RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 ZBED3Q96IU2 234 aaPredicted RBP2.55□□□□□ -2
NPM1-206ENST00000519955 API5Q9BZZ5 524 aaKnown RBP2.55□□□□□ -2
NPM1-206ENST00000519955 CA10Q9NS85 328 aa2.55□□□□□ -2
NPM1-206ENST00000519955 TMEM100Q9NV29 134 aa2.55□□□□□ -2
NPM1-206ENST00000519955 PPIL1Q9Y3C6 166 aa2.55□□□□□ -2
NPM1-206ENST00000519955 TRIP11Q15643 1979 aa2.54□□□□□ -2
NPM1-206ENST00000519955 RPRD2Q5VT52 1461 aaKnown RBP2.54□□□□□ -2
NPM1-206ENST00000519955 SBNO1A3KN83 1393 aa2.54□□□□□ -2
NPM1-206ENST00000519955 TRAV8-4A0A0B4J246 113 aa2.54□□□□□ -2
NPM1-206ENST00000519955 TRAV8-6A0A0B4J262 113 aa2.54□□□□□ -2
NPM1-206ENST00000519955 A0A1W2PRF3 423 aa2.54□□□□□ -2
NPM1-206ENST00000519955 A0A1W2PRM7 423 aa2.54□□□□□ -2
NPM1-206ENST00000519955 DFFAO00273 331 aa2.54□□□□□ -2
NPM1-206ENST00000519955 P01737 135 aa2.54□□□□□ -2
NPM1-206ENST00000519955 CCT6AP40227 531 aaKnown RBP2.54□□□□□ -2
NPM1-206ENST00000519955 GRB2P62993 217 aaKnown RBP2.54□□□□□ -2
NPM1-206ENST00000519955 THOC7Q6I9Y2 204 aaKnown RBP2.54□□□□□ -2
NPM1-206ENST00000519955 APOBEC3HQ6NTF7 200 aaKnown RBP2.54□□□□□ -2
NPM1-206ENST00000519955 SLC35D2Q76EJ3 337 aa2.54□□□□□ -2
NPM1-206ENST00000519955 PDPNQ86YL7 162 aa2.54□□□□□ -2
NPM1-206ENST00000519955 LINC00469Q8N7U9 141 aa2.54□□□□□ -2
NPM1-206ENST00000519955 OR2M7Q8NG81 312 aa2.54□□□□□ -2
NPM1-206ENST00000519955 OR8D1Q8WZ84 308 aa2.54□□□□□ -2
NPM1-206ENST00000519955 TM2D3Q9BRN9 247 aa2.54□□□□□ -2
NPM1-206ENST00000519955 MS4A8Q9BY19 250 aa2.54□□□□□ -2
NPM1-206ENST00000519955 RGCCQ9H4X1 137 aa2.54□□□□□ -2
NPM1-206ENST00000519955 TAS2R1Q9NYW7 299 aa2.54□□□□□ -2
NPM1-206ENST00000519955 STX18Q9P2W9 335 aaKnown RBP2.54□□□□□ -2
NPM1-206ENST00000519955 ZNF229Q9UJW7 825 aa2.54□□□□□ -2
NPM1-206ENST00000519955 ENPP4Q9Y6X5 453 aa2.54□□□□□ -2
NPM1-206ENST00000519955 BAZ2AQ9UIF9 1905 aaKnown RBP2.54□□□□□ -2
NPM1-206ENST00000519955 SIGLEC1Q9BZZ2 1709 aa2.54□□□□□ -2
NPM1-206ENST00000519955 IGHV2OR16-5A0A0B4J2B6 119 aa2.53□□□□□ -2
NPM1-206ENST00000519955 KIR2DS1A0A191URI9 304 aa2.53□□□□□ -2
NPM1-206ENST00000519955 GOLGA6L7A0A1B0GV03 622 aa2.53□□□□□ -2
NPM1-206ENST00000519955 FSTL3O95633 263 aa2.53□□□□□ -2
NPM1-206ENST00000519955 IGKV1D-16P01601 117 aa2.53□□□□□ -2
NPM1-206ENST00000519955 IGLV6-57P01721 117 aa2.53□□□□□ -2
NPM1-206ENST00000519955 INAFM2P0DMQ5 153 aa2.53□□□□□ -2
NPM1-206ENST00000519955 MSR1P21757 451 aa2.53□□□□□ -2
NPM1-206ENST00000519955 TUBG1P23258 451 aa2.53□□□□□ -2
NPM1-206ENST00000519955 PEX19P40855 299 aa2.53□□□□□ -2
NPM1-206ENST00000519955 ATP5G2Q06055 141 aa2.53□□□□□ -2
NPM1-206ENST00000519955 FAM131AQ6UXB0 335 aa2.53□□□□□ -2
NPM1-206ENST00000519955 OR5T3Q8NGG3 340 aa2.53□□□□□ -2
NPM1-206ENST00000519955 OR6K6Q8NGW6 343 aa2.53□□□□□ -2
NPM1-206ENST00000519955 ING5Q8WYH8 240 aa2.53□□□□□ -2
NPM1-206ENST00000519955 HGDQ93099 445 aa2.53□□□□□ -2
NPM1-206ENST00000519955 YIPF5Q969M3 257 aa2.53□□□□□ -2
NPM1-206ENST00000519955 YIPF6Q96EC8 236 aa2.53□□□□□ -2
NPM1-206ENST00000519955 TUBG2Q9NRH3 451 aa2.53□□□□□ -2
NPM1-206ENST00000519955 DDX18Q9NVP1 670 aaKnown RBP2.53□□□□□ -2
NPM1-206ENST00000519955 KLF12Q9Y4X4 402 aa2.53□□□□□ -2
NPM1-206ENST00000519955 SLC22A7Q9Y694 548 aa2.53□□□□□ -2
NPM1-206ENST00000519955 SEC16AO15027 2179 aa2.53□□□□□ -2
NPM1-206ENST00000519955 BRCA1P38398 1863 aaKnown RBP2.52□□□□□ -2.01
NPM1-206ENST00000519955 SHANK1Q9Y566 2161 aa2.52□□□□□ -2.01
NPM1-206ENST00000519955 A0A1W2PNN7 141 aa2.52□□□□□ -2.01
NPM1-206ENST00000519955 SMC2O95347 1197 aa2.52□□□□□ -2.01
NPM1-206ENST00000519955 PTTG1O95997 202 aa2.52□□□□□ -2.01
NPM1-206ENST00000519955 CFHR2P36980 270 aa2.52□□□□□ -2.01
NPM1-206ENST00000519955 CSKP41240 450 aa2.52□□□□□ -2.01
NPM1-206ENST00000519955 PSMB2P49721 201 aa2.52□□□□□ -2.01
NPM1-206ENST00000519955 RGS6P49758 472 aa2.52□□□□□ -2.01
NPM1-206ENST00000519955 ST3GAL4Q11206 333 aa2.52□□□□□ -2.01
NPM1-206ENST00000519955 DOC2AQ14183 400 aa2.52□□□□□ -2.01
NPM1-206ENST00000519955 FBXL19-AS1Q494R0 122 aa2.52□□□□□ -2.01
NPM1-206ENST00000519955 ADM2Q7Z4H4 148 aa2.52□□□□□ -2.01
NPM1-206ENST00000519955 LRP11Q86VZ4 500 aa2.52□□□□□ -2.01
NPM1-206ENST00000519955 LRRC8AQ8IWT6 810 aa2.52□□□□□ -2.01
NPM1-206ENST00000519955 ZCCHC24Q8N2G6 241 aaKnown RBP2.52□□□□□ -2.01
NPM1-206ENST00000519955 CYB561A3Q8NBI2 242 aa2.52□□□□□ -2.01
NPM1-206ENST00000519955 ZNF420Q8TAQ5 688 aaPredicted RBP2.52□□□□□ -2.01
NPM1-206ENST00000519955 ORAOV1Q8WV07 137 aa2.52□□□□□ -2.01
NPM1-206ENST00000519955 BAALCQ8WXS3 180 aa2.52□□□□□ -2.01
NPM1-206ENST00000519955 GABRG3Q99928 467 aa2.52□□□□□ -2.01
NPM1-206ENST00000519955 OR2AG1Q9H205 316 aa2.52□□□□□ -2.01
NPM1-206ENST00000519955 TRIM45Q9H8W5 580 aaPredicted RBP2.52□□□□□ -2.01
NPM1-206ENST00000519955 RABL2AQ9UBK7 228 aaPredicted RBP2.52□□□□□ -2.01
NPM1-206ENST00000519955 HIVEP2P31629 2446 aa2.52□□□□□ -2.01
NPM1-206ENST00000519955 KIAA1671Q9BY89 1806 aa2.52□□□□□ -2.01
NPM1-206ENST00000519955 NRASP01111 189 aa2.51□□□□□ -2.01
NPM1-206ENST00000519955 HRASP01112 189 aa2.51□□□□□ -2.01
NPM1-206ENST00000519955 KRASP01116 189 aa2.51□□□□□ -2.01
NPM1-206ENST00000519955 OR4Q2P0C623 313 aa2.51□□□□□ -2.01
NPM1-206ENST00000519955 HLA-GP17693 338 aa2.51□□□□□ -2.01
NPM1-206ENST00000519955 BCAP31P51572 246 aa2.51□□□□□ -2.01
NPM1-206ENST00000519955 HCCSP53701 268 aa2.51□□□□□ -2.01
NPM1-206ENST00000519955 OR12D2P58182 307 aa2.51□□□□□ -2.01
NPM1-206ENST00000519955 MEF2CQ06413 473 aaPredicted RBP2.51□□□□□ -2.01
NPM1-206ENST00000519955 MRPL2Q5T653 305 aaKnown RBP2.51□□□□□ -2.01
NPM1-206ENST00000519955 CPTPQ5TA50 214 aa2.51□□□□□ -2.01
NPM1-206ENST00000519955 USP50Q70EL3 339 aaPredicted RBP2.51□□□□□ -2.01
NPM1-206ENST00000519955 TRMT10CQ7L0Y3 403 aaKnown RBP2.51□□□□□ -2.01
NPM1-206ENST00000519955 LINC00523Q86TU6 105 aa2.51□□□□□ -2.01
NPM1-206ENST00000519955 ZFAND1Q8TCF1 268 aa2.51□□□□□ -2.01
NPM1-206ENST00000519955 TCP10LQ8TDR4 215 aa2.51□□□□□ -2.01
NPM1-206ENST00000519955 ZNF649Q9BS31 505 aa2.51□□□□□ -2.01
NPM1-206ENST00000519955 C6orf50Q9HD87 102 aa2.51□□□□□ -2.01
NPM1-206ENST00000519955 ZNF302Q9NR11 478 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms