RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 AIG1Q9NVV5 245 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 PAK1IP1Q9NWT1 392 aaPredicted RBP2.77□□□□□ -1.97
CD44-219ENST00000525685 TAS2R7Q9NYW3 318 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 TAS2R3Q9NYW6 316 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 STMN3Q9NZ72 180 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 SAMD4AQ9UPU9 718 aaKnown RBP2.77□□□□□ -1.97
CD44-219ENST00000525685 ZNF780BQ9Y6R6 833 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 EXPH5Q8NEV8 1989 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 AHCTF1Q8WYP5 2266 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 CACNA1BQ00975 2339 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 ACACAQ13085 2346 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 DOCK10Q96BY6 2186 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 MED13Q9UHV7 2174 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 LOC105371267A0A1B0GV96 52 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 PINLYPA6NC86 204 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 TCP11X1B4DZS4 312 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 HSBP1L1C9JCN9 74 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 E9PBE3 544 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 F8WDY8 70 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 UPK1AO00322 258 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 EDF1O60869 148 aaKnown RBP2.76□□□□□ -1.97
CD44-219ENST00000525685 SCN2BO60939 215 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 GPX5O75715 221 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 CRTAPO75718 401 aaPredicted RBP2.76□□□□□ -1.97
CD44-219ENST00000525685 DIRAS3O95661 229 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 IFI6P09912 130 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 OR8U8P0C7N1 319 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 ANXA8P13928 327 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 CTRB1P17538 263 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 PRPS1L1P21108 318 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 MPIP34949 423 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 RFC3P40938 356 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 PTGDSP41222 190 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 UQCRFS1P47985 274 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 HSPA13P48723 471 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 DNASE1L1P49184 302 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 MRPL19P49406 292 aaKnown RBP2.76□□□□□ -1.97
CD44-219ENST00000525685 TDGF1P3P51864 188 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 AQP5P55064 265 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 CARD18P57730 90 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 FBXW4P57775 412 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 PLCXD2Q0VAA5 305 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 ST3GAL3Q11203 375 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 ATXN7L3Q14CW9 347 aaPredicted RBP2.76□□□□□ -1.97
CD44-219ENST00000525685 AANATQ16613 207 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 NDUFA5Q16718 116 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 ZNF791Q3KP31 576 aaPredicted RBP2.76□□□□□ -1.97
CD44-219ENST00000525685 PIGGQ5H8A4 983 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 CPTPQ5TA50 214 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 LCE3AQ5TA76 89 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 ANXA8L1Q5VT79 327 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 PRAMEF20Q5VT98 475 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 CTRB2Q6GPI1 263 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 OR4F3Q6IEY1 312 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 SLC25A25Q6KCM7 469 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 OPN5Q6U736 354 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 EPGNQ6UW88 154 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 STAC2Q6ZMT1 411 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 RTL4Q6ZR62 310 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 CCDC121Q6ZUS5 278 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 DPY19L4Q7Z388 723 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 CLECL1Q8IZS7 167 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 SLC34A3Q8N130 599 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 OR2L13Q8N349 312 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 OR5AU1Q8NGC0 362 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 OR10G3Q8NGC4 313 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 OR8J2Q8NGG1 315 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 OR9I1Q8NGQ6 314 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 SFXN5Q8TD22 340 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 RNF138Q8WVD3 245 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 HGDQ93099 445 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 TESCQ96BS2 214 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 ZNF414Q96IQ9 312 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 CEP19Q96LK0 163 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 TEX37Q96LM6 180 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 NOL4LQ96MY1 436 aaPredicted RBP2.76□□□□□ -1.97
CD44-219ENST00000525685 MS4A4EQ96PG1 132 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 SIKE1Q9BRV8 207 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 NICN1Q9BSH3 213 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 C9orf16Q9BUW7 83 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 TTTY12Q9BZ98 90 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 DPY30Q9C005 99 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 ZNF385DQ9H6B1 395 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 CLMPQ9H6B4 373 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 SH2D2AQ9NP31 389 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 RPRD1BQ9NQG5 326 aaKnown RBP2.76□□□□□ -1.97
CD44-219ENST00000525685 PLSCR3Q9NRY6 295 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 FGFR1OP2Q9NVK5 253 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 ASF1BQ9NVP2 202 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 OR1A1Q9P1Q5 309 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 CD300AQ9UGN4 299 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 KLF13Q9Y2Y9 288 aaPredicted RBP2.76□□□□□ -1.97
CD44-219ENST00000525685 YARS2Q9Y2Z4 477 aaKnown RBP2.76□□□□□ -1.97
CD44-219ENST00000525685 MAB21L2Q9Y586 359 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 CHCHD2Q9Y6H1 151 aaPredicted RBP2.76□□□□□ -1.97
CD44-219ENST00000525685 U3KQV3 271 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 DMXL2Q8TDJ6 3036 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 ACACBO00763 2458 aa2.76□□□□□ -1.97
CD44-219ENST00000525685 C15orf38-AP3S2A0A0A6YYH1 394 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 A0A0G2JND7 137 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms