RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 BMXP51813 675 aa19.1■□□□□ 0.65
CPSF1-202ENST00000527827 CEACAM21Q3KPI0 293 aa19.1■□□□□ 0.65
CPSF1-202ENST00000527827 DMRTC1Q5HYR2 192 aa19.1■□□□□ 0.65
CPSF1-202ENST00000527827 CEP78Q5JTW2 689 aa19.1■□□□□ 0.65
CPSF1-202ENST00000527827 LIAT1Q6ZQX7 453 aa19.1■□□□□ 0.65
CPSF1-202ENST00000527827 CD177Q8N6Q3 437 aa19.1■□□□□ 0.65
CPSF1-202ENST00000527827 ZNF454Q8N9F8 522 aa19.1■□□□□ 0.65
CPSF1-202ENST00000527827 TEX47Q8TBZ9 253 aa19.1■□□□□ 0.65
CPSF1-202ENST00000527827 AQP3Q92482 292 aa19.1■□□□□ 0.65
CPSF1-202ENST00000527827 FAM107BQ9H098 131 aa19.1■□□□□ 0.65
CPSF1-202ENST00000527827 MAGIXQ9H6Y5 334 aa19.1■□□□□ 0.65
CPSF1-202ENST00000527827 HEXA-AS1Q9H8Q6 139 aa19.1■□□□□ 0.65
CPSF1-202ENST00000527827 REEP1Q9H902 201 aa19.1■□□□□ 0.65
CPSF1-202ENST00000527827 ZNF702PQ9H963 129 aa19.1■□□□□ 0.65
CPSF1-202ENST00000527827 TAGLN3Q9UI15 199 aa19.1■□□□□ 0.65
CPSF1-202ENST00000527827 DNAH3Q8TD57 4116 aa19.1■□□□□ 0.65
CPSF1-202ENST00000527827 MTRF1O75570 445 aaKnown RBP19.09■□□□□ 0.65
CPSF1-202ENST00000527827 CAPZA1P52907 286 aa19.09■□□□□ 0.65
CPSF1-202ENST00000527827 ERVFRD-1P60508 538 aa19.09■□□□□ 0.65
CPSF1-202ENST00000527827 NSUN5P1Q3KNT7 163 aa19.09■□□□□ 0.65
CPSF1-202ENST00000527827 TMEM200BQ69YZ2 307 aa19.09■□□□□ 0.65
CPSF1-202ENST00000527827 C16orf89Q6UX73 402 aa19.09■□□□□ 0.65
CPSF1-202ENST00000527827 THAP5Q7Z6K1 395 aa19.09■□□□□ 0.65
CPSF1-202ENST00000527827 ZNF671Q8TAW3 534 aa19.09■□□□□ 0.65
CPSF1-202ENST00000527827 MRAPQ8TCY5 172 aa19.09■□□□□ 0.65
CPSF1-202ENST00000527827 SERTAD4Q9NUC0 356 aa19.09■□□□□ 0.65
CPSF1-202ENST00000527827 LRP12Q9Y561 859 aa19.09■□□□□ 0.65
CPSF1-202ENST00000527827 PAICSP22234 425 aaKnown RBP19.08■□□□□ 0.64
CPSF1-202ENST00000527827 MAP2K3P46734 347 aa19.08■□□□□ 0.64
CPSF1-202ENST00000527827 RPL31P62899 125 aaKnown RBP19.08■□□□□ 0.64
CPSF1-202ENST00000527827 HABP2Q14520 560 aaPredicted RBP19.08■□□□□ 0.64
CPSF1-202ENST00000527827 PLBD1Q6P4A8 553 aa19.08■□□□□ 0.64
CPSF1-202ENST00000527827 ACP7Q6ZNF0 438 aa19.08■□□□□ 0.64
CPSF1-202ENST00000527827 OR10G2Q8NGC3 310 aa19.08■□□□□ 0.64
CPSF1-202ENST00000527827 FAM81AQ8TBF8 368 aa19.08■□□□□ 0.64
CPSF1-202ENST00000527827 NKX3-1Q99801 234 aaPredicted RBP19.08■□□□□ 0.64
CPSF1-202ENST00000527827 MMP28Q9H239 520 aa19.08■□□□□ 0.64
CPSF1-202ENST00000527827 NIPAL2Q9H841 368 aa19.08■□□□□ 0.64
CPSF1-202ENST00000527827 MED4Q9NPJ6 270 aa19.08■□□□□ 0.64
CPSF1-202ENST00000527827 RASL12Q9NYN1 266 aa19.08■□□□□ 0.64
CPSF1-202ENST00000527827 RFPL4AA6NLU0 287 aa19.07■□□□□ 0.64
CPSF1-202ENST00000527827 RFPL4AL1F8VTS6 287 aa19.07■□□□□ 0.64
CPSF1-202ENST00000527827 H3BN98 237 aa19.07■□□□□ 0.64
CPSF1-202ENST00000527827 XPNPEP2O43895 674 aa19.07■□□□□ 0.64
CPSF1-202ENST00000527827 FBXO24O75426 580 aa19.07■□□□□ 0.64
CPSF1-202ENST00000527827 CD28P10747 220 aa19.07■□□□□ 0.64
CPSF1-202ENST00000527827 COX7A1P24310 79 aa19.07■□□□□ 0.64
CPSF1-202ENST00000527827 LOXL3P58215 753 aa19.07■□□□□ 0.64
CPSF1-202ENST00000527827 HAGHLQ6PII5 290 aaPredicted RBP19.07■□□□□ 0.64
CPSF1-202ENST00000527827 TRPM8Q7Z2W7 1104 aa19.07■□□□□ 0.64
CPSF1-202ENST00000527827 LHFPL4Q7Z7J7 247 aa19.07■□□□□ 0.64
CPSF1-202ENST00000527827 DYNAPQ8N1N2 210 aa19.07■□□□□ 0.64
CPSF1-202ENST00000527827 Q8N2B8 174 aa19.07■□□□□ 0.64
CPSF1-202ENST00000527827 DTX3Q8N9I9 347 aa19.07■□□□□ 0.64
CPSF1-202ENST00000527827 OR5A2Q8NGI9 324 aa19.07■□□□□ 0.64
CPSF1-202ENST00000527827 A0A0U1RQV5 110 aa19.06■□□□□ 0.64
CPSF1-202ENST00000527827 OR5B21A6NL26 309 aa19.06■□□□□ 0.64
CPSF1-202ENST00000527827 VGLL3A8MV65 326 aa19.06■□□□□ 0.64
CPSF1-202ENST00000527827 PRR23D1E9PI22 279 aaPredicted RBP19.06■□□□□ 0.64
CPSF1-202ENST00000527827 PRR23D2P0DMB1 279 aaPredicted RBP19.06■□□□□ 0.64
CPSF1-202ENST00000527827 CCL3L1P16619 93 aa19.06■□□□□ 0.64
CPSF1-202ENST00000527827 CCBE1Q6UXH8 406 aaPredicted RBP19.06■□□□□ 0.64
CPSF1-202ENST00000527827 MOB3CQ70IA8 216 aa19.06■□□□□ 0.64
CPSF1-202ENST00000527827 POC1AQ8NBT0 407 aa19.06■□□□□ 0.64
CPSF1-202ENST00000527827 OR4M1Q8NGD0 313 aa19.06■□□□□ 0.64
CPSF1-202ENST00000527827 WIPF2Q8TF74 440 aaPredicted RBP19.06■□□□□ 0.64
CPSF1-202ENST00000527827 ZNF488Q96MN9 340 aa19.06■□□□□ 0.64
CPSF1-202ENST00000527827 FEVQ99581 238 aa19.06■□□□□ 0.64
CPSF1-202ENST00000527827 FAM206AQ9NX38 181 aa19.06■□□□□ 0.64
CPSF1-202ENST00000527827 NDE1Q9NXR1 346 aa19.06■□□□□ 0.64
CPSF1-202ENST00000527827 FAM90A8PA6NJQ4 464 aa19.05■□□□□ 0.64
CPSF1-202ENST00000527827 ADARB2-AS1A8MUL3 147 aa19.05■□□□□ 0.64
CPSF1-202ENST00000527827 ALOX5APP20292 161 aa19.05■□□□□ 0.64
CPSF1-202ENST00000527827 HCCSP53701 268 aa19.05■□□□□ 0.64
CPSF1-202ENST00000527827 LGALS4P56470 323 aa19.05■□□□□ 0.64
CPSF1-202ENST00000527827 EMX1Q04741 257 aaPredicted RBP19.05■□□□□ 0.64
CPSF1-202ENST00000527827 ZNF273Q14593 569 aa19.05■□□□□ 0.64
CPSF1-202ENST00000527827 KRT77Q7Z794 578 aa19.05■□□□□ 0.64
CPSF1-202ENST00000527827 ZNF561Q8N587 486 aa19.05■□□□□ 0.64
CPSF1-202ENST00000527827 OR4S1Q8NGB4 309 aa19.05■□□□□ 0.64
CPSF1-202ENST00000527827 NECAP2Q9NVZ3 263 aa19.05■□□□□ 0.64
CPSF1-202ENST00000527827 AURKAIP1Q9NWT8 199 aaPredicted RBP19.05■□□□□ 0.64
CPSF1-202ENST00000527827 USE1Q9NZ43 259 aa19.05■□□□□ 0.64
CPSF1-202ENST00000527827 A0A1W2PPH5 198 aa19.04■□□□□ 0.64
CPSF1-202ENST00000527827 PRODHO43272 600 aa19.04■□□□□ 0.64
CPSF1-202ENST00000527827 IGLV3-1P01715 115 aa19.04■□□□□ 0.64
CPSF1-202ENST00000527827 PRDX2P32119 198 aa19.04■□□□□ 0.64
CPSF1-202ENST00000527827 CEBPDP49716 269 aaPredicted RBP19.04■□□□□ 0.64
CPSF1-202ENST00000527827 RAB13P51153 203 aa19.04■□□□□ 0.64
CPSF1-202ENST00000527827 GINS1Q14691 196 aa19.04■□□□□ 0.64
CPSF1-202ENST00000527827 SMIM21Q3B7S5 101 aa19.04■□□□□ 0.64
CPSF1-202ENST00000527827 PLA1AQ53H76 456 aa19.04■□□□□ 0.64
CPSF1-202ENST00000527827 LCN8Q6JVE9 175 aa19.04■□□□□ 0.64
CPSF1-202ENST00000527827 NDUFA11Q86Y39 141 aa19.04■□□□□ 0.64
CPSF1-202ENST00000527827 CPOQ8IVL8 374 aa19.04■□□□□ 0.64
CPSF1-202ENST00000527827 BBS1Q8NFJ9 593 aa19.04■□□□□ 0.64
CPSF1-202ENST00000527827 OR2T27Q8NH04 317 aa19.04■□□□□ 0.64
CPSF1-202ENST00000527827 GIPC3Q8TF64 312 aa19.04■□□□□ 0.64
CPSF1-202ENST00000527827 TCF19Q9Y242 345 aa19.04■□□□□ 0.64
CPSF1-202ENST00000527827 ACOD1A6NK06 481 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms