RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 IGHV3-49A0A0A0MS15 119 aa3.22□□□□□ -1.89
HMGB1P46-201ENST00000520062 A0A1B0GW15 77 aa3.22□□□□□ -1.89
HMGB1P46-201ENST00000520062 SLC5A10A0PJK1 596 aa3.22□□□□□ -1.89
HMGB1P46-201ENST00000520062 CENPBD1B2RD01 187 aa3.22□□□□□ -1.89
HMGB1P46-201ENST00000520062 TCAPO15273 167 aa3.22□□□□□ -1.89
HMGB1P46-201ENST00000520062 CD8AP01732 235 aa3.22□□□□□ -1.89
HMGB1P46-201ENST00000520062 PSMB2P49721 201 aa3.22□□□□□ -1.89
HMGB1P46-201ENST00000520062 LAMTOR4Q0VGL1 99 aa3.22□□□□□ -1.89
HMGB1P46-201ENST00000520062 TRDNQ13061 729 aa3.22□□□□□ -1.89
HMGB1P46-201ENST00000520062 PRSS8Q16651 343 aa3.22□□□□□ -1.89
HMGB1P46-201ENST00000520062 FBXL19-AS1Q494R0 122 aa3.22□□□□□ -1.89
HMGB1P46-201ENST00000520062 IDNKQ5T6J7 187 aa3.22□□□□□ -1.89
HMGB1P46-201ENST00000520062 ZNF695Q8IW36 515 aa3.22□□□□□ -1.89
HMGB1P46-201ENST00000520062 NELFCDQ8IXH7 590 aa3.22□□□□□ -1.89
HMGB1P46-201ENST00000520062 OTUD6BQ8N6M0 293 aa3.22□□□□□ -1.89
HMGB1P46-201ENST00000520062 OR4M2Q8NGB6 313 aa3.22□□□□□ -1.89
HMGB1P46-201ENST00000520062 S100PBPQ96BU1 408 aa3.22□□□□□ -1.89
HMGB1P46-201ENST00000520062 STARD4Q96DR4 205 aa3.22□□□□□ -1.89
HMGB1P46-201ENST00000520062 RBMXL1Q96E39 390 aaKnown RBP3.22□□□□□ -1.89
HMGB1P46-201ENST00000520062 DOK1Q99704 481 aa3.22□□□□□ -1.89
HMGB1P46-201ENST00000520062 TMED9Q9BVK6 235 aa3.22□□□□□ -1.89
HMGB1P46-201ENST00000520062 TREM1Q9NP99 234 aa3.22□□□□□ -1.89
HMGB1P46-201ENST00000520062 NECAP2Q9NVZ3 263 aa3.22□□□□□ -1.89
HMGB1P46-201ENST00000520062 OPN4Q9UHM6 478 aa3.22□□□□□ -1.89
HMGB1P46-201ENST00000520062 GOLGA8QA0A0J9YX86 632 aa3.21□□□□□ -1.9
HMGB1P46-201ENST00000520062 NDUFS5O43920 106 aa3.21□□□□□ -1.9
HMGB1P46-201ENST00000520062 CCNKO75909 580 aa3.21□□□□□ -1.9
HMGB1P46-201ENST00000520062 FADS2O95864 444 aaKnown RBP3.21□□□□□ -1.9
HMGB1P46-201ENST00000520062 ZNF806P0C7X5 589 aa3.21□□□□□ -1.9
HMGB1P46-201ENST00000520062 MUC1P15941 1255 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P46-201ENST00000520062 TSPAN5P62079 268 aa3.21□□□□□ -1.9
HMGB1P46-201ENST00000520062 STX3Q13277 289 aa3.21□□□□□ -1.9
HMGB1P46-201ENST00000520062 ABCA11PQ4W5N1 156 aa3.21□□□□□ -1.9
HMGB1P46-201ENST00000520062 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
HMGB1P46-201ENST00000520062 FAM19A1Q7Z5A9 133 aa3.21□□□□□ -1.9
HMGB1P46-201ENST00000520062 ZCCHC24Q8N2G6 241 aaKnown RBP3.21□□□□□ -1.9
HMGB1P46-201ENST00000520062 NECAP1Q8NC96 275 aa3.21□□□□□ -1.9
HMGB1P46-201ENST00000520062 OR5T1Q8NG75 326 aa3.21□□□□□ -1.9
HMGB1P46-201ENST00000520062 OR51Q1Q8NH59 317 aa3.21□□□□□ -1.9
HMGB1P46-201ENST00000520062 ZNF461Q8TAF7 563 aa3.21□□□□□ -1.9
HMGB1P46-201ENST00000520062 RILPQ96NA2 401 aa3.21□□□□□ -1.9
HMGB1P46-201ENST00000520062 SPIN2AQ99865 258 aa3.21□□□□□ -1.9
HMGB1P46-201ENST00000520062 SPIN2BQ9BPZ2 258 aa3.21□□□□□ -1.9
HMGB1P46-201ENST00000520062 ACBD6Q9BR61 282 aa3.21□□□□□ -1.9
HMGB1P46-201ENST00000520062 TIMM29Q9BSF4 260 aa3.21□□□□□ -1.9
HMGB1P46-201ENST00000520062 SLC38A1Q9H2H9 487 aa3.21□□□□□ -1.9
HMGB1P46-201ENST00000520062 SIRT7Q9NRC8 400 aa3.21□□□□□ -1.9
HMGB1P46-201ENST00000520062 DDIT4Q9NX09 232 aa3.21□□□□□ -1.9
HMGB1P46-201ENST00000520062 NXT1Q9UKK6 140 aaKnown RBP3.21□□□□□ -1.9
HMGB1P46-201ENST00000520062 ORC6Q9Y5N6 252 aa3.21□□□□□ -1.9
HMGB1P46-201ENST00000520062 hCG_2039718K7EN88 272 aa3.2□□□□□ -1.9
HMGB1P46-201ENST00000520062 PLPP3O14495 311 aa3.2□□□□□ -1.9
HMGB1P46-201ENST00000520062 POLR3GO15318 223 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P46-201ENST00000520062 HLA-DQB1P01920 261 aa3.2□□□□□ -1.9
HMGB1P46-201ENST00000520062 IL3RAP26951 378 aa3.2□□□□□ -1.9
HMGB1P46-201ENST00000520062 PPP1CAP62136 330 aa3.2□□□□□ -1.9
HMGB1P46-201ENST00000520062 IL5RAQ01344 420 aa3.2□□□□□ -1.9
HMGB1P46-201ENST00000520062 ZNF816Q0VGE8 651 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P46-201ENST00000520062 CDC20Q12834 499 aa3.2□□□□□ -1.9
HMGB1P46-201ENST00000520062 GUSBP1Q15486 140 aa3.2□□□□□ -1.9
HMGB1P46-201ENST00000520062 C17orf78Q8N4C9 275 aa3.2□□□□□ -1.9
HMGB1P46-201ENST00000520062 RNF10Q8N5U6 811 aaKnown RBP3.2□□□□□ -1.9
HMGB1P46-201ENST00000520062 SLC25A29Q8N8R3 303 aa3.2□□□□□ -1.9
HMGB1P46-201ENST00000520062 CDRT4Q8N9R6 151 aa3.2□□□□□ -1.9
HMGB1P46-201ENST00000520062 DRAXINQ8NBI3 349 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P46-201ENST00000520062 OR5M1Q8NGP8 315 aa3.2□□□□□ -1.9
HMGB1P46-201ENST00000520062 ESR2Q92731 530 aa3.2□□□□□ -1.9
HMGB1P46-201ENST00000520062 VAT1Q99536 393 aa3.2□□□□□ -1.9
HMGB1P46-201ENST00000520062 CDX2Q99626 313 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P46-201ENST00000520062 PLEKHA1Q9HB21 404 aa3.2□□□□□ -1.9
HMGB1P46-201ENST00000520062 FARSAQ9Y285 508 aaKnown RBP3.2□□□□□ -1.9
HMGB1P46-201ENST00000520062 POFUT2Q9Y2G5 429 aa3.2□□□□□ -1.9
HMGB1P46-201ENST00000520062 CBY1Q9Y3M2 126 aa3.2□□□□□ -1.9
HMGB1P46-201ENST00000520062 GMEB1Q9Y692 573 aa3.2□□□□□ -1.9
HMGB1P46-201ENST00000520062 IGHV1-3A0A0C4DH29 117 aa3.19□□□□□ -1.9
HMGB1P46-201ENST00000520062 F8VP50 259 aa3.19□□□□□ -1.9
HMGB1P46-201ENST00000520062 RNASEK-C17orf49H0YIS7 233 aa3.19□□□□□ -1.9
HMGB1P46-201ENST00000520062 SCO1O75880 301 aa3.19□□□□□ -1.9
HMGB1P46-201ENST00000520062 CYB5R3P00387 301 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P46-201ENST00000520062 NPY1RP25929 384 aa3.19□□□□□ -1.9
HMGB1P46-201ENST00000520062 IL12BP29460 328 aa3.19□□□□□ -1.9
HMGB1P46-201ENST00000520062 ADIGQ0VDE8 80 aa3.19□□□□□ -1.9
HMGB1P46-201ENST00000520062 XRCC4Q13426 336 aa3.19□□□□□ -1.9
HMGB1P46-201ENST00000520062 EIF4EBP1Q13541 118 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P46-201ENST00000520062 PIGHQ14442 188 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P46-201ENST00000520062 MAPRE2Q15555 327 aa3.19□□□□□ -1.9
HMGB1P46-201ENST00000520062 BBS7Q8IWZ6 715 aa3.19□□□□□ -1.9
HMGB1P46-201ENST00000520062 GAPTQ8N292 157 aa3.19□□□□□ -1.9
HMGB1P46-201ENST00000520062 OR2Y1Q8NGV0 311 aa3.19□□□□□ -1.9
HMGB1P46-201ENST00000520062 OR13G1Q8NGZ3 307 aa3.19□□□□□ -1.9
HMGB1P46-201ENST00000520062 OR10C1Q96KK4 312 aa3.19□□□□□ -1.9
HMGB1P46-201ENST00000520062 OR2M4Q96R27 311 aa3.19□□□□□ -1.9
HMGB1P46-201ENST00000520062 ZNF649Q9BS31 505 aa3.19□□□□□ -1.9
HMGB1P46-201ENST00000520062 SHCBP1LQ9BZQ2 653 aa3.19□□□□□ -1.9
HMGB1P46-201ENST00000520062 C12orf4Q9NQ89 552 aa3.19□□□□□ -1.9
HMGB1P46-201ENST00000520062 NLE1Q9NVX2 485 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P46-201ENST00000520062 C21orf62Q9NYP8 219 aa3.19□□□□□ -1.9
HMGB1P46-201ENST00000520062 MAT2BQ9NZL9 334 aa3.19□□□□□ -1.9
HMGB1P46-201ENST00000520062 CYB5R1Q9UHQ9 305 aa3.19□□□□□ -1.9
HMGB1P46-201ENST00000520062 MRM2Q9UI43 246 aaKnown RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms