RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 DUX3Q96PT4 197 aa8.34□□□□□ -1.07
CLDND1-231ENST00000515620 P2RX4Q99571 388 aa8.34□□□□□ -1.07
CLDND1-231ENST00000515620 IFT27Q9BW83 186 aa8.34□□□□□ -1.07
CLDND1-231ENST00000515620 LIN7BQ9HAP6 207 aa8.34□□□□□ -1.07
CLDND1-231ENST00000515620 DNAJC27Q9NZQ0 273 aa8.34□□□□□ -1.07
CLDND1-231ENST00000515620 MPC1Q9Y5U8 109 aa8.34□□□□□ -1.07
CLDND1-231ENST00000515620 COMMD3-BMI1R4GMX3 469 aa8.34□□□□□ -1.07
CLDND1-231ENST00000515620 PSMB11A5LHX3 300 aa8.33□□□□□ -1.08
CLDND1-231ENST00000515620 RFPL4AA6NLU0 287 aa8.33□□□□□ -1.08
CLDND1-231ENST00000515620 C17orf98A8MV24 154 aa8.33□□□□□ -1.08
CLDND1-231ENST00000515620 RFPL4AL1F8VTS6 287 aa8.33□□□□□ -1.08
CLDND1-231ENST00000515620 SLC1A7O00341 560 aa8.33□□□□□ -1.08
CLDND1-231ENST00000515620 ARPC3O15145 178 aa8.33□□□□□ -1.08
CLDND1-231ENST00000515620 MTRF1O75570 445 aaKnown RBP8.33□□□□□ -1.08
CLDND1-231ENST00000515620 H1F0P07305 194 aaKnown RBP8.33□□□□□ -1.08
CLDND1-231ENST00000515620 PGA5P0DJD9 388 aa8.33□□□□□ -1.08
CLDND1-231ENST00000515620 CFL1P23528 166 aaKnown RBP8.33□□□□□ -1.08
CLDND1-231ENST00000515620 MYCNOSP40205 109 aa8.33□□□□□ -1.08
CLDND1-231ENST00000515620 GPM6AP51674 278 aa8.33□□□□□ -1.08
CLDND1-231ENST00000515620 EIF2B1Q14232 305 aaKnown RBP8.33□□□□□ -1.08
CLDND1-231ENST00000515620 SEC23BQ15437 767 aa8.33□□□□□ -1.08
CLDND1-231ENST00000515620 SNCBQ16143 134 aa8.33□□□□□ -1.08
CLDND1-231ENST00000515620 SLC35F1Q5T1Q4 408 aa8.33□□□□□ -1.08
CLDND1-231ENST00000515620 ZNF770Q6IQ21 691 aaPredicted RBP8.33□□□□□ -1.08
CLDND1-231ENST00000515620 WDR93Q6P2C0 686 aa8.33□□□□□ -1.08
CLDND1-231ENST00000515620 FKBP9P1Q75LS8 142 aa8.33□□□□□ -1.08
CLDND1-231ENST00000515620 CROCCP2Q86T23 111 aa8.33□□□□□ -1.08
CLDND1-231ENST00000515620 SBSPONQ8IVN8 264 aa8.33□□□□□ -1.08
CLDND1-231ENST00000515620 LINC00471Q8N535 108 aa8.33□□□□□ -1.08
CLDND1-231ENST00000515620 OR51L1Q8NGJ5 315 aa8.33□□□□□ -1.08
CLDND1-231ENST00000515620 HSH2DQ96JZ2 352 aa8.33□□□□□ -1.08
CLDND1-231ENST00000515620 SLC25A33Q9BSK2 321 aa8.33□□□□□ -1.08
CLDND1-231ENST00000515620 OR52D1Q9H346 318 aa8.33□□□□□ -1.08
CLDND1-231ENST00000515620 ABCB9Q9NP78 766 aa8.33□□□□□ -1.08
CLDND1-231ENST00000515620 BRD7Q9NPI1 651 aa8.33□□□□□ -1.08
CLDND1-231ENST00000515620 KRCC1Q9NPI7 259 aaPredicted RBP8.33□□□□□ -1.08
CLDND1-231ENST00000515620 LYSTQ99698 3801 aa8.32□□□□□ -1.08
CLDND1-231ENST00000515620 TRBV4-1A0A0J9YWV2 114 aa8.32□□□□□ -1.08
CLDND1-231ENST00000515620 A0A1W2PRQ8 180 aa8.32□□□□□ -1.08
CLDND1-231ENST00000515620 SLC22A2O15244 555 aa8.32□□□□□ -1.08
CLDND1-231ENST00000515620 IGHV1-8P0DP01 117 aa8.32□□□□□ -1.08
CLDND1-231ENST00000515620 ACKR3P25106 362 aa8.32□□□□□ -1.08
CLDND1-231ENST00000515620 HSD11B1P28845 292 aa8.32□□□□□ -1.08
CLDND1-231ENST00000515620 SLC15A1P46059 708 aa8.32□□□□□ -1.08
CLDND1-231ENST00000515620 GP2P55259 537 aaKnown RBP8.32□□□□□ -1.08
CLDND1-231ENST00000515620 ZNF121P58317 390 aaPredicted RBP8.32□□□□□ -1.08
CLDND1-231ENST00000515620 GRB2P62993 217 aaKnown RBP8.32□□□□□ -1.08
CLDND1-231ENST00000515620 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.32□□□□□ -1.08
CLDND1-231ENST00000515620 DGCR6Q14129 220 aa8.32□□□□□ -1.08
CLDND1-231ENST00000515620 SMIM21Q3B7S5 101 aa8.32□□□□□ -1.08
CLDND1-231ENST00000515620 FAM76BQ5HYJ3 339 aa8.32□□□□□ -1.08
CLDND1-231ENST00000515620 MINOS1Q5TGZ0 78 aa8.32□□□□□ -1.08
CLDND1-231ENST00000515620 LCN8Q6JVE9 175 aa8.32□□□□□ -1.08
CLDND1-231ENST00000515620 ACP7Q6ZNF0 438 aa8.32□□□□□ -1.08
CLDND1-231ENST00000515620 PRSS45Q7RTY3 260 aa8.32□□□□□ -1.08
CLDND1-231ENST00000515620 KRT77Q7Z794 578 aa8.32□□□□□ -1.08
CLDND1-231ENST00000515620 CALHM1Q8IU99 346 aa8.32□□□□□ -1.08
CLDND1-231ENST00000515620 TIGD4Q8IY51 512 aa8.32□□□□□ -1.08
CLDND1-231ENST00000515620 ZDHHC23Q8IYP9 409 aa8.32□□□□□ -1.08
CLDND1-231ENST00000515620 ZNF561Q8N587 486 aa8.32□□□□□ -1.08
CLDND1-231ENST00000515620 ZNRF4Q8WWF5 429 aa8.32□□□□□ -1.08
CLDND1-231ENST00000515620 PIGCQ92535 297 aa8.32□□□□□ -1.08
CLDND1-231ENST00000515620 OR10A2Q9H208 303 aa8.32□□□□□ -1.08
CLDND1-231ENST00000515620 TBC1D23Q9NUY8 699 aa8.32□□□□□ -1.08
CLDND1-231ENST00000515620 VNN3Q9NY84 501 aa8.32□□□□□ -1.08
CLDND1-231ENST00000515620 ZNF319Q9P2F9 582 aa8.32□□□□□ -1.08
CLDND1-231ENST00000515620 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.32□□□□□ -1.08
CLDND1-231ENST00000515620 ENPP4Q9Y6X5 453 aa8.32□□□□□ -1.08
CLDND1-231ENST00000515620 MINOS1-NBL1R4GNA1 71 aa8.32□□□□□ -1.08
CLDND1-231ENST00000515620 V9GYY5 206 aaPredicted RBP8.32□□□□□ -1.08
CLDND1-231ENST00000515620 DNAH7Q8WXX0 4024 aa8.32□□□□□ -1.08
CLDND1-231ENST00000515620 DHRS12A0PJE2 317 aa8.31□□□□□ -1.08
CLDND1-231ENST00000515620 MRASO14807 208 aa8.31□□□□□ -1.08
CLDND1-231ENST00000515620 LY86O95711 162 aa8.31□□□□□ -1.08
CLDND1-231ENST00000515620 CST4P01036 141 aa8.31□□□□□ -1.08
CLDND1-231ENST00000515620 RBP4P02753 201 aa8.31□□□□□ -1.08
CLDND1-231ENST00000515620 AMY1AP04745 511 aa8.31□□□□□ -1.08
CLDND1-231ENST00000515620 AMY2AP04746 511 aa8.31□□□□□ -1.08
CLDND1-231ENST00000515620 SNRNP70P08621 437 aaKnown RBP8.31□□□□□ -1.08
CLDND1-231ENST00000515620 ZNF728P0DKX0 622 aa8.31□□□□□ -1.08
CLDND1-231ENST00000515620 SLC6A1P30531 599 aa8.31□□□□□ -1.08
CLDND1-231ENST00000515620 PRDX2P32119 198 aa8.31□□□□□ -1.08
CLDND1-231ENST00000515620 ACTA2P62736 377 aa8.31□□□□□ -1.08
CLDND1-231ENST00000515620 ACTG2P63267 376 aa8.31□□□□□ -1.08
CLDND1-231ENST00000515620 ACTC1P68032 377 aa8.31□□□□□ -1.08
CLDND1-231ENST00000515620 ACTA1P68133 377 aa8.31□□□□□ -1.08
CLDND1-231ENST00000515620 C9orf66Q5T8R8 295 aa8.31□□□□□ -1.08
CLDND1-231ENST00000515620 OR2T4Q8NH00 348 aa8.31□□□□□ -1.08
CLDND1-231ENST00000515620 PGAM5Q96HS1 289 aa8.31□□□□□ -1.08
CLDND1-231ENST00000515620 RAX2Q96IS3 184 aa8.31□□□□□ -1.08
CLDND1-231ENST00000515620 ZNF488Q96MN9 340 aa8.31□□□□□ -1.08
CLDND1-231ENST00000515620 HIST1H2AAQ96QV6 131 aa8.31□□□□□ -1.08
CLDND1-231ENST00000515620 CITED4Q96RK1 184 aa8.31□□□□□ -1.08
CLDND1-231ENST00000515620 OR51I2Q9H344 312 aa8.31□□□□□ -1.08
CLDND1-231ENST00000515620 GMPR2Q9P2T1 348 aaKnown RBP8.31□□□□□ -1.08
CLDND1-231ENST00000515620 ZNF256Q9Y2P7 627 aaPredicted RBP8.31□□□□□ -1.08
CLDND1-231ENST00000515620 SMAD5-AS1Q9Y6J3 95 aa8.31□□□□□ -1.08
CLDND1-231ENST00000515620 ZNF732B4DXR9 585 aa8.3□□□□□ -1.08
CLDND1-231ENST00000515620 SEC14L6B5MCN3 397 aa8.3□□□□□ -1.08
CLDND1-231ENST00000515620 CCL24O00175 119 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms