RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 MOB3CQ70IA8 216 aa16.89■□□□□ 0.29
TSPAN4-219ENST00000530404 COMMD2Q86X83 199 aa16.89■□□□□ 0.29
TSPAN4-219ENST00000530404 MKXQ8IYA7 352 aa16.89■□□□□ 0.29
TSPAN4-219ENST00000530404 CCDC124Q96CT7 223 aaKnown RBP16.89■□□□□ 0.29
TSPAN4-219ENST00000530404 CLPTM1LQ96KA5 538 aa16.89■□□□□ 0.29
TSPAN4-219ENST00000530404 ZNF488Q96MN9 340 aa16.89■□□□□ 0.29
TSPAN4-219ENST00000530404 CHID1Q9BWS9 393 aa16.89■□□□□ 0.29
TSPAN4-219ENST00000530404 LAMP5Q9UJQ1 280 aa16.89■□□□□ 0.29
TSPAN4-219ENST00000530404 SF3B6Q9Y3B4 125 aaKnown RBP16.89■□□□□ 0.29
TSPAN4-219ENST00000530404 MRPL3P09001 348 aaKnown RBP16.88■□□□□ 0.29
TSPAN4-219ENST00000530404 MAP2K3P46734 347 aa16.88■□□□□ 0.29
TSPAN4-219ENST00000530404 CEBPDP49716 269 aaPredicted RBP16.88■□□□□ 0.29
TSPAN4-219ENST00000530404 ERVFRD-1P60508 538 aa16.88■□□□□ 0.29
TSPAN4-219ENST00000530404 HERPUD1Q15011 391 aa16.88■□□□□ 0.29
TSPAN4-219ENST00000530404 CEACAM21Q3KPI0 293 aa16.88■□□□□ 0.29
TSPAN4-219ENST00000530404 TMEM236Q5W0B7 351 aa16.88■□□□□ 0.29
TSPAN4-219ENST00000530404 HAGHLQ6PII5 290 aaPredicted RBP16.88■□□□□ 0.29
TSPAN4-219ENST00000530404 BATF2Q8N1L9 274 aa16.88■□□□□ 0.29
TSPAN4-219ENST00000530404 PAPD5Q8NDF8 572 aaKnown RBP16.88■□□□□ 0.29
TSPAN4-219ENST00000530404 PPP1R14AQ96A00 147 aa16.88■□□□□ 0.29
TSPAN4-219ENST00000530404 NSL1Q96IY1 281 aa16.88■□□□□ 0.29
TSPAN4-219ENST00000530404 LRGUKQ96M69 825 aa16.88■□□□□ 0.29
TSPAN4-219ENST00000530404 FAM206AQ9NX38 181 aa16.88■□□□□ 0.29
TSPAN4-219ENST00000530404 PRR32B1ATL7 298 aa16.87■□□□□ 0.29
TSPAN4-219ENST00000530404 PRODHO43272 600 aa16.87■□□□□ 0.29
TSPAN4-219ENST00000530404 ALOX5APP20292 161 aa16.87■□□□□ 0.29
TSPAN4-219ENST00000530404 SLC2A5P22732 501 aa16.87■□□□□ 0.29
TSPAN4-219ENST00000530404 BMXP51813 675 aa16.87■□□□□ 0.29
TSPAN4-219ENST00000530404 MNAT1P51948 309 aa16.87■□□□□ 0.29
TSPAN4-219ENST00000530404 EFNB2P52799 333 aa16.87■□□□□ 0.29
TSPAN4-219ENST00000530404 CDK5Q00535 292 aa16.87■□□□□ 0.29
TSPAN4-219ENST00000530404 APOFQ13790 326 aa16.87■□□□□ 0.29
TSPAN4-219ENST00000530404 LRRC75BQ2VPJ9 315 aa16.87■□□□□ 0.29
TSPAN4-219ENST00000530404 PLCXD3Q63HM9 321 aa16.87■□□□□ 0.29
TSPAN4-219ENST00000530404 Q6ZTK2 550 aa16.87■□□□□ 0.29
TSPAN4-219ENST00000530404 TRPM8Q7Z2W7 1104 aa16.87■□□□□ 0.29
TSPAN4-219ENST00000530404 ADGRG5Q8IZF4 528 aa16.87■□□□□ 0.29
TSPAN4-219ENST00000530404 ARHGAP24Q8N264 748 aa16.87■□□□□ 0.29
TSPAN4-219ENST00000530404 OR5D13Q8NGL4 314 aa16.87■□□□□ 0.29
TSPAN4-219ENST00000530404 AQP3Q92482 292 aa16.87■□□□□ 0.29
TSPAN4-219ENST00000530404 TMEM269A0A1B0GVZ9 245 aa16.86■□□□□ 0.29
TSPAN4-219ENST00000530404 ARRDC5A6NEK1 342 aa16.86■□□□□ 0.29
TSPAN4-219ENST00000530404 RFPL4AA6NLU0 287 aa16.86■□□□□ 0.29
TSPAN4-219ENST00000530404 RFPL4AL1F8VTS6 287 aa16.86■□□□□ 0.29
TSPAN4-219ENST00000530404 GNGT2O14610 69 aa16.86■□□□□ 0.29
TSPAN4-219ENST00000530404 PRB2P02812 416 aaPredicted RBP16.86■□□□□ 0.29
TSPAN4-219ENST00000530404 FAHP16930 419 aa16.86■□□□□ 0.29
TSPAN4-219ENST00000530404 PRKACGP22612 351 aa16.86■□□□□ 0.29
TSPAN4-219ENST00000530404 ACP7Q6ZNF0 438 aa16.86■□□□□ 0.29
TSPAN4-219ENST00000530404 THAP5Q7Z6K1 395 aa16.86■□□□□ 0.29
TSPAN4-219ENST00000530404 LYG1Q8N1E2 194 aa16.86■□□□□ 0.29
TSPAN4-219ENST00000530404 CD177Q8N6Q3 437 aa16.86■□□□□ 0.29
TSPAN4-219ENST00000530404 KLHDC1Q8N7A1 406 aa16.86■□□□□ 0.29
TSPAN4-219ENST00000530404 OR4M1Q8NGD0 313 aa16.86■□□□□ 0.29
TSPAN4-219ENST00000530404 ZNF671Q8TAW3 534 aa16.86■□□□□ 0.29
TSPAN4-219ENST00000530404 OR51E1Q8TCB6 317 aa16.86■□□□□ 0.29
TSPAN4-219ENST00000530404 SDSLQ96GA7 329 aa16.86■□□□□ 0.29
TSPAN4-219ENST00000530404 PBOV1Q9GZY1 135 aa16.86■□□□□ 0.29
TSPAN4-219ENST00000530404 GPR84Q9NQS5 396 aa16.86■□□□□ 0.29
TSPAN4-219ENST00000530404 PIGLQ9Y2B2 252 aa16.86■□□□□ 0.29
TSPAN4-219ENST00000530404 TRBV23-1A0A0A0MS06 115 aa16.85■□□□□ 0.29
TSPAN4-219ENST00000530404 MEGF11A6BM72 1044 aa16.85■□□□□ 0.29
TSPAN4-219ENST00000530404 SYNGR1O43759 233 aa16.85■□□□□ 0.29
TSPAN4-219ENST00000530404 HMGN1P05114 100 aa16.85■□□□□ 0.29
TSPAN4-219ENST00000530404 OSMP13725 252 aa16.85■□□□□ 0.29
TSPAN4-219ENST00000530404 CCL3L1P16619 93 aa16.85■□□□□ 0.29
TSPAN4-219ENST00000530404 COX7A1P24310 79 aa16.85■□□□□ 0.29
TSPAN4-219ENST00000530404 SLC35D3Q5M8T2 416 aa16.85■□□□□ 0.29
TSPAN4-219ENST00000530404 CRIP3Q6Q6R5 217 aa16.85■□□□□ 0.29
TSPAN4-219ENST00000530404 OR5A2Q8NGI9 324 aa16.85■□□□□ 0.29
TSPAN4-219ENST00000530404 OR4C13Q8NGP0 309 aa16.85■□□□□ 0.29
TSPAN4-219ENST00000530404 CANT1Q8WVQ1 401 aa16.85■□□□□ 0.29
TSPAN4-219ENST00000530404 ASB9Q96DX5 294 aa16.85■□□□□ 0.29
TSPAN4-219ENST00000530404 TEAD3Q99594 435 aa16.85■□□□□ 0.29
TSPAN4-219ENST00000530404 MEGF9Q9H1U4 602 aa16.85■□□□□ 0.29
TSPAN4-219ENST00000530404 COPS3Q9UNS2 423 aa16.85■□□□□ 0.29
TSPAN4-219ENST00000530404 A0A0U1RQV5 110 aa16.84■□□□□ 0.29
TSPAN4-219ENST00000530404 ATP8B1O43520 1251 aa16.84■□□□□ 0.29
TSPAN4-219ENST00000530404 CHST1O43916 411 aa16.84■□□□□ 0.29
TSPAN4-219ENST00000530404 MTRF1O75570 445 aaKnown RBP16.84■□□□□ 0.29
TSPAN4-219ENST00000530404 VSIG10L2P0DP72 767 aa16.84■□□□□ 0.29
TSPAN4-219ENST00000530404 KIR2DS4P43632 304 aa16.84■□□□□ 0.29
TSPAN4-219ENST00000530404 MFGE8Q08431 387 aaPredicted RBP16.84■□□□□ 0.29
TSPAN4-219ENST00000530404 RIPPLY1Q0D2K3 151 aa16.84■□□□□ 0.29
TSPAN4-219ENST00000530404 GK3PQ14409 553 aa16.84■□□□□ 0.29
TSPAN4-219ENST00000530404 BEAN1Q3B7T3 259 aa16.84■□□□□ 0.29
TSPAN4-219ENST00000530404 PLA1AQ53H76 456 aa16.84■□□□□ 0.29
TSPAN4-219ENST00000530404 NKX3-1Q99801 234 aaPredicted RBP16.84■□□□□ 0.29
TSPAN4-219ENST00000530404 FAM234AQ9H0X4 552 aa16.84■□□□□ 0.29
TSPAN4-219ENST00000530404 NOTCH3Q9UM47 2321 aa16.84■□□□□ 0.29
TSPAN4-219ENST00000530404 CCDC182A6NF36 153 aa16.83■□□□□ 0.28
TSPAN4-219ENST00000530404 OR5B21A6NL26 309 aa16.83■□□□□ 0.28
TSPAN4-219ENST00000530404 GSC2O15499 205 aa16.83■□□□□ 0.28
TSPAN4-219ENST00000530404 IGLV3-1P01715 115 aa16.83■□□□□ 0.28
TSPAN4-219ENST00000530404 RPL31P62899 125 aaKnown RBP16.83■□□□□ 0.28
TSPAN4-219ENST00000530404 ZNF273Q14593 569 aa16.83■□□□□ 0.28
TSPAN4-219ENST00000530404 TMEM200BQ69YZ2 307 aa16.83■□□□□ 0.28
TSPAN4-219ENST00000530404 ZNF782Q6ZMW2 699 aaPredicted RBP16.83■□□□□ 0.28
TSPAN4-219ENST00000530404 KRT74Q7RTS7 529 aa16.83■□□□□ 0.28
TSPAN4-219ENST00000530404 LHFPL4Q7Z7J7 247 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms