RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 GEMIN6Q8WXD5 167 aaKnown RBP5.26□□□□□ -1.57
SVIP-204ENST00000530199 HIST1H2ACQ93077 130 aa5.26□□□□□ -1.57
SVIP-204ENST00000530199 LHX4Q969G2 390 aa5.26□□□□□ -1.57
SVIP-204ENST00000530199 CERS2Q96G23 380 aa5.26□□□□□ -1.57
SVIP-204ENST00000530199 OR8B2Q96RD0 313 aa5.26□□□□□ -1.57
SVIP-204ENST00000530199 RAB40CQ96S21 281 aa5.26□□□□□ -1.57
SVIP-204ENST00000530199 LITAFQ99732 161 aa5.26□□□□□ -1.57
SVIP-204ENST00000530199 BPIFA3Q9BQP9 254 aa5.26□□□□□ -1.57
SVIP-204ENST00000530199 DGCR6LQ9BY27 220 aa5.26□□□□□ -1.57
SVIP-204ENST00000530199 BCL2L14Q9BZR8 327 aa5.26□□□□□ -1.57
SVIP-204ENST00000530199 OR11A1Q9GZK7 315 aa5.26□□□□□ -1.57
SVIP-204ENST00000530199 GLIPR2Q9H4G4 154 aa5.26□□□□□ -1.57
SVIP-204ENST00000530199 ZNF702PQ9H963 129 aa5.26□□□□□ -1.57
SVIP-204ENST00000530199 CTPS2Q9NRF8 586 aa5.26□□□□□ -1.57
SVIP-204ENST00000530199 TAS2R7Q9NYW3 318 aa5.26□□□□□ -1.57
SVIP-204ENST00000530199 ERVK-18Q9QC07 812 aa5.26□□□□□ -1.57
SVIP-204ENST00000530199 CLN8Q9UBY8 286 aa5.26□□□□□ -1.57
SVIP-204ENST00000530199 DMBT1Q9UGM3 2413 aaPredicted RBP5.25□□□□□ -1.57
SVIP-204ENST00000530199 IQCMA0A1B0GVH7 501 aa5.25□□□□□ -1.57
SVIP-204ENST00000530199 MIF4GDA9UHW6 222 aaKnown RBP5.25□□□□□ -1.57
SVIP-204ENST00000530199 FBP2O00757 339 aa5.25□□□□□ -1.57
SVIP-204ENST00000530199 ZNF208O43345 1280 aa5.25□□□□□ -1.57
SVIP-204ENST00000530199 TNFSF12O43508 249 aa5.25□□□□□ -1.57
SVIP-204ENST00000530199 MTRF1O75570 445 aaKnown RBP5.25□□□□□ -1.57
SVIP-204ENST00000530199 SNAP29O95721 258 aa5.25□□□□□ -1.57
SVIP-204ENST00000530199 RAB36O95755 333 aa5.25□□□□□ -1.57
SVIP-204ENST00000530199 LY6G6CO95867 125 aa5.25□□□□□ -1.57
SVIP-204ENST00000530199 SERPINA5P05154 406 aa5.25□□□□□ -1.57
SVIP-204ENST00000530199 CD79AP11912 226 aa5.25□□□□□ -1.57
SVIP-204ENST00000530199 TSPAN8P19075 237 aa5.25□□□□□ -1.57
SVIP-204ENST00000530199 ERVS71-1P61550 626 aa5.25□□□□□ -1.57
SVIP-204ENST00000530199 CYCSP99999 105 aaKnown RBP5.25□□□□□ -1.57
SVIP-204ENST00000530199 RBBP4Q09028 425 aa5.25□□□□□ -1.57
SVIP-204ENST00000530199 HNRNPA0Q13151 305 aaKnown RBP5.25□□□□□ -1.57
SVIP-204ENST00000530199 SKP2Q13309 424 aa5.25□□□□□ -1.57
SVIP-204ENST00000530199 PMS2P3Q13401 168 aa5.25□□□□□ -1.57
SVIP-204ENST00000530199 CEACAM16Q2WEN9 425 aa5.25□□□□□ -1.57
SVIP-204ENST00000530199 SPANXN3Q5MJ09 141 aa5.25□□□□□ -1.57
SVIP-204ENST00000530199 CCNJQ5T5M9 372 aa5.25□□□□□ -1.57
SVIP-204ENST00000530199 METTL11BQ5VVY1 283 aa5.25□□□□□ -1.57
SVIP-204ENST00000530199 NIPAL3Q6P499 406 aa5.25□□□□□ -1.57
SVIP-204ENST00000530199 METAP1DQ6UB28 335 aaPredicted RBP5.25□□□□□ -1.57
SVIP-204ENST00000530199 SASS6Q6UVJ0 657 aa5.25□□□□□ -1.57
SVIP-204ENST00000530199 ZNF841Q6ZN19 808 aa5.25□□□□□ -1.57
SVIP-204ENST00000530199 GRINAQ7Z429 371 aa5.25□□□□□ -1.57
SVIP-204ENST00000530199 STAG3L4Q8TBR4 150 aa5.25□□□□□ -1.57
SVIP-204ENST00000530199 CCDC126Q96EE4 140 aa5.25□□□□□ -1.57
SVIP-204ENST00000530199 MED20Q9H944 212 aa5.25□□□□□ -1.57
SVIP-204ENST00000530199 POLE3Q9NRF9 147 aa5.25□□□□□ -1.57
SVIP-204ENST00000530199 AURKCQ9UQB9 309 aa5.25□□□□□ -1.57
SVIP-204ENST00000530199 TSSC4Q9Y5U2 329 aaPredicted RBP5.25□□□□□ -1.57
SVIP-204ENST00000530199 NUP214P35658 2090 aaPredicted RBP5.25□□□□□ -1.57
SVIP-204ENST00000530199 ARPC1BO15143 372 aaKnown RBP5.24□□□□□ -1.57
SVIP-204ENST00000530199 AKR7A3O95154 331 aa5.24□□□□□ -1.57
SVIP-204ENST00000530199 UBL3O95164 117 aa5.24□□□□□ -1.57
SVIP-204ENST00000530199 ZCCHC18P0CG32 403 aa5.24□□□□□ -1.57
SVIP-204ENST00000530199 CFC1BP0CG36 223 aa5.24□□□□□ -1.57
SVIP-204ENST00000530199 CFC1P0CG37 223 aa5.24□□□□□ -1.57
SVIP-204ENST00000530199 PRKACGP22612 351 aa5.24□□□□□ -1.57
SVIP-204ENST00000530199 P2RY4P51582 365 aa5.24□□□□□ -1.57
SVIP-204ENST00000530199 ATP12AP54707 1039 aa5.24□□□□□ -1.57
SVIP-204ENST00000530199 GABPB1Q06547 395 aaPredicted RBP5.24□□□□□ -1.57
SVIP-204ENST00000530199 RIGQ13278 110 aa5.24□□□□□ -1.57
SVIP-204ENST00000530199 TMEM255AQ5JRV8 349 aa5.24□□□□□ -1.57
SVIP-204ENST00000530199 TMEM225Q6GV28 225 aa5.24□□□□□ -1.57
SVIP-204ENST00000530199 ZNF730Q6ZMV8 503 aa5.24□□□□□ -1.57
SVIP-204ENST00000530199 RPP25LQ8N5L8 163 aaKnown RBP5.24□□□□□ -1.57
SVIP-204ENST00000530199 C11orf42Q8N5U0 333 aa5.24□□□□□ -1.57
SVIP-204ENST00000530199 ZNF614Q8N883 585 aa5.24□□□□□ -1.57
SVIP-204ENST00000530199 COX18Q8N8Q8 333 aa5.24□□□□□ -1.57
SVIP-204ENST00000530199 MINDY2Q8NBR6 621 aa5.24□□□□□ -1.57
SVIP-204ENST00000530199 FAM71CQ8NEG0 241 aa5.24□□□□□ -1.57
SVIP-204ENST00000530199 SLC7A13Q8TCU3 470 aa5.24□□□□□ -1.57
SVIP-204ENST00000530199 ARHGDIGQ99819 225 aa5.24□□□□□ -1.57
SVIP-204ENST00000530199 TMEM246Q9BRR3 403 aa5.24□□□□□ -1.57
SVIP-204ENST00000530199 NAT9Q9BTE0 207 aa5.24□□□□□ -1.57
SVIP-204ENST00000530199 DCTN5Q9BTE1 182 aa5.24□□□□□ -1.57
SVIP-204ENST00000530199 NMNAT2Q9BZQ4 307 aa5.24□□□□□ -1.57
SVIP-204ENST00000530199 SLC19A3Q9BZV2 496 aa5.24□□□□□ -1.57
SVIP-204ENST00000530199 TMEM231Q9H6L2 316 aa5.24□□□□□ -1.57
SVIP-204ENST00000530199 B3GAT2Q9NPZ5 323 aa5.24□□□□□ -1.57
SVIP-204ENST00000530199 NMRK1Q9NWW6 199 aa5.24□□□□□ -1.57
SVIP-204ENST00000530199 GIN1Q9NXP7 522 aa5.24□□□□□ -1.57
SVIP-204ENST00000530199 CACNG5Q9UF02 275 aa5.24□□□□□ -1.57
SVIP-204ENST00000530199 TBK1Q9UHD2 729 aa5.24□□□□□ -1.57
SVIP-204ENST00000530199 GAB2Q9UQC2 676 aa5.24□□□□□ -1.57
SVIP-204ENST00000530199 VPS13DQ5THJ4 4388 aa5.24□□□□□ -1.57
SVIP-204ENST00000530199 G3V2L1 256 aa5.23□□□□□ -1.57
SVIP-204ENST00000530199 H3BUX3 64 aa5.23□□□□□ -1.57
SVIP-204ENST00000530199 K7EQD1 137 aa5.23□□□□□ -1.57
SVIP-204ENST00000530199 IGF2P01344 180 aa5.23□□□□□ -1.57
SVIP-204ENST00000530199 ATP6V1C1P21283 382 aa5.23□□□□□ -1.57
SVIP-204ENST00000530199 GTF2E2P29084 291 aaKnown RBP5.23□□□□□ -1.57
SVIP-204ENST00000530199 ABCE1P61221 599 aaKnown RBP5.23□□□□□ -1.57
SVIP-204ENST00000530199 TNFAIP6P98066 277 aaPredicted RBP5.23□□□□□ -1.57
SVIP-204ENST00000530199 GLO1Q04760 184 aa5.23□□□□□ -1.57
SVIP-204ENST00000530199 IFT88Q13099 833 aa5.23□□□□□ -1.57
SVIP-204ENST00000530199 AANATQ16613 207 aa5.23□□□□□ -1.57
SVIP-204ENST00000530199 TMEM30BQ3MIR4 351 aa5.23□□□□□ -1.57
SVIP-204ENST00000530199 ZNF404Q494X3 552 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms