RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 SFTPBP07988 381 aa11.02□□□□□ -0.65
VEGFA-219ENST00000518824 ZNF19P17023 458 aa11.02□□□□□ -0.65
VEGFA-219ENST00000518824 FGF12P61328 243 aa11.02□□□□□ -0.65
VEGFA-219ENST00000518824 PRB3Q04118 309 aaPredicted RBP11.02□□□□□ -0.65
VEGFA-219ENST00000518824 UBE2V2Q15819 145 aa11.02□□□□□ -0.65
VEGFA-219ENST00000518824 MICBQ29980 383 aa11.02□□□□□ -0.65
VEGFA-219ENST00000518824 TUSC1Q2TAM9 212 aa11.02□□□□□ -0.65
VEGFA-219ENST00000518824 CLVS2Q5SYC1 327 aa11.02□□□□□ -0.65
VEGFA-219ENST00000518824 ZBTB37Q5TC79 503 aa11.02□□□□□ -0.65
VEGFA-219ENST00000518824 RNF144BQ7Z419 303 aa11.02□□□□□ -0.65
VEGFA-219ENST00000518824 ANGPTL5Q86XS5 388 aa11.02□□□□□ -0.65
VEGFA-219ENST00000518824 CALHM1Q8IU99 346 aa11.02□□□□□ -0.65
VEGFA-219ENST00000518824 ACBD7Q8N6N7 88 aa11.02□□□□□ -0.65
VEGFA-219ENST00000518824 OR52I1Q8NGK6 324 aa11.02□□□□□ -0.65
VEGFA-219ENST00000518824 OR10Z1Q8NGY1 313 aa11.02□□□□□ -0.65
VEGFA-219ENST00000518824 TRMT10AQ8TBZ6 339 aaKnown RBP11.02□□□□□ -0.65
VEGFA-219ENST00000518824 TMEM158Q8WZ71 300 aa11.02□□□□□ -0.65
VEGFA-219ENST00000518824 ST8SIA4Q92187 359 aa11.02□□□□□ -0.65
VEGFA-219ENST00000518824 ADAT3Q96EY9 351 aaPredicted RBP11.02□□□□□ -0.65
VEGFA-219ENST00000518824 ZNF48Q96MX3 618 aaPredicted RBP11.02□□□□□ -0.65
VEGFA-219ENST00000518824 GAFA1Q96PS6 74 aa11.02□□□□□ -0.65
VEGFA-219ENST00000518824 MRI1Q9BV20 369 aa11.02□□□□□ -0.65
VEGFA-219ENST00000518824 ABCB9Q9NP78 766 aa11.02□□□□□ -0.65
VEGFA-219ENST00000518824 KAAG1Q9UBP8 84 aa11.02□□□□□ -0.65
VEGFA-219ENST00000518824 NKX1-2Q9UD57 310 aaPredicted RBP11.02□□□□□ -0.65
VEGFA-219ENST00000518824 TRAV40A0A0B4J280 105 aa11.01□□□□□ -0.65
VEGFA-219ENST00000518824 A0A1B0GVI7 797 aa11.01□□□□□ -0.65
VEGFA-219ENST00000518824 OR5B21A6NL26 309 aa11.01□□□□□ -0.65
VEGFA-219ENST00000518824 SYT7O43581 403 aa11.01□□□□□ -0.65
VEGFA-219ENST00000518824 IGHA1P01876 353 aa11.01□□□□□ -0.65
VEGFA-219ENST00000518824 MUC1P15941 1255 aaPredicted RBP11.01□□□□□ -0.65
VEGFA-219ENST00000518824 GLRA1P23415 457 aa11.01□□□□□ -0.65
VEGFA-219ENST00000518824 CPT2P23786 658 aa11.01□□□□□ -0.65
VEGFA-219ENST00000518824 HAAOP46952 286 aa11.01□□□□□ -0.65
VEGFA-219ENST00000518824 TGM4P49221 684 aa11.01□□□□□ -0.65
VEGFA-219ENST00000518824 CEBPDP49716 269 aaPredicted RBP11.01□□□□□ -0.65
VEGFA-219ENST00000518824 DLX1P56177 255 aa11.01□□□□□ -0.65
VEGFA-219ENST00000518824 ADARB1P78563 741 aaKnown RBP11.01□□□□□ -0.65
VEGFA-219ENST00000518824 IKZF1Q13422 519 aa11.01□□□□□ -0.65
VEGFA-219ENST00000518824 KCNJ8Q15842 424 aa11.01□□□□□ -0.65
VEGFA-219ENST00000518824 DGUOKQ16854 277 aa11.01□□□□□ -0.65
VEGFA-219ENST00000518824 ARMCX4Q5H9R4 360 aa11.01□□□□□ -0.65
VEGFA-219ENST00000518824 ZNF691Q5VV52 312 aa11.01□□□□□ -0.65
VEGFA-219ENST00000518824 BTN2A1Q7KYR7 527 aa11.01□□□□□ -0.65
VEGFA-219ENST00000518824 FAM220AQ7Z4H9 259 aa11.01□□□□□ -0.65
VEGFA-219ENST00000518824 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.01□□□□□ -0.65
VEGFA-219ENST00000518824 OR51A4Q8NGJ6 313 aa11.01□□□□□ -0.65
VEGFA-219ENST00000518824 ANGPTL6Q8NI99 470 aa11.01□□□□□ -0.65
VEGFA-219ENST00000518824 CYGBQ8WWM9 190 aa11.01□□□□□ -0.65
VEGFA-219ENST00000518824 UPRTQ96BW1 309 aa11.01□□□□□ -0.65
VEGFA-219ENST00000518824 TBX15Q96SF7 602 aa11.01□□□□□ -0.65
VEGFA-219ENST00000518824 ALG8Q9BVK2 526 aa11.01□□□□□ -0.65
VEGFA-219ENST00000518824 ELL3Q9HB65 397 aaPredicted RBP11.01□□□□□ -0.65
VEGFA-219ENST00000518824 ERVK13-1Q9NX77 482 aa11.01□□□□□ -0.65
VEGFA-219ENST00000518824 DNHD1Q96M86 4753 aa11.01□□□□□ -0.65
VEGFA-219ENST00000518824 IGKV1D-17A0A075B6S4 117 aa11□□□□□ -0.65
VEGFA-219ENST00000518824 IGKV1-9A0A0C4DH69 117 aa11□□□□□ -0.65
VEGFA-219ENST00000518824 MDFIC2A0A1B0GVS7 189 aa11□□□□□ -0.65
VEGFA-219ENST00000518824 ANKRD61A6NGH8 418 aa11□□□□□ -0.65
VEGFA-219ENST00000518824 OR4C45A6NMZ5 311 aa11□□□□□ -0.65
VEGFA-219ENST00000518824 F8VVB4 439 aa11□□□□□ -0.65
VEGFA-219ENST00000518824 F8VWA3 439 aa11□□□□□ -0.65
VEGFA-219ENST00000518824 NDUFA2O43678 99 aa11□□□□□ -0.65
VEGFA-219ENST00000518824 GNAO1P09471 354 aa11□□□□□ -0.65
VEGFA-219ENST00000518824 PSG2P11465 335 aa11□□□□□ -0.65
VEGFA-219ENST00000518824 MMP9P14780 707 aa11□□□□□ -0.65
VEGFA-219ENST00000518824 NPY4RP50391 375 aa11□□□□□ -0.65
VEGFA-219ENST00000518824 ACTC1P68032 377 aa11□□□□□ -0.65
VEGFA-219ENST00000518824 ACTA1P68133 377 aa11□□□□□ -0.65
VEGFA-219ENST00000518824 GALEQ14376 348 aa11□□□□□ -0.65
VEGFA-219ENST00000518824 ATPAF1Q5TC12 328 aaPredicted RBP11□□□□□ -0.65
VEGFA-219ENST00000518824 RUSC1-AS1Q66K80 236 aa11□□□□□ -0.65
VEGFA-219ENST00000518824 LAIR2Q6ISS4 152 aa11□□□□□ -0.65
VEGFA-219ENST00000518824 FDX2Q6P4F2 183 aa11□□□□□ -0.65
VEGFA-219ENST00000518824 BTNL3Q6UXE8 466 aa11□□□□□ -0.65
VEGFA-219ENST00000518824 ZNF788Q6ZQV5 615 aa11□□□□□ -0.65
VEGFA-219ENST00000518824 SIGLECL1Q8N7X8 197 aa11□□□□□ -0.65
VEGFA-219ENST00000518824 ZDHHC22Q8N966 263 aa11□□□□□ -0.65
VEGFA-219ENST00000518824 ZNF555Q8NEP9 628 aa11□□□□□ -0.65
VEGFA-219ENST00000518824 DUX5Q96PT3 197 aa11□□□□□ -0.65
VEGFA-219ENST00000518824 TRIM36Q9NQ86 728 aa11□□□□□ -0.65
VEGFA-219ENST00000518824 MRPS18AQ9NVS2 196 aaKnown RBP11□□□□□ -0.65
VEGFA-219ENST00000518824 NLKQ9UBE8 527 aa11□□□□□ -0.65
VEGFA-219ENST00000518824 DNAJB11Q9UBS4 358 aa11□□□□□ -0.65
VEGFA-219ENST00000518824 ZNF222Q9UK12 451 aa11□□□□□ -0.65
VEGFA-219ENST00000518824 NUP50Q9UKX7 468 aa11□□□□□ -0.65
VEGFA-219ENST00000518824 MAB21L2Q9Y586 359 aa11□□□□□ -0.65
VEGFA-219ENST00000518824 FAM230AA0A1W2PPH8 454 aa10.99□□□□□ -0.65
VEGFA-219ENST00000518824 OR2AT4A6NND4 320 aa10.99□□□□□ -0.65
VEGFA-219ENST00000518824 CASQ2O14958 399 aaPredicted RBP10.99□□□□□ -0.65
VEGFA-219ENST00000518824 ENSAO43768 121 aaKnown RBP10.99□□□□□ -0.65
VEGFA-219ENST00000518824 MPZL2O60487 215 aa10.99□□□□□ -0.65
VEGFA-219ENST00000518824 INMTO95050 263 aa10.99□□□□□ -0.65
VEGFA-219ENST00000518824 PLATP00750 562 aa10.99□□□□□ -0.65
VEGFA-219ENST00000518824 HTR1AP08908 422 aa10.99□□□□□ -0.65
VEGFA-219ENST00000518824 LIMS3P0CW19 117 aa10.99□□□□□ -0.65
VEGFA-219ENST00000518824 LIMS4P0CW20 117 aa10.99□□□□□ -0.65
VEGFA-219ENST00000518824 PGA5P0DJD9 388 aa10.99□□□□□ -0.65
VEGFA-219ENST00000518824 GABRA2P47869 451 aa10.99□□□□□ -0.65
VEGFA-219ENST00000518824 ETV1P50549 477 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms