RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 OR10G4Q8NGN3 311 aa11.96□□□□□ -0.5
PABPC1-208ENST00000519004 OR2A1Q8NGT9 310 aa11.96□□□□□ -0.5
PABPC1-208ENST00000519004 STT3BQ8TCJ2 826 aa11.96□□□□□ -0.5
PABPC1-208ENST00000519004 NUDT16L1Q9BRJ7 211 aaKnown RBP11.96□□□□□ -0.5
PABPC1-208ENST00000519004 DNAJC5Q9H3Z4 198 aa11.96□□□□□ -0.5
PABPC1-208ENST00000519004 TRBV11-1A0A0K0K1C0 115 aa11.95□□□□□ -0.5
PABPC1-208ENST00000519004 CXorf51AA0A1B0GTR3 108 aa11.95□□□□□ -0.5
PABPC1-208ENST00000519004 H7C4K7 107 aa11.95□□□□□ -0.5
PABPC1-208ENST00000519004 SDCBPO00560 298 aaPredicted RBP11.95□□□□□ -0.5
PABPC1-208ENST00000519004 CTSVO60911 334 aa11.95□□□□□ -0.5
PABPC1-208ENST00000519004 ATP6V0CP27449 155 aa11.95□□□□□ -0.5
PABPC1-208ENST00000519004 OR3A2P47893 321 aa11.95□□□□□ -0.5
PABPC1-208ENST00000519004 IDH3GP51553 393 aaPredicted RBP11.95□□□□□ -0.5
PABPC1-208ENST00000519004 PTTG1IPP53801 180 aa11.95□□□□□ -0.5
PABPC1-208ENST00000519004 GNB2P62879 340 aa11.95□□□□□ -0.5
PABPC1-208ENST00000519004 BTN3A2P78410 334 aa11.95□□□□□ -0.5
PABPC1-208ENST00000519004 PLAC9Q5JTB6 97 aa11.95□□□□□ -0.5
PABPC1-208ENST00000519004 WDR25Q64LD2 544 aaPredicted RBP11.95□□□□□ -0.5
PABPC1-208ENST00000519004 RNF44Q7L0R7 432 aa11.95□□□□□ -0.5
PABPC1-208ENST00000519004 ADIPOR2Q86V24 386 aa11.95□□□□□ -0.5
PABPC1-208ENST00000519004 EMG1Q92979 244 aaKnown RBP11.95□□□□□ -0.5
PABPC1-208ENST00000519004 TBX15Q96SF7 602 aa11.95□□□□□ -0.5
PABPC1-208ENST00000519004 GPR35Q9HC97 309 aa11.95□□□□□ -0.5
PABPC1-208ENST00000519004 HIF3AQ9Y2N7 669 aa11.95□□□□□ -0.5
PABPC1-208ENST00000519004 A0A1W2PN81 502 aa11.95□□□□□ -0.5
PABPC1-208ENST00000519004 C20orf202A1L168 122 aa11.95□□□□□ -0.5
PABPC1-208ENST00000519004 FAM221AA4D161 298 aa11.95□□□□□ -0.5
PABPC1-208ENST00000519004 A8MVM7 634 aa11.95□□□□□ -0.5
PABPC1-208ENST00000519004 RAD51DO75771 328 aa11.95□□□□□ -0.5
PABPC1-208ENST00000519004 BPNT1O95861 308 aa11.95□□□□□ -0.5
PABPC1-208ENST00000519004 TDGF1P13385 188 aa11.95□□□□□ -0.5
PABPC1-208ENST00000519004 CEACAM1P13688 526 aa11.95□□□□□ -0.5
PABPC1-208ENST00000519004 CEBPBP17676 345 aa11.95□□□□□ -0.5
PABPC1-208ENST00000519004 GABRA3P34903 492 aa11.95□□□□□ -0.5
PABPC1-208ENST00000519004 CHRNA7P36544 502 aa11.95□□□□□ -0.5
PABPC1-208ENST00000519004 ASCL1P50553 236 aa11.95□□□□□ -0.5
PABPC1-208ENST00000519004 VAMP2P63027 116 aa11.95□□□□□ -0.5
PABPC1-208ENST00000519004 FAM53BQ14153 422 aa11.95□□□□□ -0.5
PABPC1-208ENST00000519004 CHRFAM7AQ494W8 412 aa11.95□□□□□ -0.5
PABPC1-208ENST00000519004 CDRT4Q8N9R6 151 aa11.95□□□□□ -0.5
PABPC1-208ENST00000519004 TSPAN32Q96QS1 320 aa11.95□□□□□ -0.5
PABPC1-208ENST00000519004 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.95□□□□□ -0.5
PABPC1-208ENST00000519004 B3GAT1Q9P2W7 334 aa11.95□□□□□ -0.5
PABPC1-208ENST00000519004 MRPS2Q9Y399 296 aaKnown RBP11.95□□□□□ -0.5
PABPC1-208ENST00000519004 IGKV1D-42A0A075B6H8 117 aa11.94□□□□□ -0.5
PABPC1-208ENST00000519004 NSG1A0A0A6YYJ2 146 aa11.94□□□□□ -0.5
PABPC1-208ENST00000519004 METTL12A8MUP2 240 aa11.94□□□□□ -0.5
PABPC1-208ENST00000519004 RRP8O43159 456 aaKnown RBP11.94□□□□□ -0.5
PABPC1-208ENST00000519004 EOMESO95936 686 aa11.94□□□□□ -0.5
PABPC1-208ENST00000519004 IFNA21P01568 189 aa11.94□□□□□ -0.5
PABPC1-208ENST00000519004 PFN1P07737 140 aaKnown RBP11.94□□□□□ -0.5
PABPC1-208ENST00000519004 MMP9P14780 707 aa11.94□□□□□ -0.5
PABPC1-208ENST00000519004 KLF3P57682 345 aaPredicted RBP11.94□□□□□ -0.5
PABPC1-208ENST00000519004 RAB38P57729 211 aa11.94□□□□□ -0.5
PABPC1-208ENST00000519004 RPL23AP62750 156 aaKnown RBP11.94□□□□□ -0.5
PABPC1-208ENST00000519004 ALG10Q5BKT4 473 aa11.94□□□□□ -0.5
PABPC1-208ENST00000519004 CXCL17Q6UXB2 119 aa11.94□□□□□ -0.5
PABPC1-208ENST00000519004 AGBL5Q8NDL9 886 aa11.94□□□□□ -0.5
PABPC1-208ENST00000519004 ZNF514Q96K75 400 aaPredicted RBP11.94□□□□□ -0.5
PABPC1-208ENST00000519004 SDF2L1Q9HCN8 221 aa11.94□□□□□ -0.5
PABPC1-208ENST00000519004 HHLA2Q9UM44 414 aa11.94□□□□□ -0.5
PABPC1-208ENST00000519004 LAMP3Q9UQV4 416 aa11.94□□□□□ -0.5
PABPC1-208ENST00000519004 SLC5A6Q9Y289 635 aa11.94□□□□□ -0.5
PABPC1-208ENST00000519004 LOC102723971A0A1B0GUV8 181 aa11.94□□□□□ -0.5
PABPC1-208ENST00000519004 LOC107986453A0A1B0GWG9 222 aa11.94□□□□□ -0.5
PABPC1-208ENST00000519004 TNFSF13O75888 250 aa11.94□□□□□ -0.5
PABPC1-208ENST00000519004 NDUFB8O95169 186 aa11.94□□□□□ -0.5
PABPC1-208ENST00000519004 ZNF43P17038 809 aa11.94□□□□□ -0.5
PABPC1-208ENST00000519004 GZMHP20718 246 aa11.94□□□□□ -0.5
PABPC1-208ENST00000519004 ID2Q02363 134 aa11.94□□□□□ -0.5
PABPC1-208ENST00000519004 METTL27Q8N6F8 245 aaPredicted RBP11.94□□□□□ -0.5
PABPC1-208ENST00000519004 IFI44Q8TCB0 444 aa11.94□□□□□ -0.5
PABPC1-208ENST00000519004 GPR119Q8TDV5 335 aa11.94□□□□□ -0.5
PABPC1-208ENST00000519004 FOXN4Q96NZ1 517 aa11.94□□□□□ -0.5
PABPC1-208ENST00000519004 PARD6GQ9BYG4 376 aaPredicted RBP11.94□□□□□ -0.5
PABPC1-208ENST00000519004 CTDSP1Q9GZU7 261 aa11.94□□□□□ -0.5
PABPC1-208ENST00000519004 GPR34Q9UPC5 381 aa11.94□□□□□ -0.5
PABPC1-208ENST00000519004 ZNF705FA8MVS1 300 aaPredicted RBP11.93□□□□□ -0.5
PABPC1-208ENST00000519004 TMEM14DPA8MWL7 114 aa11.93□□□□□ -0.5
PABPC1-208ENST00000519004 GRXCR1A8MXD5 290 aa11.93□□□□□ -0.5
PABPC1-208ENST00000519004 ZNF705DP0CH99 300 aaPredicted RBP11.93□□□□□ -0.5
PABPC1-208ENST00000519004 ZNF705BP0CI00 300 aaPredicted RBP11.93□□□□□ -0.5
PABPC1-208ENST00000519004 AMY2BP19961 511 aa11.93□□□□□ -0.5
PABPC1-208ENST00000519004 OR1D2P34982 312 aa11.93□□□□□ -0.5
PABPC1-208ENST00000519004 GPR1P46091 355 aa11.93□□□□□ -0.5
PABPC1-208ENST00000519004 SLC11A1P49279 550 aa11.93□□□□□ -0.5
PABPC1-208ENST00000519004 EMP2P54851 167 aa11.93□□□□□ -0.5
PABPC1-208ENST00000519004 DCAF7P61962 342 aa11.93□□□□□ -0.5
PABPC1-208ENST00000519004 TMEM241Q24JQ0 296 aa11.93□□□□□ -0.5
PABPC1-208ENST00000519004 MORN1Q5T089 497 aa11.93□□□□□ -0.5
PABPC1-208ENST00000519004 COX15Q7KZN9 410 aa11.93□□□□□ -0.5
PABPC1-208ENST00000519004 MARCH3Q86UD3 253 aa11.93□□□□□ -0.5
PABPC1-208ENST00000519004 TGIF2LYQ8IUE0 185 aa11.93□□□□□ -0.5
PABPC1-208ENST00000519004 MRGPRDQ8TDS7 321 aa11.93□□□□□ -0.5
PABPC1-208ENST00000519004 OIT3Q8WWZ8 545 aa11.93□□□□□ -0.5
PABPC1-208ENST00000519004 TP53RKQ96S44 253 aa11.93□□□□□ -0.5
PABPC1-208ENST00000519004 LPAR5Q9H1C0 372 aa11.93□□□□□ -0.5
PABPC1-208ENST00000519004 CALHM2Q9HA72 323 aa11.93□□□□□ -0.5
PABPC1-208ENST00000519004 ZNF581Q9P0T4 197 aa11.93□□□□□ -0.5
PABPC1-208ENST00000519004 TMEM238LA0A1B0GVL6 79 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms