RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 GATAD2BQ8WXI9 593 aa4.88□□□□□ -1.63
CTNNA1-220ENST00000520260 THRSPQ92748 146 aa4.88□□□□□ -1.63
CTNNA1-220ENST00000520260 YIPF5Q969M3 257 aa4.88□□□□□ -1.63
CTNNA1-220ENST00000520260 MARC2Q969Z3 335 aa4.88□□□□□ -1.63
CTNNA1-220ENST00000520260 C4orf45Q96LM5 186 aa4.88□□□□□ -1.63
CTNNA1-220ENST00000520260 HIST1H2AAQ96QV6 131 aa4.88□□□□□ -1.63
CTNNA1-220ENST00000520260 ZNF416Q9BWM5 594 aa4.88□□□□□ -1.63
CTNNA1-220ENST00000520260 CACNG6Q9BXT2 260 aa4.88□□□□□ -1.63
CTNNA1-220ENST00000520260 RSPO3Q9BXY4 272 aaPredicted RBP4.88□□□□□ -1.63
CTNNA1-220ENST00000520260 OR10A2Q9H208 303 aa4.88□□□□□ -1.63
CTNNA1-220ENST00000520260 WDR76Q9H967 626 aa4.88□□□□□ -1.63
CTNNA1-220ENST00000520260 PLEKHA1Q9HB21 404 aa4.88□□□□□ -1.63
CTNNA1-220ENST00000520260 NOX3Q9HBY0 568 aa4.88□□□□□ -1.63
CTNNA1-220ENST00000520260 TRIM36Q9NQ86 728 aa4.88□□□□□ -1.63
CTNNA1-220ENST00000520260 NUDT15Q9NV35 164 aa4.88□□□□□ -1.63
CTNNA1-220ENST00000520260 PFDN2Q9UHV9 154 aa4.88□□□□□ -1.63
CTNNA1-220ENST00000520260 LAMP3Q9UQV4 416 aa4.88□□□□□ -1.63
CTNNA1-220ENST00000520260 MED12Q93074 2177 aa4.88□□□□□ -1.63
CTNNA1-220ENST00000520260 HCFC1P51610 2035 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 MPDZO75970 2070 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 UNC79Q9P2D8 2635 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 TRAV6A0A075B6T7 132 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 IGLV1-36A0A0B4J1U3 117 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 A0A0G2JK05 382 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 A0A1B0GW55 424 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 A0A1W2PR80 420 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 SMIM30A4D0T7 59 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 DPRXA6NFQ7 191 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 ANXA2P2A6NMY6 339 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 ANKRD30BLA7E2S9 258 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 HMSDA8MTL9 139 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 FAM25EA8MYX2 175 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 J3QRE1 110 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 M0R135 149 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 AIPO00170 330 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 PEX14O75381 377 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 SC5DO75845 299 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 NCR1O76036 304 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 IL5P05113 134 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 EIF4EP06730 217 aaKnown RBP4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 NMBP08949 121 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 H2AFB1P0C5Y9 115 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 OR2T7P0C7T2 308 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 DUX4L2P0CJ85 424 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 DUX4L3P0CJ86 424 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 DUX4L4P0CJ87 422 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 DUX4L5P0CJ88 424 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 DUX4L6P0CJ89 424 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 DUX4L7P0CJ90 424 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 IRF2P14316 349 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 RAC2P15153 192 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 PAX1P15863 534 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 SLC25A16P16260 332 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 HTR1FP30939 366 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 CDAP32320 146 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 DCTDP32321 178 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 CDKN2AP42771 156 aaKnown RBP4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 SRP9P49458 86 aaKnown RBP4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 PDLIM4P50479 330 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 MECP2P51608 486 aaKnown RBP4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 RIDAP52758 137 aaKnown RBP4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 EFNA4P52798 201 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 ART1P52961 327 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 ZP1P60852 638 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 RAP2BP61225 183 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 PPP1CBP62140 327 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 MRPS11P82912 194 aaKnown RBP4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 PSG4Q00888 419 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 EGR3Q06889 387 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 KLF9Q13886 244 aaPredicted RBP4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 IDNKQ5T6J7 187 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 METTL11BQ5VVY1 283 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 ZNF322Q6U7Q0 402 aaPredicted RBP4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 NHLRC1Q6VVB1 395 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 CFAP77Q6ZQR2 320 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 MEPCEQ7L2J0 689 aaKnown RBP4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 DCXRQ7Z4W1 244 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 COMMD2Q86X83 199 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 MEX3DQ86XN8 651 aaKnown RBP4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 CPOQ8IVL8 374 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 C1orf87Q8N0U7 546 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 ZNF295-AS1Q8N0V1 137 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 OR6V1Q8N148 313 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 STPG2Q8N412 459 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 TOMM5Q8N4H5 51 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 IQCF1Q8N6M8 205 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 ZNF283Q8N7M2 679 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 CLRN3Q8NCR9 226 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 BVESQ8NE79 360 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 CSNK2A3Q8NEV1 391 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 OR2T35Q8NGX2 323 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 OR2T27Q8NH04 317 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 MRPL24Q96A35 216 aaKnown RBP4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 NABP1Q96AH0 204 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 ELMOD3Q96FG2 381 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 ZNF799Q96GE5 643 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 TECTBQ96PL2 329 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 ABHD1Q96SE0 405 aa4.87□□□□□ -1.63
CTNNA1-220ENST00000520260 VRK1Q99986 396 aaPredicted RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms