RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 FMODQ06828 376 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 FOXI1Q12951 378 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 LTB4RQ15722 352 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 TECRLQ5HYJ1 363 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 UBE2UQ5VVX9 321 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 OLFML2AQ68BL7 652 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 SUMO4Q6EEV6 95 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 ZNF774Q6NX45 483 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 C5orf46Q6UWT4 87 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 SKA3Q8IX90 412 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 SLC34A3Q8N130 599 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 STX19Q8N4C7 294 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 ZNF561Q8N587 486 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 ZNF676Q8N7Q3 588 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 ARIH2OSQ8N7S6 290 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 OR2Z1Q8NG97 314 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 OR10G3Q8NGC4 313 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 OR2A1Q8NGT9 310 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 OR4C3Q8NH37 302 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 OR10A6Q8NH74 314 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 OR2T6Q8NHC8 308 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 ZNF564Q8TBZ8 553 aaPredicted RBP3.67□□□□□ -1.82
CD44-213ENST00000525209 MAPK15Q8TD08 544 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 KCTD4Q8WVF5 259 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 FGF11Q92914 225 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 DDIT4LQ96D03 193 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 ZHX1-C8orf76Q96EF9 292 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 SEC22CQ9BRL7 303 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 TMED9Q9BVK6 235 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 FKRPQ9H9S5 495 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 MRPS18CQ9Y3D5 142 aaKnown RBP3.67□□□□□ -1.82
CD44-213ENST00000525209 NUBP2Q9Y5Y2 271 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 LMO7Q8WWI1 1683 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 SMG6Q86US8 1419 aaKnown RBP3.67□□□□□ -1.82
CD44-213ENST00000525209 CASP8AP2Q9UKL3 1982 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 PALLDQ8WX93 1383 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 TMEM272A0A1B0GTI8 110 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 FAM240AA0A1B0GVK7 77 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 LINC01553A4QN01 128 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 C15orf61A6NNL5 157 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 PHYHO14832 338 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 MGST3O14880 152 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 SLC2A10O95528 541 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 PMS2P2O95744 297 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 PEX11BO96011 259 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 PAK4O96013 591 aaPredicted RBP3.66□□□□□ -1.82
CD44-213ENST00000525209 APOC1P02654 83 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 FOLR1P15328 257 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 TAC1P20366 129 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 IGFBP5P24593 272 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 SHC1P29353 583 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 CHRNB4P30926 498 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 GDF5P43026 501 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 PFN3P60673 137 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 SNAP25P60880 206 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 BTN3A2P78410 334 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 GAGE5Q13069 117 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 GAGE6Q13070 117 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 GINS1Q14691 196 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 P2RY6Q15077 328 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 NECTIN1Q15223 517 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 TEAD2Q15562 447 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 TSNQ15631 228 aaKnown RBP3.66□□□□□ -1.82
CD44-213ENST00000525209 PARP15Q460N3 678 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 LIN52Q52LA3 116 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 HIST2H3PS2Q5TEC6 136 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 HECTD2Q5U5R9 776 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 CYB5R2Q6BCY4 276 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 CCDC71Q8IV32 467 aaPredicted RBP3.66□□□□□ -1.82
CD44-213ENST00000525209 GAPTQ8N292 157 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 ZNF114Q8NC26 417 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 PRSS33Q8NF86 280 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 SLC26A10Q8NG04 563 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 OR13D1Q8NGV5 346 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 OR51Q1Q8NH59 317 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 RFESDQ8TAC1 157 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 ASB17Q8WXJ9 295 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 ASB13Q8WXK3 278 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 FRAT1Q92837 279 aaPredicted RBP3.66□□□□□ -1.82
CD44-213ENST00000525209 YIPF5Q969M3 257 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 CPNE2Q96FN4 548 aaPredicted RBP3.66□□□□□ -1.82
CD44-213ENST00000525209 SSBP3Q9BWW4 388 aaPredicted RBP3.66□□□□□ -1.82
CD44-213ENST00000525209 ACTR6Q9GZN1 396 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 COA1Q9GZY4 146 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 HOXD1Q9GZZ0 328 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 MIXL1Q9H2W2 232 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 TXNIPQ9H3M7 391 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 METTL17Q9H7H0 456 aaPredicted RBP3.66□□□□□ -1.82
CD44-213ENST00000525209 EXOSC4Q9NPD3 245 aaKnown RBP3.66□□□□□ -1.82
CD44-213ENST00000525209 EXOSC3Q9NQT5 275 aaKnown RBP3.66□□□□□ -1.82
CD44-213ENST00000525209 COMMD9Q9P000 198 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 TMEM181Q9P2C4 612 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 SLC2A6Q9UGQ3 507 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 MLXQ9UH92 298 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 PRO0628Q9UI54 55 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 ZNF225Q9UK10 706 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 MOKQ9UQ07 419 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 VDAC3Q9Y277 283 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 TRAPPC4Q9Y296 219 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 ZNF256Q9Y2P7 627 aaPredicted RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms