RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 A0A0U1RQV5 110 aa11.73□□□□□ -0.53
CAPN1-212ENST00000527887 A0A1B0GVI7 797 aa11.73□□□□□ -0.53
CAPN1-212ENST00000527887 SNTNA6NMZ2 147 aa11.73□□□□□ -0.53
CAPN1-212ENST00000527887 SLC1A7O00341 560 aa11.73□□□□□ -0.53
CAPN1-212ENST00000527887 NDUFB3O43676 98 aa11.73□□□□□ -0.53
CAPN1-212ENST00000527887 SELENOFO60613 162 aa11.73□□□□□ -0.53
CAPN1-212ENST00000527887 WBP4O75554 376 aaKnown RBP11.73□□□□□ -0.53
CAPN1-212ENST00000527887 IGHV1-69P01742 117 aa11.73□□□□□ -0.53
CAPN1-212ENST00000527887 SFTPBP07988 381 aa11.73□□□□□ -0.53
CAPN1-212ENST00000527887 SLC2A5P22732 501 aa11.73□□□□□ -0.53
CAPN1-212ENST00000527887 MAP2K3P46734 347 aa11.73□□□□□ -0.53
CAPN1-212ENST00000527887 RPL5P46777 297 aaKnown RBP11.73□□□□□ -0.53
CAPN1-212ENST00000527887 TGM4P49221 684 aa11.73□□□□□ -0.53
CAPN1-212ENST00000527887 RPS7P62081 194 aaKnown RBP11.73□□□□□ -0.53
CAPN1-212ENST00000527887 ARF6P62330 175 aa11.73□□□□□ -0.53
CAPN1-212ENST00000527887 HOXA4Q00056 320 aaPredicted RBP11.73□□□□□ -0.53
CAPN1-212ENST00000527887 PRDX4Q13162 271 aa11.73□□□□□ -0.53
CAPN1-212ENST00000527887 SNAPC1Q16533 368 aa11.73□□□□□ -0.53
CAPN1-212ENST00000527887 LRRC10Q5BKY1 277 aa11.73□□□□□ -0.53
CAPN1-212ENST00000527887 WDR38Q5JTN6 314 aa11.73□□□□□ -0.53
CAPN1-212ENST00000527887 LAIR2Q6ISS4 152 aa11.73□□□□□ -0.53
CAPN1-212ENST00000527887 ZNF773Q6PK81 442 aa11.73□□□□□ -0.53
CAPN1-212ENST00000527887 METAP1DQ6UB28 335 aaPredicted RBP11.73□□□□□ -0.53
CAPN1-212ENST00000527887 KRT77Q7Z794 578 aa11.73□□□□□ -0.53
CAPN1-212ENST00000527887 CMTM4Q8IZR5 234 aa11.73□□□□□ -0.53
CAPN1-212ENST00000527887 KIR3DL3Q8N743 410 aa11.73□□□□□ -0.53
CAPN1-212ENST00000527887 OR4F5Q8NH21 305 aa11.73□□□□□ -0.53
CAPN1-212ENST00000527887 ASB17Q8WXJ9 295 aa11.73□□□□□ -0.53
CAPN1-212ENST00000527887 ST8SIA4Q92187 359 aa11.73□□□□□ -0.53
CAPN1-212ENST00000527887 MED30Q96HR3 178 aa11.73□□□□□ -0.53
CAPN1-212ENST00000527887 TEAD3Q99594 435 aa11.73□□□□□ -0.53
CAPN1-212ENST00000527887 CCL13Q99616 98 aa11.73□□□□□ -0.53
CAPN1-212ENST00000527887 MROQ9BYG7 248 aa11.73□□□□□ -0.53
CAPN1-212ENST00000527887 BEX1Q9HBH7 125 aa11.73□□□□□ -0.53
CAPN1-212ENST00000527887 HAO2Q9NYQ3 351 aa11.73□□□□□ -0.53
CAPN1-212ENST00000527887 CNOT2Q9NZN8 540 aaKnown RBP11.73□□□□□ -0.53
CAPN1-212ENST00000527887 CAB39Q9Y376 341 aaPredicted RBP11.73□□□□□ -0.53
CAPN1-212ENST00000527887 TRRAPQ9Y4A5 3859 aa11.73□□□□□ -0.53
CAPN1-212ENST00000527887 SOX21Q9Y651 276 aaPredicted RBP11.73□□□□□ -0.53
CAPN1-212ENST00000527887 IGHV3OR15-7A0A075B7D8 119 aa11.72□□□□□ -0.53
CAPN1-212ENST00000527887 ZNF850A8MQ14 1090 aa11.72□□□□□ -0.53
CAPN1-212ENST00000527887 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.72□□□□□ -0.53
CAPN1-212ENST00000527887 SMIM18P0DKX4 95 aa11.72□□□□□ -0.53
CAPN1-212ENST00000527887 ACKR3P25106 362 aa11.72□□□□□ -0.53
CAPN1-212ENST00000527887 SLC35A2P78381 396 aa11.72□□□□□ -0.53
CAPN1-212ENST00000527887 ROM1Q03395 351 aa11.72□□□□□ -0.53
CAPN1-212ENST00000527887 ZBTB37Q5TC79 503 aa11.72□□□□□ -0.53
CAPN1-212ENST00000527887 LCN1P1Q5VSP4 162 aa11.72□□□□□ -0.53
CAPN1-212ENST00000527887 STUMQ69YW2 141 aa11.72□□□□□ -0.53
CAPN1-212ENST00000527887 C1orf122Q6ZSJ8 110 aa11.72□□□□□ -0.53
CAPN1-212ENST00000527887 ZDHHC23Q8IYP9 409 aa11.72□□□□□ -0.53
CAPN1-212ENST00000527887 OR8B12Q8NGG6 310 aa11.72□□□□□ -0.53
CAPN1-212ENST00000527887 PIGCQ92535 297 aa11.72□□□□□ -0.53
CAPN1-212ENST00000527887 LHX4Q969G2 390 aa11.72□□□□□ -0.53
CAPN1-212ENST00000527887 RNF170Q96K19 258 aa11.72□□□□□ -0.53
CAPN1-212ENST00000527887 MNTQ99583 582 aa11.72□□□□□ -0.53
CAPN1-212ENST00000527887 DNAJB11Q9UBS4 358 aa11.72□□□□□ -0.53
CAPN1-212ENST00000527887 LRP12Q9Y561 859 aa11.72□□□□□ -0.53
CAPN1-212ENST00000527887 DOCK11Q5JSL3 2073 aa11.72□□□□□ -0.53
CAPN1-212ENST00000527887 ZNF816-ZNF321PA0A0X1KG74 233 aa11.71□□□□□ -0.53
CAPN1-212ENST00000527887 MDFIC2A0A1B0GVS7 189 aa11.71□□□□□ -0.53
CAPN1-212ENST00000527887 TMEM269A0A1B0GVZ9 245 aa11.71□□□□□ -0.53
CAPN1-212ENST00000527887 IRGMA1A4Y4 181 aa11.71□□□□□ -0.53
CAPN1-212ENST00000527887 FAM181BA6NEQ2 426 aa11.71□□□□□ -0.53
CAPN1-212ENST00000527887 EFCAB10A6NFE3 127 aa11.71□□□□□ -0.53
CAPN1-212ENST00000527887 NKX6-3A6NJ46 265 aa11.71□□□□□ -0.53
CAPN1-212ENST00000527887 NDUFA7O95182 113 aa11.71□□□□□ -0.53
CAPN1-212ENST00000527887 TFAP2AP05549 437 aa11.71□□□□□ -0.53
CAPN1-212ENST00000527887 MELTFP08582 738 aa11.71□□□□□ -0.53
CAPN1-212ENST00000527887 PIPP12273 146 aaPredicted RBP11.71□□□□□ -0.53
CAPN1-212ENST00000527887 GNG3P63215 75 aa11.71□□□□□ -0.53
CAPN1-212ENST00000527887 GUCA2AQ02747 115 aa11.71□□□□□ -0.53
CAPN1-212ENST00000527887 POU4F2Q12837 409 aa11.71□□□□□ -0.53
CAPN1-212ENST00000527887 TMED1Q13445 227 aa11.71□□□□□ -0.53
CAPN1-212ENST00000527887 CEACAM21Q3KPI0 293 aa11.71□□□□□ -0.53
CAPN1-212ENST00000527887 TMEM236Q5W0B7 351 aa11.71□□□□□ -0.53
CAPN1-212ENST00000527887 KCTD8Q6ZWB6 473 aa11.71□□□□□ -0.53
CAPN1-212ENST00000527887 LDLRAD3Q86YD5 345 aa11.71□□□□□ -0.53
CAPN1-212ENST00000527887 ZNF679Q8IYX0 411 aa11.71□□□□□ -0.53
CAPN1-212ENST00000527887 SCCPDHQ8NBX0 429 aa11.71□□□□□ -0.53
CAPN1-212ENST00000527887 OR5A2Q8NGI9 324 aa11.71□□□□□ -0.53
CAPN1-212ENST00000527887 C8orf46Q8TAG6 207 aa11.71□□□□□ -0.53
CAPN1-212ENST00000527887 ZNF671Q8TAW3 534 aa11.71□□□□□ -0.53
CAPN1-212ENST00000527887 TMEM163Q8TC26 289 aa11.71□□□□□ -0.53
CAPN1-212ENST00000527887 APH1BQ8WW43 257 aa11.71□□□□□ -0.53
CAPN1-212ENST00000527887 DYRK2Q92630 601 aa11.71□□□□□ -0.53
CAPN1-212ENST00000527887 RFKQ969G6 155 aa11.71□□□□□ -0.53
CAPN1-212ENST00000527887 MYDGFQ969H8 173 aa11.71□□□□□ -0.53
CAPN1-212ENST00000527887 LYZL4Q96KX0 146 aa11.71□□□□□ -0.53
CAPN1-212ENST00000527887 DCTN5Q9BTE1 182 aa11.71□□□□□ -0.53
CAPN1-212ENST00000527887 VCX3AQ9NNX9 186 aa11.71□□□□□ -0.53
CAPN1-212ENST00000527887 MRPS18AQ9NVS2 196 aaKnown RBP11.71□□□□□ -0.53
CAPN1-212ENST00000527887 FKBP14Q9NWM8 211 aa11.71□□□□□ -0.53
CAPN1-212ENST00000527887 TVP23BQ9NYZ1 205 aa11.71□□□□□ -0.53
CAPN1-212ENST00000527887 PSORS1C1Q9UIG5 152 aa11.71□□□□□ -0.53
CAPN1-212ENST00000527887 A6NHS1 94 aa11.7□□□□□ -0.54
CAPN1-212ENST00000527887 OR5B21A6NL26 309 aa11.7□□□□□ -0.54
CAPN1-212ENST00000527887 MTRF1O75570 445 aaKnown RBP11.7□□□□□ -0.54
CAPN1-212ENST00000527887 FCN3O75636 299 aa11.7□□□□□ -0.54
CAPN1-212ENST00000527887 JUNBP17275 347 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms