RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 SCMH1Q96GD3 660 aa14.46□□□□□ -0.09
USP42-207ENST00000521713 FLVCR1Q9Y5Y0 555 aa14.46□□□□□ -0.09
USP42-207ENST00000521713 CT45A6P0DMU7 189 aa14.46□□□□□ -0.09
USP42-207ENST00000521713 CT45A5P0DMU8 189 aa14.46□□□□□ -0.09
USP42-207ENST00000521713 CT45A7P0DMV0 189 aa14.46□□□□□ -0.09
USP42-207ENST00000521713 CT45A8P0DMV1 189 aa14.46□□□□□ -0.09
USP42-207ENST00000521713 CT45A9P0DMV2 189 aa14.46□□□□□ -0.09
USP42-207ENST00000521713 FUT6P51993 359 aa14.46□□□□□ -0.09
USP42-207ENST00000521713 CT45A2Q5DJT8 189 aa14.46□□□□□ -0.09
USP42-207ENST00000521713 CT45A1Q5HYN5 189 aa14.46□□□□□ -0.09
USP42-207ENST00000521713 CT45A3Q8NHU0 189 aa14.46□□□□□ -0.09
USP42-207ENST00000521713 VSTM2LQ96N03 204 aa14.46□□□□□ -0.09
USP42-207ENST00000521713 PTDSS2Q9BVG9 487 aa14.46□□□□□ -0.09
USP42-207ENST00000521713 DOCK3Q8IZD9 2030 aa14.46□□□□□ -0.09
USP42-207ENST00000521713 TCRBV16S1A1N1A0A5B0 115 aa14.46□□□□□ -0.1
USP42-207ENST00000521713 BMP5P22003 454 aa14.46□□□□□ -0.1
USP42-207ENST00000521713 THBS4P35443 961 aa14.46□□□□□ -0.1
USP42-207ENST00000521713 CRYBB2P43320 205 aa14.46□□□□□ -0.1
USP42-207ENST00000521713 FUT7Q11130 342 aa14.46□□□□□ -0.1
USP42-207ENST00000521713 PNLIPRP3Q17RR3 467 aa14.46□□□□□ -0.1
USP42-207ENST00000521713 PET117Q6UWS5 81 aa14.46□□□□□ -0.1
USP42-207ENST00000521713 C16orf47Q6ZP98 133 aaPredicted RBP14.46□□□□□ -0.1
USP42-207ENST00000521713 OR2W3Q7Z3T1 314 aa14.46□□□□□ -0.1
USP42-207ENST00000521713 UBAC2Q8NBM4 344 aa14.46□□□□□ -0.1
USP42-207ENST00000521713 RDH5Q92781 318 aa14.46□□□□□ -0.1
USP42-207ENST00000521713 CORO2AQ92828 525 aa14.46□□□□□ -0.1
USP42-207ENST00000521713 LHX4Q969G2 390 aa14.46□□□□□ -0.1
USP42-207ENST00000521713 RHNO1Q9BSD3 238 aa14.46□□□□□ -0.1
USP42-207ENST00000521713 SEC14L6B5MCN3 397 aa14.46□□□□□ -0.1
USP42-207ENST00000521713 CYR61O00622 381 aa14.46□□□□□ -0.1
USP42-207ENST00000521713 ACTL6AO96019 429 aa14.46□□□□□ -0.1
USP42-207ENST00000521713 RD3LP0DJH9 198 aa14.46□□□□□ -0.1
USP42-207ENST00000521713 DHODHQ02127 395 aa14.46□□□□□ -0.1
USP42-207ENST00000521713 ARHGEF39Q8N4T4 335 aa14.46□□□□□ -0.1
USP42-207ENST00000521713 FBXW5Q969U6 566 aa14.46□□□□□ -0.1
USP42-207ENST00000521713 CHRDL1Q9BU40 450 aa14.46□□□□□ -0.1
USP42-207ENST00000521713 HES7Q9BYE0 225 aa14.46□□□□□ -0.1
USP42-207ENST00000521713 FABP9Q0Z7S8 132 aa14.45□□□□□ -0.1
USP42-207ENST00000521713 DEGS2Q6QHC5 323 aa14.45□□□□□ -0.1
USP42-207ENST00000521713 SLC25A26Q70HW3 274 aa14.45□□□□□ -0.1
USP42-207ENST00000521713 MRGPREQ86SM8 312 aa14.45□□□□□ -0.1
USP42-207ENST00000521713 SUMF1Q8NBK3 374 aa14.45□□□□□ -0.1
USP42-207ENST00000521713 ZNF2Q9BSG1 426 aaPredicted RBP14.45□□□□□ -0.1
USP42-207ENST00000521713 PARP12Q9H0J9 701 aaKnown RBP14.45□□□□□ -0.1
USP42-207ENST00000521713 CACFD1Q9UGQ2 172 aa14.45□□□□□ -0.1
USP42-207ENST00000521713 GPR31O00270 319 aa14.45□□□□□ -0.1
USP42-207ENST00000521713 TERTO14746 1132 aaKnown RBP14.45□□□□□ -0.1
USP42-207ENST00000521713 EPHA2P29317 976 aa14.45□□□□□ -0.1
USP42-207ENST00000521713 HAAOP46952 286 aa14.45□□□□□ -0.1
USP42-207ENST00000521713 NPBWR1P48145 328 aa14.45□□□□□ -0.1
USP42-207ENST00000521713 TIAL1Q01085 375 aaKnown RBP eCLIP14.45□□□□□ -0.1
USP42-207ENST00000521713 GUK1Q16774 197 aa14.45□□□□□ -0.1
USP42-207ENST00000521713 DNASE2BQ8WZ79 361 aa14.45□□□□□ -0.1
USP42-207ENST00000521713 AKR1E2Q96JD6 320 aa14.45□□□□□ -0.1
USP42-207ENST00000521713 ARFGEF1Q9Y6D6 1849 aa14.45□□□□□ -0.1
USP42-207ENST00000521713 OR8U8P0C7N1 319 aa14.45□□□□□ -0.1
USP42-207ENST00000521713 RPA2P15927 270 aa14.45□□□□□ -0.1
USP42-207ENST00000521713 SOX8P57073 446 aa14.45□□□□□ -0.1
USP42-207ENST00000521713 IGSF11Q5DX21 431 aa14.45□□□□□ -0.1
USP42-207ENST00000521713 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.45□□□□□ -0.1
USP42-207ENST00000521713 ZNF230Q9UIE0 474 aaPredicted RBP14.45□□□□□ -0.1
USP42-207ENST00000521713 CDAP32320 146 aa14.44□□□□□ -0.1
USP42-207ENST00000521713 TIPARPQ7Z3E1 657 aaKnown RBP14.44□□□□□ -0.1
USP42-207ENST00000521713 UBE3DQ7Z6J8 389 aa14.44□□□□□ -0.1
USP42-207ENST00000521713 OR10D4PQ8NGN7 298 aa14.44□□□□□ -0.1
USP42-207ENST00000521713 ZG16BQ96DA0 208 aa14.44□□□□□ -0.1
USP42-207ENST00000521713 FBXO17Q96EF6 278 aa14.44□□□□□ -0.1
USP42-207ENST00000521713 S1PR3Q99500 378 aa14.44□□□□□ -0.1
USP42-207ENST00000521713 FAM234AQ9H0X4 552 aa14.44□□□□□ -0.1
USP42-207ENST00000521713 HEYLQ9NQ87 328 aaPredicted RBP14.44□□□□□ -0.1
USP42-207ENST00000521713 ING1Q9UK53 422 aaPredicted RBP14.44□□□□□ -0.1
USP42-207ENST00000521713 PYCARD-AS1I3L0S3 204 aa14.44□□□□□ -0.1
USP42-207ENST00000521713 SIRPB1O00241 398 aa14.44□□□□□ -0.1
USP42-207ENST00000521713 PCBP3P57721 371 aaKnown RBP14.44□□□□□ -0.1
USP42-207ENST00000521713 ST3GAL2Q16842 350 aa14.44□□□□□ -0.1
USP42-207ENST00000521713 SPINK14Q6IE38 97 aa14.44□□□□□ -0.1
USP42-207ENST00000521713 TMEM108Q6UXF1 575 aa14.44□□□□□ -0.1
USP42-207ENST00000521713 PLA2G12AQ9BZM1 189 aa14.44□□□□□ -0.1
USP42-207ENST00000521713 YTHDF2Q9Y5A9 579 aaKnown RBP14.44□□□□□ -0.1
USP42-207ENST00000521713 AP4M1O00189 453 aa14.44□□□□□ -0.1
USP42-207ENST00000521713 TMIGD3P0DMS9 266 aaPredicted RBP14.44□□□□□ -0.1
USP42-207ENST00000521713 HMGA2P52926 109 aa14.44□□□□□ -0.1
USP42-207ENST00000521713 DCAF10Q5QP82 559 aa14.44□□□□□ -0.1
USP42-207ENST00000521713 TMEM123Q8N131 208 aa14.44□□□□□ -0.1
USP42-207ENST00000521713 RXFP4Q8TDU9 374 aa14.44□□□□□ -0.1
USP42-207ENST00000521713 FGF11Q92914 225 aa14.44□□□□□ -0.1
USP42-207ENST00000521713 SPSB1Q96BD6 273 aa14.44□□□□□ -0.1
USP42-207ENST00000521713 SAT2Q96F10 170 aaPredicted RBP14.44□□□□□ -0.1
USP42-207ENST00000521713 VAMP8Q9BV40 100 aa14.44□□□□□ -0.1
USP42-207ENST00000521713 FBXO34Q9NWN3 711 aa14.44□□□□□ -0.1
USP42-207ENST00000521713 SCN10AQ9Y5Y9 1956 aa14.44□□□□□ -0.1
USP42-207ENST00000521713 OR2M5A3KFT3 312 aa14.44□□□□□ -0.1
USP42-207ENST00000521713 SP9P0CG40 484 aa14.44□□□□□ -0.1
USP42-207ENST00000521713 RAB33BQ9H082 229 aa14.44□□□□□ -0.1
USP42-207ENST00000521713 K7EQM0 130 aa14.43□□□□□ -0.1
USP42-207ENST00000521713 TIGITQ495A1 244 aa14.43□□□□□ -0.1
USP42-207ENST00000521713 CBLN3Q6UW01 205 aa14.43□□□□□ -0.1
USP42-207ENST00000521713 SLC35G3Q8N808 338 aa14.43□□□□□ -0.1
USP42-207ENST00000521713 BVESQ8NE79 360 aa14.43□□□□□ -0.1
USP42-207ENST00000521713 SLC39A7Q92504 469 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms