RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 PRKCDQ05655 676 aa2.69□□□□□ -1.98
SQLE-204ENST00000520493 NAB1Q13506 487 aa2.69□□□□□ -1.98
SQLE-204ENST00000520493 TRAM1Q15629 374 aa2.69□□□□□ -1.98
SQLE-204ENST00000520493 TRIP13Q15645 432 aaPredicted RBP2.69□□□□□ -1.98
SQLE-204ENST00000520493 TTC32Q5I0X7 151 aa2.69□□□□□ -1.98
SQLE-204ENST00000520493 TIMM23BQ5SRD1 257 aa2.69□□□□□ -1.98
SQLE-204ENST00000520493 HHATQ5VTY9 493 aa2.69□□□□□ -1.98
SQLE-204ENST00000520493 FAM151BQ6UXP7 276 aa2.69□□□□□ -1.98
SQLE-204ENST00000520493 ZNF429Q86V71 674 aa2.69□□□□□ -1.98
SQLE-204ENST00000520493 SFXN5Q8TD22 340 aa2.69□□□□□ -1.98
SQLE-204ENST00000520493 RXFP4Q8TDU9 374 aa2.69□□□□□ -1.98
SQLE-204ENST00000520493 RNF138Q8WVD3 245 aa2.69□□□□□ -1.98
SQLE-204ENST00000520493 PPWD1Q96BP3 646 aaKnown RBP2.69□□□□□ -1.98
SQLE-204ENST00000520493 Q96MT0 163 aa2.69□□□□□ -1.98
SQLE-204ENST00000520493 RILPQ96NA2 401 aa2.69□□□□□ -1.98
SQLE-204ENST00000520493 TAAR1Q96RJ0 339 aa2.69□□□□□ -1.98
SQLE-204ENST00000520493 TIMM17AQ99595 171 aa2.69□□□□□ -1.98
SQLE-204ENST00000520493 HSD17B10Q99714 261 aaKnown RBP2.69□□□□□ -1.98
SQLE-204ENST00000520493 APOL4Q9BPW4 351 aa2.69□□□□□ -1.98
SQLE-204ENST00000520493 RSG1Q9BU20 258 aa2.69□□□□□ -1.98
SQLE-204ENST00000520493 ZNF426Q9BUY5 554 aa2.69□□□□□ -1.98
SQLE-204ENST00000520493 TMED9Q9BVK6 235 aa2.69□□□□□ -1.98
SQLE-204ENST00000520493 SPZ1Q9BXG8 430 aa2.69□□□□□ -1.98
SQLE-204ENST00000520493 DRC3Q9H069 523 aa2.69□□□□□ -1.98
SQLE-204ENST00000520493 ASCL3Q9NQ33 180 aa2.69□□□□□ -1.98
SQLE-204ENST00000520493 C12orf4Q9NQ89 552 aa2.69□□□□□ -1.98
SQLE-204ENST00000520493 DDIT4Q9NX09 232 aa2.69□□□□□ -1.98
SQLE-204ENST00000520493 NAGKQ9UJ70 344 aa2.69□□□□□ -1.98
SQLE-204ENST00000520493 FBXL3Q9UKT7 428 aa2.69□□□□□ -1.98
SQLE-204ENST00000520493 NUP153P49790 1475 aaKnown RBP2.69□□□□□ -1.98
SQLE-204ENST00000520493 GTF3C1Q12789 2109 aa2.69□□□□□ -1.98
SQLE-204ENST00000520493 PIKFYVEQ9Y2I7 2098 aa2.69□□□□□ -1.98
SQLE-204ENST00000520493 COL16A1Q07092 1604 aaPredicted RBP2.68□□□□□ -1.98
SQLE-204ENST00000520493 TRAV8-6A0A0B4J262 113 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 KIR2DS1A0A191URI9 304 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 A0A1W2PRG6 482 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 WI2-2373I1.2A0A1W2PRP0 233 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 PRAMEF26H0Y7S4 382 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 LIN7AO14910 233 aaPredicted RBP2.68□□□□□ -1.98
SQLE-204ENST00000520493 FABP7O15540 132 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 COCHO43405 550 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 SLC22A5O76082 557 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 MYO1DO94832 1006 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 GLSO94925 669 aaPredicted RBP2.68□□□□□ -1.98
SQLE-204ENST00000520493 SLC25A14O95258 325 aaPredicted RBP2.68□□□□□ -1.98
SQLE-204ENST00000520493 SNAP29O95721 258 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 PET100P0DJ07 73 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 ZNF35P13682 527 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 DTYMKP23919 212 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 TUFMP49411 452 aaKnown RBP2.68□□□□□ -1.98
SQLE-204ENST00000520493 PPOXP50336 477 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 RPL14P50914 215 aaKnown RBP2.68□□□□□ -1.98
SQLE-204ENST00000520493 MNAT1P51948 309 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 GFERP55789 205 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 OR10A3P58181 314 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 RPL23P62829 140 aaKnown RBP2.68□□□□□ -1.98
SQLE-204ENST00000520493 CRADDP78560 199 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 IL5RAQ01344 420 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 PNOCQ13519 176 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 EIF4EBP2Q13542 120 aaPredicted RBP2.68□□□□□ -1.98
SQLE-204ENST00000520493 RAB31Q13636 194 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 DMC1Q14565 340 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 PRSS8Q16651 343 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 EXOC3L4Q17RC7 722 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 CEACAM21Q3KPI0 293 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 MFSD14CQ5VZR4 134 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 TMEM236Q5W0B7 351 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 CEMP1Q6PRD7 247 aaPredicted RBP2.68□□□□□ -1.98
SQLE-204ENST00000520493 FAM92BQ6ZTR7 304 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 DYNC2LI1Q8TCX1 351 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 RNASEH2CQ8TDP1 164 aaKnown RBP2.68□□□□□ -1.98
SQLE-204ENST00000520493 RDH5Q92781 318 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 HGDQ93099 445 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 PTX4Q96A99 478 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 CCDC127Q96BQ5 260 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 TM4SF18Q96CE8 201 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 FLYWCH2Q96CP2 140 aaKnown RBP2.68□□□□□ -1.98
SQLE-204ENST00000520493 ZNF488Q96MN9 340 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 ALS2CR12Q96Q35 445 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 OR2M4Q96R27 311 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 CAMK2N2Q96S95 79 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 DCUN1D5Q9BTE7 237 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 TMEM243Q9BU79 118 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 SHCBP1LQ9BZQ2 653 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 NXF2Q9GZY0 626 aaKnown RBP2.68□□□□□ -1.98
SQLE-204ENST00000520493 SLC40A1Q9NP59 571 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 DNAJC27Q9NZQ0 273 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 TMEM131Q92545 1883 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 NPHP4O75161 1426 aaPredicted RBP2.68□□□□□ -1.98
SQLE-204ENST00000520493 ELP1O95163 1332 aa2.68□□□□□ -1.98
SQLE-204ENST00000520493 MAP3K5Q99683 1374 aa2.67□□□□□ -1.98
SQLE-204ENST00000520493 TRAV19A0A0A6YYK7 116 aa2.67□□□□□ -1.98
SQLE-204ENST00000520493 IGHV5-51A0A0C4DH38 117 aa2.67□□□□□ -1.98
SQLE-204ENST00000520493 MANBAO00462 879 aa2.67□□□□□ -1.98
SQLE-204ENST00000520493 SLC31A1O15431 190 aa2.67□□□□□ -1.98
SQLE-204ENST00000520493 SYNGR1O43759 233 aa2.67□□□□□ -1.98
SQLE-204ENST00000520493 CA11O75493 328 aa2.67□□□□□ -1.98
SQLE-204ENST00000520493 REM1O75628 298 aa2.67□□□□□ -1.98
SQLE-204ENST00000520493 IGKV1D-16P01601 117 aa2.67□□□□□ -1.98
SQLE-204ENST00000520493 ORM1P02763 201 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms