RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 VPS13AQ96RL7 3174 aa9.69□□□□□ -0.86
HDAC9-228ENST00000524023 PMS2P1A4D2B8 440 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 MTRF1O75570 445 aaKnown RBP9.68□□□□□ -0.86
HDAC9-228ENST00000524023 KNG1P01042 644 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 APOC1P02654 83 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 UMODP07911 640 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 COX6A1P12074 109 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 ICAM2P13598 275 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 GABRR1P24046 479 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 SRSF3P84103 164 aaKnown RBP9.68□□□□□ -0.86
HDAC9-228ENST00000524023 GUCA2BQ16661 112 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 MST1LQ2TV78 715 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 SNAI3Q3KNW1 292 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 SVBPQ8N300 66 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 ZIC4Q8N9L1 334 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 CCDC54Q8NEL0 328 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 SEMA6DQ8NFY4 1073 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 OR4A4PQ8NGN8 299 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 SPTSSAQ969W0 71 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 NTNG2Q96CW9 530 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 FBXO17Q96EF6 278 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 IMMP1LQ96LU5 166 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 SLC5A7Q9GZV3 580 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 OR2S2Q9NQN1 319 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 MMP26Q9NRE1 261 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 PCDHB16Q9NRJ7 776 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 GSKIPQ9P0R6 139 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 ZNF629Q9UEG4 869 aaPredicted RBP9.68□□□□□ -0.86
HDAC9-228ENST00000524023 DHRS7CA6NNS2 312 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 G3V3Y1 287 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 RRP8O43159 456 aaKnown RBP9.68□□□□□ -0.86
HDAC9-228ENST00000524023 IFNA2P01563 188 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 SERPINA5P05154 406 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 ECI1P42126 302 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 SUCLG1P53597 346 aaKnown RBP9.68□□□□□ -0.86
HDAC9-228ENST00000524023 S100A10P60903 97 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 HLA-BQ31612 363 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 C10orf91Q5T1B1 145 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 TMEM200AQ86VY9 491 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 MAML2Q8IZL2 1156 aaPredicted RBP9.68□□□□□ -0.86
HDAC9-228ENST00000524023 ADAMTS17Q8TE56 1095 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 SGK3Q96BR1 496 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 INTS12Q96CB8 462 aaKnown RBP9.68□□□□□ -0.86
HDAC9-228ENST00000524023 ZNF837Q96EG3 531 aaPredicted RBP9.68□□□□□ -0.86
HDAC9-228ENST00000524023 Q96M66 194 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 JSRP1Q96MG2 331 aaPredicted RBP9.68□□□□□ -0.86
HDAC9-228ENST00000524023 ZNF2Q9BSG1 426 aaPredicted RBP9.68□□□□□ -0.86
HDAC9-228ENST00000524023 ULBP2Q9BZM5 246 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 ZNF700Q9H0M5 742 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 SH2D2AQ9NP31 389 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 GPR173Q9NS66 373 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 PLEKHJ1Q9NW61 149 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 C1orf123Q9NWV4 160 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 LPAR3Q9UBY5 353 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 DKKL1Q9UK85 242 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 MEMO1Q9Y316 297 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 ARID1AO14497 2285 aa9.68□□□□□ -0.86
HDAC9-228ENST00000524023 A0A0J9YW62 118 aa9.67□□□□□ -0.86
HDAC9-228ENST00000524023 ZNF705EA8MWA4 302 aaPredicted RBP9.67□□□□□ -0.86
HDAC9-228ENST00000524023 SFTPBP07988 381 aa9.67□□□□□ -0.86
HDAC9-228ENST00000524023 RBMXP38159 391 aaKnown RBP9.67□□□□□ -0.86
HDAC9-228ENST00000524023 SSR4P51571 173 aa9.67□□□□□ -0.86
HDAC9-228ENST00000524023 SCRN3Q0VDG4 424 aa9.67□□□□□ -0.86
HDAC9-228ENST00000524023 RBM39Q14498 530 aaKnown RBP9.67□□□□□ -0.86
HDAC9-228ENST00000524023 IL11RAQ14626 422 aa9.67□□□□□ -0.86
HDAC9-228ENST00000524023 EXT1Q16394 746 aa9.67□□□□□ -0.86
HDAC9-228ENST00000524023 RPUSD3Q6P087 351 aaKnown RBP9.67□□□□□ -0.86
HDAC9-228ENST00000524023 GALNTL5Q7Z4T8 443 aa9.67□□□□□ -0.86
HDAC9-228ENST00000524023 LDLRAD3Q86YD5 345 aa9.67□□□□□ -0.86
HDAC9-228ENST00000524023 C20orf196Q8IYI0 205 aa9.67□□□□□ -0.86
HDAC9-228ENST00000524023 NAT6Q93015 286 aa9.67□□□□□ -0.86
HDAC9-228ENST00000524023 CNTNAP3BQ96NU0 1288 aa9.67□□□□□ -0.86
HDAC9-228ENST00000524023 HDHD3Q9BSH5 251 aaPredicted RBP9.67□□□□□ -0.86
HDAC9-228ENST00000524023 ACKR4Q9NPB9 350 aa9.67□□□□□ -0.86
HDAC9-228ENST00000524023 PTRH2Q9Y3E5 179 aaKnown RBP9.67□□□□□ -0.86
HDAC9-228ENST00000524023 F8W036 122 aa9.67□□□□□ -0.86
HDAC9-228ENST00000524023 TNFSF11O14788 317 aa9.67□□□□□ -0.86
HDAC9-228ENST00000524023 MSTNO14793 375 aa9.67□□□□□ -0.86
HDAC9-228ENST00000524023 TAAR5O14804 337 aa9.67□□□□□ -0.86
HDAC9-228ENST00000524023 KLF7O75840 302 aaPredicted RBP9.67□□□□□ -0.86
HDAC9-228ENST00000524023 TMEM225BP0DP42 221 aa9.67□□□□□ -0.86
HDAC9-228ENST00000524023 ACKR3P25106 362 aa9.67□□□□□ -0.86
HDAC9-228ENST00000524023 MTCP1P56278 107 aa9.67□□□□□ -0.86
HDAC9-228ENST00000524023 RAC1P63000 192 aa9.67□□□□□ -0.86
HDAC9-228ENST00000524023 BLOC1S1P78537 153 aa9.67□□□□□ -0.86
HDAC9-228ENST00000524023 MRPS34P82930 218 aaKnown RBP9.67□□□□□ -0.86
HDAC9-228ENST00000524023 FAM27BQ5VT28 67 aa9.67□□□□□ -0.86
HDAC9-228ENST00000524023 IL34Q6ZMJ4 242 aa9.67□□□□□ -0.86
HDAC9-228ENST00000524023 SULF2Q8IWU5 870 aa9.67□□□□□ -0.86
HDAC9-228ENST00000524023 OR2AE1Q8NHA4 323 aa9.67□□□□□ -0.86
HDAC9-228ENST00000524023 M1APQ8TC57 530 aa9.67□□□□□ -0.86
HDAC9-228ENST00000524023 IFI44Q8TCB0 444 aa9.67□□□□□ -0.86
HDAC9-228ENST00000524023 WNT2BQ93097 391 aa9.67□□□□□ -0.86
HDAC9-228ENST00000524023 MR1Q95460 341 aa9.67□□□□□ -0.86
HDAC9-228ENST00000524023 SRXN1Q9BYN0 137 aa9.67□□□□□ -0.86
HDAC9-228ENST00000524023 CARHSP1Q9Y2V2 147 aaKnown RBP9.67□□□□□ -0.86
HDAC9-228ENST00000524023 HS3ST3B1Q9Y662 390 aa9.67□□□□□ -0.86
HDAC9-228ENST00000524023 DMDP11532 3685 aa9.66□□□□□ -0.86
HDAC9-228ENST00000524023 KLK3P07288 261 aaPredicted RBP9.66□□□□□ -0.86
HDAC9-228ENST00000524023 CTSDP07339 412 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms