RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 LIPT2A6NK58 231 aa11.41□□□□□ -0.58
RBM39-243ENST00000528062 NPIPB4C9JG80 1138 aa11.41□□□□□ -0.58
RBM39-243ENST00000528062 RRP8O43159 456 aaKnown RBP11.41□□□□□ -0.58
RBM39-243ENST00000528062 SERPINA7P05543 415 aa11.41□□□□□ -0.58
RBM39-243ENST00000528062 ZNF17P17021 662 aa11.41□□□□□ -0.58
RBM39-243ENST00000528062 CX3CR1P49238 355 aa11.41□□□□□ -0.58
RBM39-243ENST00000528062 GSK3AP49840 483 aa11.41□□□□□ -0.58
RBM39-243ENST00000528062 PNLIPRP3Q17RR3 467 aa11.41□□□□□ -0.58
RBM39-243ENST00000528062 DEFB109BQ30KR1 87 aa11.41□□□□□ -0.58
RBM39-243ENST00000528062 ANKRD55Q3KP44 614 aa11.41□□□□□ -0.58
RBM39-243ENST00000528062 TMEM200AQ86VY9 491 aa11.41□□□□□ -0.58
RBM39-243ENST00000528062 NUBPLQ8TB37 319 aa11.41□□□□□ -0.58
RBM39-243ENST00000528062 THOC3Q96J01 351 aaKnown RBP11.41□□□□□ -0.58
RBM39-243ENST00000528062 NUDT16L1Q9BRJ7 211 aaKnown RBP11.41□□□□□ -0.58
RBM39-243ENST00000528062 MRPL13Q9BYD1 178 aaKnown RBP11.41□□□□□ -0.58
RBM39-243ENST00000528062 SERINC1Q9NRX5 453 aa11.41□□□□□ -0.58
RBM39-243ENST00000528062 NDRG3Q9UGV2 375 aa11.41□□□□□ -0.58
RBM39-243ENST00000528062 MRPS28Q9Y2Q9 187 aaKnown RBP11.41□□□□□ -0.58
RBM39-243ENST00000528062 USP24Q9UPU5 2620 aa11.41□□□□□ -0.58
RBM39-243ENST00000528062 F8W036 122 aa11.4□□□□□ -0.58
RBM39-243ENST00000528062 CDC14BO60729 498 aa11.4□□□□□ -0.58
RBM39-243ENST00000528062 OPN1LWP04000 364 aa11.4□□□□□ -0.58
RBM39-243ENST00000528062 HIST1H1DP16402 221 aaKnown RBP11.4□□□□□ -0.58
RBM39-243ENST00000528062 CDAP32320 146 aa11.4□□□□□ -0.58
RBM39-243ENST00000528062 TAS2R31P59538 309 aa11.4□□□□□ -0.58
RBM39-243ENST00000528062 BLOC1S1P78537 153 aa11.4□□□□□ -0.58
RBM39-243ENST00000528062 NAAAQ02083 359 aa11.4□□□□□ -0.58
RBM39-243ENST00000528062 AIMP2Q13155 320 aaKnown RBP11.4□□□□□ -0.58
RBM39-243ENST00000528062 HAGHLQ6PII5 290 aaPredicted RBP11.4□□□□□ -0.58
RBM39-243ENST00000528062 ST8SIA1Q92185 356 aa11.4□□□□□ -0.58
RBM39-243ENST00000528062 RAB3CQ96E17 227 aa11.4□□□□□ -0.58
RBM39-243ENST00000528062 TMEM41AQ96HV5 264 aa11.4□□□□□ -0.58
RBM39-243ENST00000528062 FER1L6-AS2Q96M78 137 aa11.4□□□□□ -0.58
RBM39-243ENST00000528062 RTBDNQ9BSG5 229 aaPredicted RBP11.4□□□□□ -0.58
RBM39-243ENST00000528062 MYOTQ9UBF9 498 aa11.4□□□□□ -0.58
RBM39-243ENST00000528062 CARHSP1Q9Y2V2 147 aaKnown RBP11.4□□□□□ -0.58
RBM39-243ENST00000528062 CEACAM18A8MTB9 384 aa11.4□□□□□ -0.58
RBM39-243ENST00000528062 SCGNO76038 276 aa11.4□□□□□ -0.58
RBM39-243ENST00000528062 SFT2D2O95562 160 aa11.4□□□□□ -0.58
RBM39-243ENST00000528062 ZNF20P17024 532 aa11.4□□□□□ -0.58
RBM39-243ENST00000528062 LAP3P28838 519 aa11.4□□□□□ -0.58
RBM39-243ENST00000528062 NPBWR1P48145 328 aa11.4□□□□□ -0.58
RBM39-243ENST00000528062 VAX1Q5SQQ9 334 aa11.4□□□□□ -0.58
RBM39-243ENST00000528062 SHEQ5VZ18 495 aa11.4□□□□□ -0.58
RBM39-243ENST00000528062 ABHD12BQ7Z5M8 362 aaPredicted RBP11.4□□□□□ -0.58
RBM39-243ENST00000528062 OR8B12Q8NGG6 310 aa11.4□□□□□ -0.58
RBM39-243ENST00000528062 OR51F2Q8NH61 342 aa11.4□□□□□ -0.58
RBM39-243ENST00000528062 RNF141Q8WVD5 230 aa11.4□□□□□ -0.58
RBM39-243ENST00000528062 ARL11Q969Q4 196 aa11.4□□□□□ -0.58
RBM39-243ENST00000528062 ARHGAP5-AS1Q96IT6 56 aa11.4□□□□□ -0.58
RBM39-243ENST00000528062 OR10C1Q96KK4 312 aa11.4□□□□□ -0.58
RBM39-243ENST00000528062 FLVCR1Q9Y5Y0 555 aa11.4□□□□□ -0.58
RBM39-243ENST00000528062 CNTRLQ7Z7A1 2325 aa11.4□□□□□ -0.58
RBM39-243ENST00000528062 PKD1L2Q7Z442 2459 aa11.4□□□□□ -0.58
RBM39-243ENST00000528062 H7C2Y5 167 aa11.39□□□□□ -0.59
RBM39-243ENST00000528062 OR2J2O76002 312 aa11.39□□□□□ -0.59
RBM39-243ENST00000528062 ZFAND5O76080 213 aa11.39□□□□□ -0.59
RBM39-243ENST00000528062 CHRM2P08172 466 aa11.39□□□□□ -0.59
RBM39-243ENST00000528062 APOBEC1P41238 236 aaKnown RBP11.39□□□□□ -0.59
RBM39-243ENST00000528062 SOX8P57073 446 aa11.39□□□□□ -0.59
RBM39-243ENST00000528062 GPR85P60893 370 aa11.39□□□□□ -0.59
RBM39-243ENST00000528062 ZNF468Q5VIY5 522 aaPredicted RBP11.39□□□□□ -0.59
RBM39-243ENST00000528062 NAA40Q86UY6 237 aa11.39□□□□□ -0.59
RBM39-243ENST00000528062 OR13G1Q8NGZ3 307 aa11.39□□□□□ -0.59
RBM39-243ENST00000528062 DEFB126Q9BYW3 111 aa11.39□□□□□ -0.59
RBM39-243ENST00000528062 SEC61A2Q9H9S3 476 aa11.39□□□□□ -0.59
RBM39-243ENST00000528062 ACKR4Q9NPB9 350 aa11.39□□□□□ -0.59
RBM39-243ENST00000528062 GPR84Q9NQS5 396 aa11.39□□□□□ -0.59
RBM39-243ENST00000528062 FAM96BQ9Y3D0 163 aa11.39□□□□□ -0.59
RBM39-243ENST00000528062 C5orf63A6NC05 138 aa11.39□□□□□ -0.59
RBM39-243ENST00000528062 GSTP1P09211 210 aaKnown RBP11.39□□□□□ -0.59
RBM39-243ENST00000528062 AADACL3Q5VUY0 350 aa11.39□□□□□ -0.59
RBM39-243ENST00000528062 DHRS7BQ6IAN0 325 aaPredicted RBP11.39□□□□□ -0.59
RBM39-243ENST00000528062 ZNF585AQ6P3V2 769 aa11.39□□□□□ -0.59
RBM39-243ENST00000528062 PGAP1Q75T13 922 aa11.39□□□□□ -0.59
RBM39-243ENST00000528062 COMMD2Q86X83 199 aa11.39□□□□□ -0.59
RBM39-243ENST00000528062 MISPQ8IVT2 679 aa11.39□□□□□ -0.59
RBM39-243ENST00000528062 FAM71F1Q96KD3 344 aaPredicted RBP11.39□□□□□ -0.59
RBM39-243ENST00000528062 IGKV1-9A0A0C4DH69 117 aa11.38□□□□□ -0.59
RBM39-243ENST00000528062 E9PLN8 166 aa11.38□□□□□ -0.59
RBM39-243ENST00000528062 SDCBPO00560 298 aaPredicted RBP11.38□□□□□ -0.59
RBM39-243ENST00000528062 MFNGO00587 321 aa11.38□□□□□ -0.59
RBM39-243ENST00000528062 LYL1P12980 280 aa11.38□□□□□ -0.59
RBM39-243ENST00000528062 ITGA3P26006 1051 aa11.38□□□□□ -0.59
RBM39-243ENST00000528062 ZNF121P58317 390 aaPredicted RBP11.38□□□□□ -0.59
RBM39-243ENST00000528062 CYCSP99999 105 aaKnown RBP11.38□□□□□ -0.59
RBM39-243ENST00000528062 C17orf67Q0P5P2 114 aa11.38□□□□□ -0.59
RBM39-243ENST00000528062 MYBPHQ13203 477 aa11.38□□□□□ -0.59
RBM39-243ENST00000528062 PRSS54Q6PEW0 395 aa11.38□□□□□ -0.59
RBM39-243ENST00000528062 DRAM2Q6UX65 266 aa11.38□□□□□ -0.59
RBM39-243ENST00000528062 PEG10Q86TG7 708 aaKnown RBP11.38□□□□□ -0.59
RBM39-243ENST00000528062 ARRDC1Q8N5I2 433 aa11.38□□□□□ -0.59
RBM39-243ENST00000528062 FDCSPQ8NFU4 85 aa11.38□□□□□ -0.59
RBM39-243ENST00000528062 MAFIPQ8WZ33 124 aa11.38□□□□□ -0.59
RBM39-243ENST00000528062 DDIT4LQ96D03 193 aa11.38□□□□□ -0.59
RBM39-243ENST00000528062 RASL10BQ96S79 203 aa11.38□□□□□ -0.59
RBM39-243ENST00000528062 TMEM59Q9BXS4 323 aa11.38□□□□□ -0.59
RBM39-243ENST00000528062 RAB18Q9NP72 206 aa11.38□□□□□ -0.59
RBM39-243ENST00000528062 TREM1Q9NP99 234 aa11.38□□□□□ -0.59
RBM39-243ENST00000528062 OR2S2Q9NQN1 319 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms