RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 NPIPB4C9JG80 1138 aa13.25□□□□□ -0.29
USP47-207ENST00000527733 CTAG2O75638 210 aa13.25□□□□□ -0.29
USP47-207ENST00000527733 CD3EP07766 207 aa13.25□□□□□ -0.29
USP47-207ENST00000527733 C20orf196Q8IYI0 205 aa13.25□□□□□ -0.29
USP47-207ENST00000527733 TMEM229BQ8NBD8 167 aa13.25□□□□□ -0.29
USP47-207ENST00000527733 MRPS24Q96EL2 167 aaKnown RBP13.25□□□□□ -0.29
USP47-207ENST00000527733 ARHGAP5-AS1Q96IT6 56 aa13.25□□□□□ -0.29
USP47-207ENST00000527733 SDHAF2Q9NX18 166 aa13.25□□□□□ -0.29
USP47-207ENST00000527733 ST6GALNAC2Q9UJ37 374 aa13.25□□□□□ -0.29
USP47-207ENST00000527733 TRAPPC2P0DI81 140 aa13.25□□□□□ -0.29
USP47-207ENST00000527733 TRAPPC2BP0DI82 140 aa13.25□□□□□ -0.29
USP47-207ENST00000527733 GK2Q14410 553 aaPredicted RBP13.25□□□□□ -0.29
USP47-207ENST00000527733 MICBQ29980 383 aa13.25□□□□□ -0.29
USP47-207ENST00000527733 TMEM91Q6ZNR0 172 aa13.25□□□□□ -0.29
USP47-207ENST00000527733 ARRDC1Q8N5I2 433 aa13.25□□□□□ -0.29
USP47-207ENST00000527733 TCTEX1D2Q8WW35 142 aa13.25□□□□□ -0.29
USP47-207ENST00000527733 SMIM3Q9BZL3 60 aa13.25□□□□□ -0.29
USP47-207ENST00000527733 SLA2Q9H6Q3 261 aa13.25□□□□□ -0.29
USP47-207ENST00000527733 NEUROG3Q9Y4Z2 214 aa13.25□□□□□ -0.29
USP47-207ENST00000527733 KLF4O43474 513 aa13.25□□□□□ -0.29
USP47-207ENST00000527733 IFNA1P01562 189 aa13.25□□□□□ -0.29
USP47-207ENST00000527733 PTAFRP25105 342 aa13.25□□□□□ -0.29
USP47-207ENST00000527733 RPS4XP62701 263 aaKnown RBP13.25□□□□□ -0.29
USP47-207ENST00000527733 ZNF519Q8TB69 540 aa13.25□□□□□ -0.29
USP47-207ENST00000527733 CYB5R1Q9UHQ9 305 aa13.25□□□□□ -0.29
USP47-207ENST00000527733 RFPL3SP0C7P2 107 aa13.24□□□□□ -0.29
USP47-207ENST00000527733 SPINK2P20155 84 aa13.24□□□□□ -0.29
USP47-207ENST00000527733 RHOUQ7L0Q8 258 aa13.24□□□□□ -0.29
USP47-207ENST00000527733 PRR7Q8TB68 274 aa13.24□□□□□ -0.29
USP47-207ENST00000527733 TICRRQ7Z2Z1 1910 aa13.24□□□□□ -0.29
USP47-207ENST00000527733 A0A0D9SG52 128 aa13.24□□□□□ -0.29
USP47-207ENST00000527733 ROM1Q03395 351 aa13.24□□□□□ -0.29
USP47-207ENST00000527733 ZNF468Q5VIY5 522 aaPredicted RBP13.24□□□□□ -0.29
USP47-207ENST00000527733 RFPL4BQ6ZWI9 263 aa13.24□□□□□ -0.29
USP47-207ENST00000527733 MDP1Q86V88 176 aa13.24□□□□□ -0.29
USP47-207ENST00000527733 TMEM200AQ86VY9 491 aa13.24□□□□□ -0.29
USP47-207ENST00000527733 FAM185AQ8N0U4 392 aa13.24□□□□□ -0.29
USP47-207ENST00000527733 OR4A16Q8NH70 328 aa13.24□□□□□ -0.29
USP47-207ENST00000527733 CCL21O00585 134 aa13.24□□□□□ -0.29
USP47-207ENST00000527733 MSTNO14793 375 aa13.24□□□□□ -0.29
USP47-207ENST00000527733 CYB5BO43169 146 aa13.24□□□□□ -0.29
USP47-207ENST00000527733 GLI4P10075 376 aa13.24□□□□□ -0.29
USP47-207ENST00000527733 NANOS3P60323 173 aaKnown RBP13.24□□□□□ -0.29
USP47-207ENST00000527733 CADM3Q8N126 398 aa13.24□□□□□ -0.29
USP47-207ENST00000527733 MARCH1Q8TCQ1 289 aa13.24□□□□□ -0.29
USP47-207ENST00000527733 LRFN3Q9BTN0 628 aa13.24□□□□□ -0.29
USP47-207ENST00000527733 ZNF436Q9C0F3 470 aaPredicted RBP13.24□□□□□ -0.29
USP47-207ENST00000527733 RNF32Q9H0A6 362 aa13.24□□□□□ -0.29
USP47-207ENST00000527733 MTFP1Q9UDX5 166 aa13.24□□□□□ -0.29
USP47-207ENST00000527733 CDC14BO60729 498 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 PDCD6O75340 191 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 AGFG2O95081 481 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 CD1AP06126 327 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 PTHLHP12272 177 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 SSTR2P30874 369 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 TNFAIP6P98066 277 aaPredicted RBP13.23□□□□□ -0.29
USP47-207ENST00000527733 TEX30Q5JUR7 227 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 SLC36A1Q7Z2H8 476 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 TERB2Q8NHR7 220 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 EDARADDQ8WWZ3 215 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 FAM210AQ96ND0 272 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 SCNM1Q9BWG6 230 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 FBXO7Q9Y3I1 522 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 TMEM30CPA0ZSE6 113 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 ABCD4O14678 606 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 PSG4Q00888 419 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 PDCD1Q15116 288 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 BEX5Q5H9J7 111 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 OR4D6Q8NGJ1 314 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 OR51A4Q8NGJ6 313 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 CXXC4Q9H2H0 198 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 TAAR3PQ9P1P4 343 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 LSM2Q9Y333 95 aaKnown RBP13.23□□□□□ -0.29
USP47-207ENST00000527733 SIRT4Q9Y6E7 314 aaPredicted RBP13.23□□□□□ -0.29
USP47-207ENST00000527733 M0R036 132 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 CYTIPO60759 359 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 MED6O75586 246 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 SIX6O95475 246 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 HTR2BP41595 481 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 OR2AK2Q8NG84 335 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 EIF5A2Q9GZV4 153 aaKnown RBP13.23□□□□□ -0.29
USP47-207ENST00000527733 ZNF703Q9H7S9 590 aaPredicted RBP13.23□□□□□ -0.29
USP47-207ENST00000527733 TRAV8-7A0A075B6U6 113 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 APOA2P02652 100 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 TTRP02766 147 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 IFNA4P05014 189 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 PI3P19957 117 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 SSX8Q7RTT4 187 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 OR4S1Q8NGB4 309 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 ZNF426Q9BUY5 554 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 SRXN1Q9BYN0 137 aa13.23□□□□□ -0.29
USP47-207ENST00000527733 RPA2P15927 270 aa13.22□□□□□ -0.29
USP47-207ENST00000527733 GPR12P47775 334 aa13.22□□□□□ -0.29
USP47-207ENST00000527733 MFSD4AQ8N468 514 aa13.22□□□□□ -0.29
USP47-207ENST00000527733 RFLNBQ8N5W9 214 aa13.22□□□□□ -0.29
USP47-207ENST00000527733 S1PR3Q99500 378 aa13.22□□□□□ -0.29
USP47-207ENST00000527733 FLVCR2Q9UPI3 526 aa13.22□□□□□ -0.29
USP47-207ENST00000527733 SEMA7AO75326 666 aa13.22□□□□□ -0.29
USP47-207ENST00000527733 CHRNB4P30926 498 aa13.22□□□□□ -0.29
USP47-207ENST00000527733 GPR157Q5UAW9 335 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms