RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 A0A1W2PPE2 198 aa12.09□□□□□ -0.47
PRKDC-204ENST00000521331 A0A1W2PR64 198 aa12.09□□□□□ -0.47
PRKDC-204ENST00000521331 A0A1W2PRV1 198 aa12.09□□□□□ -0.47
PRKDC-204ENST00000521331 ZNF732B4DXR9 585 aa12.09□□□□□ -0.47
PRKDC-204ENST00000521331 RHBDL1O75783 438 aa12.09□□□□□ -0.47
PRKDC-204ENST00000521331 PRB2P02812 416 aaPredicted RBP12.09□□□□□ -0.47
PRKDC-204ENST00000521331 VSIG10L2P0DP72 767 aa12.09□□□□□ -0.47
PRKDC-204ENST00000521331 MAP2K3P46734 347 aa12.09□□□□□ -0.47
PRKDC-204ENST00000521331 CAPZA1P52907 286 aa12.09□□□□□ -0.47
PRKDC-204ENST00000521331 PPP1R8Q12972 351 aaKnown RBP12.09□□□□□ -0.47
PRKDC-204ENST00000521331 CEACAM21Q3KPI0 293 aa12.09□□□□□ -0.47
PRKDC-204ENST00000521331 OR2T5Q6IEZ7 315 aa12.09□□□□□ -0.47
PRKDC-204ENST00000521331 THAP5Q7Z6K1 395 aa12.09□□□□□ -0.47
PRKDC-204ENST00000521331 MKXQ8IYA7 352 aa12.09□□□□□ -0.47
PRKDC-204ENST00000521331 DEFB107AQ8IZN7 70 aa12.09□□□□□ -0.47
PRKDC-204ENST00000521331 OR8B12Q8NGG6 310 aa12.09□□□□□ -0.47
PRKDC-204ENST00000521331 OR2T29Q8NH02 315 aa12.09□□□□□ -0.47
PRKDC-204ENST00000521331 OR51V1Q9H2C8 321 aa12.09□□□□□ -0.47
PRKDC-204ENST00000521331 YY1AP1Q9H869 796 aa12.09□□□□□ -0.47
PRKDC-204ENST00000521331 C19orf12Q9NSK7 152 aa12.09□□□□□ -0.47
PRKDC-204ENST00000521331 TAGLN3Q9UI15 199 aa12.09□□□□□ -0.47
PRKDC-204ENST00000521331 U3KQV3 271 aa12.09□□□□□ -0.47
PRKDC-204ENST00000521331 OR5B21A6NL26 309 aa12.08□□□□□ -0.48
PRKDC-204ENST00000521331 H3BN98 237 aa12.08□□□□□ -0.48
PRKDC-204ENST00000521331 SNX3O60493 162 aa12.08□□□□□ -0.48
PRKDC-204ENST00000521331 ATP6V1B2P21281 511 aa12.08□□□□□ -0.48
PRKDC-204ENST00000521331 LGALS4P56470 323 aa12.08□□□□□ -0.48
PRKDC-204ENST00000521331 RPL31P62899 125 aaKnown RBP12.08□□□□□ -0.48
PRKDC-204ENST00000521331 EMX1Q04741 257 aaPredicted RBP12.08□□□□□ -0.48
PRKDC-204ENST00000521331 GK3PQ14409 553 aa12.08□□□□□ -0.48
PRKDC-204ENST00000521331 SMIM21Q3B7S5 101 aa12.08□□□□□ -0.48
PRKDC-204ENST00000521331 HIST2H2BDQ6DRA6 164 aa12.08□□□□□ -0.48
PRKDC-204ENST00000521331 IQCF1Q8N6M8 205 aa12.08□□□□□ -0.48
PRKDC-204ENST00000521331 OR5A2Q8NGI9 324 aa12.08□□□□□ -0.48
PRKDC-204ENST00000521331 MRAPQ8TCY5 172 aa12.08□□□□□ -0.48
PRKDC-204ENST00000521331 AQP3Q92482 292 aa12.08□□□□□ -0.48
PRKDC-204ENST00000521331 CDCA4Q9BXL8 241 aa12.08□□□□□ -0.48
PRKDC-204ENST00000521331 VNN3Q9NY84 501 aa12.08□□□□□ -0.48
PRKDC-204ENST00000521331 A0A0U1RQV5 110 aa12.07□□□□□ -0.48
PRKDC-204ENST00000521331 ACOD1A6NK06 481 aa12.07□□□□□ -0.48
PRKDC-204ENST00000521331 VGLL3A8MV65 326 aa12.07□□□□□ -0.48
PRKDC-204ENST00000521331 PRR23D1E9PI22 279 aaPredicted RBP12.07□□□□□ -0.48
PRKDC-204ENST00000521331 SLC1A7O00341 560 aa12.07□□□□□ -0.48
PRKDC-204ENST00000521331 PRODHO43272 600 aa12.07□□□□□ -0.48
PRKDC-204ENST00000521331 CHST1O43916 411 aa12.07□□□□□ -0.48
PRKDC-204ENST00000521331 SELENOFO60613 162 aa12.07□□□□□ -0.48
PRKDC-204ENST00000521331 FBXO24O75426 580 aa12.07□□□□□ -0.48
PRKDC-204ENST00000521331 MTRF1O75570 445 aaKnown RBP12.07□□□□□ -0.48
PRKDC-204ENST00000521331 PRR23D2P0DMB1 279 aaPredicted RBP12.07□□□□□ -0.48
PRKDC-204ENST00000521331 ATP6V1B1P15313 513 aa12.07□□□□□ -0.48
PRKDC-204ENST00000521331 BMXP51813 675 aa12.07□□□□□ -0.48
PRKDC-204ENST00000521331 CEP78Q5JTW2 689 aa12.07□□□□□ -0.48
PRKDC-204ENST00000521331 Q8N2B8 174 aa12.07□□□□□ -0.48
PRKDC-204ENST00000521331 ZNF561Q8N587 486 aa12.07□□□□□ -0.48
PRKDC-204ENST00000521331 OR10G2Q8NGC3 310 aa12.07□□□□□ -0.48
PRKDC-204ENST00000521331 NKX3-1Q99801 234 aaPredicted RBP12.07□□□□□ -0.48
PRKDC-204ENST00000521331 NIPSNAP1Q9BPW8 284 aa12.07□□□□□ -0.48
PRKDC-204ENST00000521331 MUC13Q9H3R2 512 aa12.07□□□□□ -0.48
PRKDC-204ENST00000521331 NECAP2Q9NVZ3 263 aa12.07□□□□□ -0.48
PRKDC-204ENST00000521331 USE1Q9NZ43 259 aa12.07□□□□□ -0.48
PRKDC-204ENST00000521331 TCRBV5S2A0A599 114 aa12.06□□□□□ -0.48
PRKDC-204ENST00000521331 ARRDC5A6NEK1 342 aa12.06□□□□□ -0.48
PRKDC-204ENST00000521331 RFPL4AA6NLU0 287 aa12.06□□□□□ -0.48
PRKDC-204ENST00000521331 RFPL4AL1F8VTS6 287 aa12.06□□□□□ -0.48
PRKDC-204ENST00000521331 LOXL3P58215 753 aa12.06□□□□□ -0.48
PRKDC-204ENST00000521331 ERVFRD-1P60508 538 aa12.06□□□□□ -0.48
PRKDC-204ENST00000521331 RIPPLY1Q0D2K3 151 aa12.06□□□□□ -0.48
PRKDC-204ENST00000521331 NSUN5P1Q3KNT7 163 aa12.06□□□□□ -0.48
PRKDC-204ENST00000521331 FAM98BQ52LJ0 330 aaKnown RBP12.06□□□□□ -0.48
PRKDC-204ENST00000521331 ZBTB37Q5TC79 503 aa12.06□□□□□ -0.48
PRKDC-204ENST00000521331 TMEM200BQ69YZ2 307 aa12.06□□□□□ -0.48
PRKDC-204ENST00000521331 PLBD1Q6P4A8 553 aa12.06□□□□□ -0.48
PRKDC-204ENST00000521331 HAGHLQ6PII5 290 aaPredicted RBP12.06□□□□□ -0.48
PRKDC-204ENST00000521331 ACP7Q6ZNF0 438 aa12.06□□□□□ -0.48
PRKDC-204ENST00000521331 KRT77Q7Z794 578 aa12.06□□□□□ -0.48
PRKDC-204ENST00000521331 NDUFA11Q86Y39 141 aa12.06□□□□□ -0.48
PRKDC-204ENST00000521331 C11orf42Q8N5U0 333 aa12.06□□□□□ -0.48
PRKDC-204ENST00000521331 POC1AQ8NBT0 407 aa12.06□□□□□ -0.48
PRKDC-204ENST00000521331 OR4F17Q8NGA8 305 aa12.06□□□□□ -0.48
PRKDC-204ENST00000521331 PIFOQ8TCI5 191 aa12.06□□□□□ -0.48
PRKDC-204ENST00000521331 OR4F4Q96R69 305 aa12.06□□□□□ -0.48
PRKDC-204ENST00000521331 C1orf21Q9H246 121 aa12.06□□□□□ -0.48
PRKDC-204ENST00000521331 ZNF702PQ9H963 129 aa12.06□□□□□ -0.48
PRKDC-204ENST00000521331 ARL8BQ9NVJ2 186 aa12.06□□□□□ -0.48
PRKDC-204ENST00000521331 LAMP5Q9UJQ1 280 aa12.06□□□□□ -0.48
PRKDC-204ENST00000521331 FAM90A8PA6NJQ4 464 aa12.05□□□□□ -0.48
PRKDC-204ENST00000521331 GSC2O15499 205 aa12.05□□□□□ -0.48
PRKDC-204ENST00000521331 ALOX5APP20292 161 aa12.05□□□□□ -0.48
PRKDC-204ENST00000521331 COX7A1P24310 79 aa12.05□□□□□ -0.48
PRKDC-204ENST00000521331 PAX6P26367 422 aa12.05□□□□□ -0.48
PRKDC-204ENST00000521331 PRDX2P32119 198 aa12.05□□□□□ -0.48
PRKDC-204ENST00000521331 MNAT1P51948 309 aa12.05□□□□□ -0.48
PRKDC-204ENST00000521331 OXLD1Q5BKU9 147 aa12.05□□□□□ -0.48
PRKDC-204ENST00000521331 SLC35D3Q5M8T2 416 aa12.05□□□□□ -0.48
PRKDC-204ENST00000521331 PLCXD3Q63HM9 321 aa12.05□□□□□ -0.48
PRKDC-204ENST00000521331 LCN8Q6JVE9 175 aa12.05□□□□□ -0.48
PRKDC-204ENST00000521331 KCTD18Q6PI47 426 aaPredicted RBP12.05□□□□□ -0.48
PRKDC-204ENST00000521331 DEGS2Q6QHC5 323 aa12.05□□□□□ -0.48
PRKDC-204ENST00000521331 COMMD2Q86X83 199 aa12.05□□□□□ -0.48
PRKDC-204ENST00000521331 DHFR2Q86XF0 187 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms