RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 KLF8O95600 359 aaPredicted RBP7.4□□□□□ -1.22
CSMD1-213ENST00000523488 PGA3P0DJD8 388 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 KLK2P20151 261 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 HSD11B1P28845 292 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 GABRA4P48169 554 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 ARFRP1Q13795 201 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 PRSS8Q16651 343 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 TMEM52BQ4KMG9 183 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 WDR38Q5JTN6 314 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 TXNDC8Q6A555 127 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 TEX43Q6ZNM6 134 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 OR4N5Q8IXE1 308 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 ODF3L1Q8IXM7 274 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 OR2L3Q8NG85 312 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 OTOSQ8NHW6 89 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 CABLES2Q9BTV7 478 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 SRD5A3Q9H8P0 318 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 ELOVL3Q9HB03 270 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 G6PC2Q9NQR9 355 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 A6NIZ1 184 aa7.4□□□□□ -1.23
CSMD1-213ENST00000523488 SQSTM1Q13501 440 aa7.4□□□□□ -1.23
CSMD1-213ENST00000523488 SLC22A6Q4U2R8 563 aa7.4□□□□□ -1.23
CSMD1-213ENST00000523488 TMEM184AQ6ZMB5 413 aa7.4□□□□□ -1.23
CSMD1-213ENST00000523488 TMEM156Q8N614 296 aa7.4□□□□□ -1.23
CSMD1-213ENST00000523488 ZNF519Q8TB69 540 aa7.4□□□□□ -1.23
CSMD1-213ENST00000523488 C18orf12Q96KH6 178 aa7.4□□□□□ -1.23
CSMD1-213ENST00000523488 TAS2R4Q9NYW5 299 aa7.4□□□□□ -1.23
CSMD1-213ENST00000523488 C14orf166Q9Y224 244 aaKnown RBP7.4□□□□□ -1.23
CSMD1-213ENST00000523488 SLC22A13Q9Y226 551 aa7.4□□□□□ -1.23
CSMD1-213ENST00000523488 HEATR5AQ86XA9 2040 aa7.4□□□□□ -1.23
CSMD1-213ENST00000523488 RBFOX3A6NFN3 312 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 CCL1P22362 96 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 PPP1CCP36873 323 aaKnown RBP7.39□□□□□ -1.23
CSMD1-213ENST00000523488 CDKN2AP42771 156 aaKnown RBP7.39□□□□□ -1.23
CSMD1-213ENST00000523488 POLR2HP52434 150 aaKnown RBP7.39□□□□□ -1.23
CSMD1-213ENST00000523488 BTG2P78543 158 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 DCST2Q5T1A1 773 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 FAM90A2PQ658T7 463 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 SGPP2Q8IWX5 399 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 OR52N4Q8NGI2 321 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 OR2A1Q8NGT9 310 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 OR5H2Q8NGV7 314 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 C22orf15Q8WYQ4 148 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 FAM131CQ96AQ9 280 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 GPR173Q9NS66 373 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 CLEC4EQ9ULY5 219 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 XKRY2A2RUG3 117 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 CLDN34H7C241 214 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 XKRYO14609 159 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 TNFSF14O43557 240 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 PFN1P07737 140 aaKnown RBP7.39□□□□□ -1.23
CSMD1-213ENST00000523488 GALNSP34059 522 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 IGLV3-21P80748 117 aaPredicted RBP7.39□□□□□ -1.23
CSMD1-213ENST00000523488 ID2Q02363 134 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 ITPRIPL2Q3MIP1 535 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 ACTL10Q5JWF8 245 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 PLPP4Q5VZY2 271 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 ASCL4Q6XD76 172 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 LRRC25Q8N386 305 aaPredicted RBP7.39□□□□□ -1.23
CSMD1-213ENST00000523488 NRTNQ99748 197 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 ELOVL1Q9BW60 279 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 C6orf106Q9H6K1 298 aaPredicted RBP7.39□□□□□ -1.23
CSMD1-213ENST00000523488 A0A0A6YYD4 124 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 A6NCN8 305 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 H7C1C5 153 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 K7EQS6 105 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 WISP2O76076 250 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 RENP00797 406 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 AMY2BP19961 511 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 CTXN1P60606 82 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 LCN6P62502 163 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 GABREP78334 506 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 BTN3A2P78410 334 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 PRDX1Q06830 199 aaKnown RBP7.39□□□□□ -1.23
CSMD1-213ENST00000523488 MFGE8Q08431 387 aaPredicted RBP7.39□□□□□ -1.23
CSMD1-213ENST00000523488 RUNX2Q13950 521 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 SLC17A1Q14916 467 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 LRRC69Q6ZNQ3 347 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 ADIPOR2Q86V24 386 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 ZNF248Q8NDW4 579 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 MRGPRX4Q96LA9 322 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 VN1R3Q9BXE9 311 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 WSB1Q9Y6I7 421 aa7.39□□□□□ -1.23
CSMD1-213ENST00000523488 GPR137BO60478 399 aa7.38□□□□□ -1.23
CSMD1-213ENST00000523488 GNB3P16520 340 aa7.38□□□□□ -1.23
CSMD1-213ENST00000523488 CD82P27701 267 aa7.38□□□□□ -1.23
CSMD1-213ENST00000523488 CCKARP32238 428 aa7.38□□□□□ -1.23
CSMD1-213ENST00000523488 GPR18Q14330 331 aa7.38□□□□□ -1.23
CSMD1-213ENST00000523488 DEGS2Q6QHC5 323 aa7.38□□□□□ -1.23
CSMD1-213ENST00000523488 ERN2Q76MJ5 926 aaKnown RBP7.38□□□□□ -1.23
CSMD1-213ENST00000523488 CMTM8Q8IZV2 173 aa7.38□□□□□ -1.23
CSMD1-213ENST00000523488 OR4D5Q8NGN0 318 aa7.38□□□□□ -1.23
CSMD1-213ENST00000523488 OR1P1Q8NH06 330 aa7.38□□□□□ -1.23
CSMD1-213ENST00000523488 TMEM170AQ8WVE7 144 aa7.38□□□□□ -1.23
CSMD1-213ENST00000523488 TPSD1Q9BZJ3 242 aa7.38□□□□□ -1.23
CSMD1-213ENST00000523488 MSL2Q9HCI7 577 aa7.38□□□□□ -1.23
CSMD1-213ENST00000523488 LYRM4Q9HD34 91 aa7.38□□□□□ -1.23
CSMD1-213ENST00000523488 GRHPRQ9UBQ7 328 aa7.38□□□□□ -1.23
CSMD1-213ENST00000523488 PTPRZ1P23471 2315 aaPredicted RBP7.38□□□□□ -1.23
CSMD1-213ENST00000523488 IGLV1-36A0A0B4J1U3 117 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms