530790 CAV3P56539 151 aa10.97□□□□□ -0.65
VPS28-211ENST00000530790 SMIM21Q3B7S5 101 aa10.97□□□□□ -0.65
VPS28-211ENST00000530790 TMEM42Q69YG0 159 aa10.97□□□□□ -0.65
VPS28-211ENST00000530790 Q6YL49 198 aa10.97□□□□□ -0.65
VPS28-211ENST00000530790 ZNF573Q86YE8 665 aa10.97□□□□□ -0.65
VPS28-211ENST00000530790 PDZD9Q8IXQ8 264 aa10.97□□□□□ -0.65
VPS28-211ENST00000530790 POC1AQ8NBT0 407 aa10.97□□□□□ -0.65
VPS28-211ENST00000530790 OR14K1Q8NGZ2 314 aa10.97□□□□□ -0.65
VPS28-211ENST00000530790 C8orf46Q8TAG6 207 aa10.97□□□□□ -0.65
VPS28-211ENST00000530790 EME1Q96AY2 570 aa10.97□□□□□ -0.65
VPS28-211ENST00000530790 TNFRSF19Q9NS68 423 aa10.97□□□□□ -0.65
VPS28-211ENST00000530790 RASL12Q9NYN1 266 aa10.97□□□□□ -0.65
VPS28-211ENST00000530790 SLC22A13Q9Y226 551 aa10.97□□□□□ -0.65
VPS28-211ENST00000530790 POLDIP2Q9Y2S7 368 aa10.97□□□□□ -0.65
VPS28-211ENST00000530790 PCDHGB1Q9Y5G3 927 aa10.97□□□□□ -0.65
VPS28-211ENST00000530790 DOCK11Q5JSL3 2073 aa10.97□□□□□ -0.65
VPS28-211ENST00000530790 IGKV1D-17A0A075B6S4 117 aa10.96□□□□□ -0.65
VPS28-211ENST00000530790 A0A1B0GTI1 187 aa10.96□□□□□ -0.65
VPS28-211ENST00000530790 ANKRD61A6NGH8 418 aa10.96□□□□□ -0.65
VPS28-211ENST00000530790 H3BNX3 289 aa10.96□□□□□ -0.65
VPS28-211ENST00000530790 SYT7O43581 403 aa10.96□□□□□ -0.65
VPS28-211ENST00000530790 SULT1C4O75897 302 aa10.96□□□□□ -0.65
VPS28-211ENST00000530790 MELTFP08582 738 aa10.96□□□□□ -0.65
VPS28-211ENST00000530790 PSG2P11465 335 aa10.96□□□□□ -0.65
VPS28-211ENST00000530790 CCL1P22362 96 aa10.96□□□□□ -0.65
VPS28-211ENST00000530790 ALDH3A2P51648 485 aa10.96□□□□□ -0.65
VPS28-211ENST00000530790 ACTC1P68032 377 aa10.96□□□□□ -0.65
VPS28-211ENST00000530790 ACTA1P68133 377 aa10.96□□□□□ -0.65
VPS28-211ENST00000530790 GUCA2AQ02747 115 aa10.96□□□□□ -0.65
VPS28-211ENST00000530790 ODF4Q2M2E3 257 aa10.96□□□□□ -0.65
VPS28-211ENST00000530790 C16orf87Q6PH81 154 aa10.96□□□□□ -0.65
VPS28-211ENST00000530790 CATSPERDQ86XM0 798 aa10.96□□□□□ -0.65
VPS28-211ENST00000530790 TMEM86BQ8N661 226 aa10.96□□□□□ -0.65
VPS28-211ENST00000530790 TMEM185AQ8NFB2 350 aa10.96□□□□□ -0.65
VPS28-211ENST00000530790 SSMEM1Q8WWF3 244 aa10.96□□□□□ -0.65
VPS28-211ENST00000530790 TRUB1Q8WWH5 349 aaKnown RBP10.96□□□□□ -0.65
VPS28-211ENST00000530790 SIRT7Q9NRC8 400 aa10.96□□□□□ -0.65
VPS28-211ENST00000530790 USE1Q9NZ43 259 aa10.96□□□□□ -0.65
VPS28-211ENST00000530790 GNG8Q9UK08 70 aa10.96□□□□□ -0.65
VPS28-211ENST00000530790 ZNF222Q9UK12 451 aa10.96□□□□□ -0.65
VPS28-211ENST00000530790 POMT1Q9Y6A1 747 aa10.96□□□□□ -0.65
VPS28-211ENST00000530790 TRBV23-1A0A0A0MS06 115 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms