RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 AQP3Q92482 292 aa12.09□□□□□ -0.47
CAPN1-219ENST00000530495 OTULINQ96BN8 352 aa12.09□□□□□ -0.47
CAPN1-219ENST00000530495 CDCA4Q9BXL8 241 aa12.09□□□□□ -0.47
CAPN1-219ENST00000530495 OR51V1Q9H2C8 321 aa12.09□□□□□ -0.47
CAPN1-219ENST00000530495 NIPAL2Q9H841 368 aa12.09□□□□□ -0.47
CAPN1-219ENST00000530495 ZNF702PQ9H963 129 aa12.09□□□□□ -0.47
CAPN1-219ENST00000530495 NECAP2Q9NVZ3 263 aa12.09□□□□□ -0.47
CAPN1-219ENST00000530495 VNN3Q9NY84 501 aa12.09□□□□□ -0.47
CAPN1-219ENST00000530495 ACTR3BQ9P1U1 418 aa12.09□□□□□ -0.47
CAPN1-219ENST00000530495 U3KQV3 271 aa12.09□□□□□ -0.47
CAPN1-219ENST00000530495 hCG_1809904A0A1W2PP81 198 aa12.08□□□□□ -0.48
CAPN1-219ENST00000530495 A0A1W2PPE2 198 aa12.08□□□□□ -0.48
CAPN1-219ENST00000530495 A0A1W2PR64 198 aa12.08□□□□□ -0.48
CAPN1-219ENST00000530495 A0A1W2PRV1 198 aa12.08□□□□□ -0.48
CAPN1-219ENST00000530495 FAM90A8PA6NJQ4 464 aa12.08□□□□□ -0.48
CAPN1-219ENST00000530495 FBXO24O75426 580 aa12.08□□□□□ -0.48
CAPN1-219ENST00000530495 CD28P10747 220 aa12.08□□□□□ -0.48
CAPN1-219ENST00000530495 PAICSP22234 425 aaKnown RBP12.08□□□□□ -0.48
CAPN1-219ENST00000530495 BMXP51813 675 aa12.08□□□□□ -0.48
CAPN1-219ENST00000530495 LGALS4P56470 323 aa12.08□□□□□ -0.48
CAPN1-219ENST00000530495 PSMA6P60900 246 aaKnown RBP12.08□□□□□ -0.48
CAPN1-219ENST00000530495 RPL31P62899 125 aaKnown RBP12.08□□□□□ -0.48
CAPN1-219ENST00000530495 NSUN5P1Q3KNT7 163 aa12.08□□□□□ -0.48
CAPN1-219ENST00000530495 CEP78Q5JTW2 689 aa12.08□□□□□ -0.48
CAPN1-219ENST00000530495 OR2T5Q6IEZ7 315 aa12.08□□□□□ -0.48
CAPN1-219ENST00000530495 CYP2R1Q6VVX0 501 aa12.08□□□□□ -0.48
CAPN1-219ENST00000530495 THAP5Q7Z6K1 395 aa12.08□□□□□ -0.48
CAPN1-219ENST00000530495 NDUFA11Q86Y39 141 aa12.08□□□□□ -0.48
CAPN1-219ENST00000530495 ZNF561Q8N587 486 aa12.08□□□□□ -0.48
CAPN1-219ENST00000530495 CD177Q8N6Q3 437 aa12.08□□□□□ -0.48
CAPN1-219ENST00000530495 OR2T29Q8NH02 315 aa12.08□□□□□ -0.48
CAPN1-219ENST00000530495 TEX47Q8TBZ9 253 aa12.08□□□□□ -0.48
CAPN1-219ENST00000530495 WIPF2Q8TF74 440 aaPredicted RBP12.08□□□□□ -0.48
CAPN1-219ENST00000530495 SGCDQ92629 289 aa12.08□□□□□ -0.48
CAPN1-219ENST00000530495 NKX3-1Q99801 234 aaPredicted RBP12.08□□□□□ -0.48
CAPN1-219ENST00000530495 NIPSNAP1Q9BPW8 284 aa12.08□□□□□ -0.48
CAPN1-219ENST00000530495 MMP28Q9H239 520 aa12.08□□□□□ -0.48
CAPN1-219ENST00000530495 MAGIXQ9H6Y5 334 aa12.08□□□□□ -0.48
CAPN1-219ENST00000530495 REEP1Q9H902 201 aa12.08□□□□□ -0.48
CAPN1-219ENST00000530495 USE1Q9NZ43 259 aa12.08□□□□□ -0.48
CAPN1-219ENST00000530495 SAMHD1Q9Y3Z3 626 aaKnown RBP12.08□□□□□ -0.48
CAPN1-219ENST00000530495 A0A0U1RQV5 110 aa12.07□□□□□ -0.48
CAPN1-219ENST00000530495 TCRBV5S2A0A599 114 aa12.07□□□□□ -0.48
CAPN1-219ENST00000530495 ACOD1A6NK06 481 aa12.07□□□□□ -0.48
CAPN1-219ENST00000530495 OR5B21A6NL26 309 aa12.07□□□□□ -0.48
CAPN1-219ENST00000530495 RFPL4AA6NLU0 287 aa12.07□□□□□ -0.48
CAPN1-219ENST00000530495 RFPL4AL1F8VTS6 287 aa12.07□□□□□ -0.48
CAPN1-219ENST00000530495 SELENOFO60613 162 aa12.07□□□□□ -0.48
CAPN1-219ENST00000530495 PRDX2P32119 198 aa12.07□□□□□ -0.48
CAPN1-219ENST00000530495 CAPZA1P52907 286 aa12.07□□□□□ -0.48
CAPN1-219ENST00000530495 ERVFRD-1P60508 538 aa12.07□□□□□ -0.48
CAPN1-219ENST00000530495 HABP2Q14520 560 aaPredicted RBP12.07□□□□□ -0.48
CAPN1-219ENST00000530495 HSP90B2PQ58FF3 399 aa12.07□□□□□ -0.48
CAPN1-219ENST00000530495 C16orf89Q6UX73 402 aa12.07□□□□□ -0.48
CAPN1-219ENST00000530495 CCBE1Q6UXH8 406 aaPredicted RBP12.07□□□□□ -0.48
CAPN1-219ENST00000530495 ACP7Q6ZNF0 438 aa12.07□□□□□ -0.48
CAPN1-219ENST00000530495 CALHM1Q8IU99 346 aa12.07□□□□□ -0.48
CAPN1-219ENST00000530495 DEFB107AQ8IZN7 70 aa12.07□□□□□ -0.48
CAPN1-219ENST00000530495 IQCF1Q8N6M8 205 aa12.07□□□□□ -0.48
CAPN1-219ENST00000530495 OR4F17Q8NGA8 305 aa12.07□□□□□ -0.48
CAPN1-219ENST00000530495 FAM81AQ8TBF8 368 aa12.07□□□□□ -0.48
CAPN1-219ENST00000530495 OR4F4Q96R69 305 aa12.07□□□□□ -0.48
CAPN1-219ENST00000530495 AURKAIP1Q9NWT8 199 aaPredicted RBP12.07□□□□□ -0.48
CAPN1-219ENST00000530495 NDE1Q9NXR1 346 aa12.07□□□□□ -0.48
CAPN1-219ENST00000530495 TAGLN3Q9UI15 199 aa12.07□□□□□ -0.48
CAPN1-219ENST00000530495 KLHDC2Q9Y2U9 406 aa12.07□□□□□ -0.48
CAPN1-219ENST00000530495 ADARB2-AS1A8MUL3 147 aa12.06□□□□□ -0.48
CAPN1-219ENST00000530495 PRR23D1E9PI22 279 aaPredicted RBP12.06□□□□□ -0.48
CAPN1-219ENST00000530495 SLC1A7O00341 560 aa12.06□□□□□ -0.48
CAPN1-219ENST00000530495 SNX3O60493 162 aa12.06□□□□□ -0.48
CAPN1-219ENST00000530495 PRR23D2P0DMB1 279 aaPredicted RBP12.06□□□□□ -0.48
CAPN1-219ENST00000530495 ATP6V1B1P15313 513 aa12.06□□□□□ -0.48
CAPN1-219ENST00000530495 ALOX5APP20292 161 aa12.06□□□□□ -0.48
CAPN1-219ENST00000530495 ATP6V1B2P21281 511 aa12.06□□□□□ -0.48
CAPN1-219ENST00000530495 RAB13P51153 203 aa12.06□□□□□ -0.48
CAPN1-219ENST00000530495 DMRTC1Q5HYR2 192 aa12.06□□□□□ -0.48
CAPN1-219ENST00000530495 PLBD1Q6P4A8 553 aa12.06□□□□□ -0.48
CAPN1-219ENST00000530495 HAGHLQ6PII5 290 aaPredicted RBP12.06□□□□□ -0.48
CAPN1-219ENST00000530495 LHFPL4Q7Z7J7 247 aa12.06□□□□□ -0.48
CAPN1-219ENST00000530495 DYNAPQ8N1N2 210 aa12.06□□□□□ -0.48
CAPN1-219ENST00000530495 POC1AQ8NBT0 407 aa12.06□□□□□ -0.48
CAPN1-219ENST00000530495 OR2T27Q8NH04 317 aa12.06□□□□□ -0.48
CAPN1-219ENST00000530495 R3HDM4Q96D70 268 aa12.06□□□□□ -0.48
CAPN1-219ENST00000530495 FEVQ99581 238 aa12.06□□□□□ -0.48
CAPN1-219ENST00000530495 CITED2Q99967 270 aaPredicted RBP12.06□□□□□ -0.48
CAPN1-219ENST00000530495 WNT10AQ9GZT5 417 aa12.06□□□□□ -0.48
CAPN1-219ENST00000530495 ARL8BQ9NVJ2 186 aa12.06□□□□□ -0.48
CAPN1-219ENST00000530495 TCF19Q9Y242 345 aa12.06□□□□□ -0.48
CAPN1-219ENST00000530495 NOTCH3Q9UM47 2321 aa12.05□□□□□ -0.48
CAPN1-219ENST00000530495 A6NDX4 124 aa12.05□□□□□ -0.48
CAPN1-219ENST00000530495 H3BN98 237 aa12.05□□□□□ -0.48
CAPN1-219ENST00000530495 PRODHO43272 600 aa12.05□□□□□ -0.48
CAPN1-219ENST00000530495 NOS1APO75052 506 aaPredicted RBP12.05□□□□□ -0.48
CAPN1-219ENST00000530495 CCL3L1P16619 93 aa12.05□□□□□ -0.48
CAPN1-219ENST00000530495 FAHP16930 419 aa12.05□□□□□ -0.48
CAPN1-219ENST00000530495 COX7A1P24310 79 aa12.05□□□□□ -0.48
CAPN1-219ENST00000530495 RIPPLY1Q0D2K3 151 aa12.05□□□□□ -0.48
CAPN1-219ENST00000530495 CNN3Q15417 329 aaKnown RBP12.05□□□□□ -0.48
CAPN1-219ENST00000530495 SMIM21Q3B7S5 101 aa12.05□□□□□ -0.48
CAPN1-219ENST00000530495 ZBTB37Q5TC79 503 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms