RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 OR5L1Q8NGL2 311 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 LPAR5Q9H1C0 372 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 FAM86C1Q9NVL1 165 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 PCNX3Q9H6A9 2034 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 C9orf170A2RU37 121 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 SCO1O75880 301 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 ITGB2P05107 769 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 PTGS2P35354 604 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 ZP1P60852 638 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 EIF3IQ13347 325 aaKnown RBP8.91□□□□□ -0.98
MCF2-209ENST00000520602 ZNF260Q3ZCT1 412 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 ATP1A1-AS1Q5TC04 95 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 LAMTOR1Q6IAA8 161 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 ADAD2Q8NCV1 583 aaKnown RBP8.91□□□□□ -0.98
MCF2-209ENST00000520602 PSMF1Q92530 271 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 RDH5Q92781 318 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 FBXO17Q96EF6 278 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 GPR35Q9HC97 309 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 SPAARA0A1B0GVQ0 90 aa8.9□□□□□ -0.98
MCF2-209ENST00000520602 TPPPO94811 219 aa8.9□□□□□ -0.98
MCF2-209ENST00000520602 ZNF17P17021 662 aa8.9□□□□□ -0.98
MCF2-209ENST00000520602 TBPP20226 339 aa8.9□□□□□ -0.98
MCF2-209ENST00000520602 PSMB6P28072 239 aa8.9□□□□□ -0.98
MCF2-209ENST00000520602 GPM6AP51674 278 aa8.9□□□□□ -0.98
MCF2-209ENST00000520602 UNC119Q13432 240 aa8.9□□□□□ -0.98
MCF2-209ENST00000520602 HLXQ14774 488 aaPredicted RBP8.9□□□□□ -0.98
MCF2-209ENST00000520602 TMEM128Q5BJH2 165 aa8.9□□□□□ -0.98
MCF2-209ENST00000520602 SLC25A53Q5H9E4 307 aa8.9□□□□□ -0.98
MCF2-209ENST00000520602 LPCAT3Q6P1A2 487 aa8.9□□□□□ -0.98
MCF2-209ENST00000520602 HAGHLQ6PII5 290 aaPredicted RBP8.9□□□□□ -0.98
MCF2-209ENST00000520602 OSR2Q8N2R0 312 aa8.9□□□□□ -0.98
MCF2-209ENST00000520602 SGK3Q96BR1 496 aa8.9□□□□□ -0.98
MCF2-209ENST00000520602 HDHD3Q9BSH5 251 aaPredicted RBP8.9□□□□□ -0.98
MCF2-209ENST00000520602 GPR87Q9BY21 358 aa8.9□□□□□ -0.98
MCF2-209ENST00000520602 OR14J1Q9UGF5 321 aa8.9□□□□□ -0.98
MCF2-209ENST00000520602 VSIG4Q9Y279 399 aa8.9□□□□□ -0.98
MCF2-209ENST00000520602 ZNF816-ZNF321PA0A0X1KG74 233 aa8.9□□□□□ -0.98
MCF2-209ENST00000520602 SERPINE3A8MV23 424 aa8.9□□□□□ -0.98
MCF2-209ENST00000520602 ADAP1O75689 374 aa8.9□□□□□ -0.98
MCF2-209ENST00000520602 TK1P04183 234 aa8.9□□□□□ -0.98
MCF2-209ENST00000520602 SUCLG1P53597 346 aaKnown RBP8.9□□□□□ -0.98
MCF2-209ENST00000520602 PSG4Q00888 419 aa8.9□□□□□ -0.98
MCF2-209ENST00000520602 SP6Q3SY56 376 aa8.9□□□□□ -0.98
MCF2-209ENST00000520602 LHFPL2Q6ZUX7 228 aa8.9□□□□□ -0.98
MCF2-209ENST00000520602 ARRDC1Q8N5I2 433 aa8.9□□□□□ -0.98
MCF2-209ENST00000520602 OR14K1Q8NGZ2 314 aa8.9□□□□□ -0.98
MCF2-209ENST00000520602 SCARB1Q8WTV0 552 aa8.9□□□□□ -0.98
MCF2-209ENST00000520602 SPSB1Q96BD6 273 aa8.9□□□□□ -0.98
MCF2-209ENST00000520602 IP6K3Q96PC2 410 aa8.9□□□□□ -0.98
MCF2-209ENST00000520602 A0A1B0GTI1 187 aa8.9□□□□□ -0.99
MCF2-209ENST00000520602 XRCC2O43543 280 aa8.9□□□□□ -0.99
MCF2-209ENST00000520602 SLC34A2O95436 690 aa8.9□□□□□ -0.99
MCF2-209ENST00000520602 CNOT4O95628 575 aaKnown RBP8.9□□□□□ -0.99
MCF2-209ENST00000520602 CELA3AP09093 270 aa8.9□□□□□ -0.99
MCF2-209ENST00000520602 FCGR2CP31995 323 aa8.9□□□□□ -0.99
MCF2-209ENST00000520602 CAV2P51636 162 aa8.9□□□□□ -0.99
MCF2-209ENST00000520602 ARHGDIBP52566 201 aa8.9□□□□□ -0.99
MCF2-209ENST00000520602 H2BFSP57053 126 aa8.9□□□□□ -0.99
MCF2-209ENST00000520602 GNMTQ14749 295 aa8.9□□□□□ -0.99
MCF2-209ENST00000520602 PNLIPRP3Q17RR3 467 aa8.9□□□□□ -0.99
MCF2-209ENST00000520602 WDFY1Q8IWB7 410 aa8.9□□□□□ -0.99
MCF2-209ENST00000520602 OR5M9Q8NGP3 310 aa8.9□□□□□ -0.99
MCF2-209ENST00000520602 OBP2BQ9NPH6 170 aa8.9□□□□□ -0.99
MCF2-209ENST00000520602 SLC7A10Q9NS82 523 aa8.9□□□□□ -0.99
MCF2-209ENST00000520602 NECAP2Q9NVZ3 263 aa8.9□□□□□ -0.99
MCF2-209ENST00000520602 ACACAQ13085 2346 aa8.9□□□□□ -0.99
MCF2-209ENST00000520602 TRGV5A0A0B4J1U4 118 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 SLC22A20A6NK97 555 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 RFPL4AA6NLU0 287 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 RFPL4AL1F8VTS6 287 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 ERVH48-1M5A8F1 160 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 CFDP00746 253 aaPredicted RBP8.89□□□□□ -0.99
MCF2-209ENST00000520602 PVALBP20472 110 aaPredicted RBP8.89□□□□□ -0.99
MCF2-209ENST00000520602 RPS27AP62979 156 aaKnown RBP8.89□□□□□ -0.99
MCF2-209ENST00000520602 UBA52P62987 128 aaKnown RBP8.89□□□□□ -0.99
MCF2-209ENST00000520602 UBE2V2Q15819 145 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 C1QL2Q7Z5L3 287 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 ZNF695Q8IW36 515 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 SKA3Q8IX90 412 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 BMPERQ8N8U9 685 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 DYRK2Q92630 601 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 HAS2Q92819 552 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 RBPMSQ93062 196 aaKnown RBP8.89□□□□□ -0.99
MCF2-209ENST00000520602 PECRQ9BY49 303 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 OR2H1Q9GZK4 316 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 CHST5Q9GZS9 411 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 C1orf123Q9NWV4 160 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 ROS1P08922 2347 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 ZNF732B4DXR9 585 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 PHF1O43189 567 aaPredicted RBP8.89□□□□□ -0.99
MCF2-209ENST00000520602 IFNA2P01563 188 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 TPT1P13693 172 aaKnown RBP8.89□□□□□ -0.99
MCF2-209ENST00000520602 IGFBP3P17936 291 aaPredicted RBP8.89□□□□□ -0.99
MCF2-209ENST00000520602 CXCL2P19875 107 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 EPHA1P21709 976 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 ACP1P24666 158 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 GSK3AP49840 483 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 ENDOGQ14249 297 aaKnown RBP8.89□□□□□ -0.99
MCF2-209ENST00000520602 ZNF766Q5HY98 468 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 ZDHHC22Q8N966 263 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms