RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 FCN3O75636 299 aa11.26□□□□□ -0.61
TCOF1-215ENST00000515516 DHRS3O75911 302 aa11.26□□□□□ -0.61
TCOF1-215ENST00000515516 KNG1P01042 644 aa11.26□□□□□ -0.61
TCOF1-215ENST00000515516 ACAA1P09110 424 aaPredicted RBP11.26□□□□□ -0.61
TCOF1-215ENST00000515516 FAHP16930 419 aa11.26□□□□□ -0.61
TCOF1-215ENST00000515516 MDKP21741 143 aaPredicted RBP11.26□□□□□ -0.61
TCOF1-215ENST00000515516 CAPZA1P52907 286 aa11.26□□□□□ -0.61
TCOF1-215ENST00000515516 AADACL4Q5VUY2 407 aa11.26□□□□□ -0.61
TCOF1-215ENST00000515516 C12orf73Q69YU5 71 aa11.26□□□□□ -0.61
TCOF1-215ENST00000515516 KDM4DQ6B0I6 523 aa11.26□□□□□ -0.61
TCOF1-215ENST00000515516 HAGHLQ6PII5 290 aaPredicted RBP11.26□□□□□ -0.61
TCOF1-215ENST00000515516 ZNF788Q6ZQV5 615 aa11.26□□□□□ -0.61
TCOF1-215ENST00000515516 KRT74Q7RTS7 529 aa11.26□□□□□ -0.61
TCOF1-215ENST00000515516 AMIGO2Q86SJ2 522 aa11.26□□□□□ -0.61
TCOF1-215ENST00000515516 GAFA1Q96PS6 74 aa11.26□□□□□ -0.61
TCOF1-215ENST00000515516 APOL4Q9BPW4 351 aa11.26□□□□□ -0.61
TCOF1-215ENST00000515516 CHIAQ9BZP6 476 aa11.26□□□□□ -0.61
TCOF1-215ENST00000515516 FGF23Q9GZV9 251 aaPredicted RBP11.26□□□□□ -0.61
TCOF1-215ENST00000515516 GABARAPL1Q9H0R8 117 aa11.26□□□□□ -0.61
TCOF1-215ENST00000515516 SLITRK2Q9H156 845 aa11.26□□□□□ -0.61
TCOF1-215ENST00000515516 CLN6Q9NWW5 311 aa11.26□□□□□ -0.61
TCOF1-215ENST00000515516 OR52A1Q9UKL2 312 aa11.26□□□□□ -0.61
TCOF1-215ENST00000515516 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.26□□□□□ -0.61
TCOF1-215ENST00000515516 SNX5Q9Y5X3 404 aa11.26□□□□□ -0.61
TCOF1-215ENST00000515516 R4GMQ9 66 aa11.26□□□□□ -0.61
TCOF1-215ENST00000515516 A0A0U1RQK1 487 aa11.25□□□□□ -0.61
TCOF1-215ENST00000515516 M0R129 80 aa11.25□□□□□ -0.61
TCOF1-215ENST00000515516 RHBDL1O75783 438 aa11.25□□□□□ -0.61
TCOF1-215ENST00000515516 KRT8P05787 483 aa11.25□□□□□ -0.61
TCOF1-215ENST00000515516 SELLP14151 372 aa11.25□□□□□ -0.61
TCOF1-215ENST00000515516 AMY2BP19961 511 aa11.25□□□□□ -0.61
TCOF1-215ENST00000515516 ATP6V1E1P36543 226 aa11.25□□□□□ -0.61
TCOF1-215ENST00000515516 RAG2P55895 527 aa11.25□□□□□ -0.61
TCOF1-215ENST00000515516 CAV3P56539 151 aa11.25□□□□□ -0.61
TCOF1-215ENST00000515516 RPL15P61313 204 aaKnown RBP11.25□□□□□ -0.61
TCOF1-215ENST00000515516 MFGE8Q08431 387 aaPredicted RBP11.25□□□□□ -0.61
TCOF1-215ENST00000515516 DGUOKQ16854 277 aa11.25□□□□□ -0.61
TCOF1-215ENST00000515516 CLVS2Q5SYC1 327 aa11.25□□□□□ -0.61
TCOF1-215ENST00000515516 C17orf107Q6ZR85 190 aa11.25□□□□□ -0.61
TCOF1-215ENST00000515516 C1orf122Q6ZSJ8 110 aa11.25□□□□□ -0.61
TCOF1-215ENST00000515516 ZNF573Q86YE8 665 aa11.25□□□□□ -0.61
TCOF1-215ENST00000515516 YIPF7Q8N8F6 280 aa11.25□□□□□ -0.61
TCOF1-215ENST00000515516 TMEM185AQ8NFB2 350 aa11.25□□□□□ -0.61
TCOF1-215ENST00000515516 OR51G2Q8NGK0 314 aa11.25□□□□□ -0.61
TCOF1-215ENST00000515516 C8orf46Q8TAG6 207 aa11.25□□□□□ -0.61
TCOF1-215ENST00000515516 LRTOMTQ8WZ04 291 aa11.25□□□□□ -0.61
TCOF1-215ENST00000515516 AQP3Q92482 292 aa11.25□□□□□ -0.61
TCOF1-215ENST00000515516 DYRK2Q92630 601 aa11.25□□□□□ -0.61
TCOF1-215ENST00000515516 TAF15Q92804 592 aaKnown RBP eCLIP11.25□□□□□ -0.61
TCOF1-215ENST00000515516 PPP1R14AQ96A00 147 aa11.25□□□□□ -0.61
TCOF1-215ENST00000515516 ZNF696Q9H7X3 374 aa11.25□□□□□ -0.61
TCOF1-215ENST00000515516 ADGRL4Q9HBW9 690 aa11.25□□□□□ -0.61
TCOF1-215ENST00000515516 SIRT7Q9NRC8 400 aa11.25□□□□□ -0.61
TCOF1-215ENST00000515516 WARS2Q9UGM6 360 aaKnown RBP11.25□□□□□ -0.61
TCOF1-215ENST00000515516 MMP24Q9Y5R2 645 aa11.25□□□□□ -0.61
TCOF1-215ENST00000515516 A0A1W2PPH5 198 aa11.24□□□□□ -0.61
TCOF1-215ENST00000515516 PRR32B1ATL7 298 aa11.24□□□□□ -0.61
TCOF1-215ENST00000515516 M0R1W7 72 aa11.24□□□□□ -0.61
TCOF1-215ENST00000515516 DLGAP1O14490 977 aa11.24□□□□□ -0.61
TCOF1-215ENST00000515516 PAHP00439 452 aa11.24□□□□□ -0.61
TCOF1-215ENST00000515516 IGLV3-1P01715 115 aa11.24□□□□□ -0.61
TCOF1-215ENST00000515516 TTRP02766 147 aa11.24□□□□□ -0.61
TCOF1-215ENST00000515516 FBP1P09467 338 aa11.24□□□□□ -0.61
TCOF1-215ENST00000515516 PSG2P11465 335 aa11.24□□□□□ -0.61
TCOF1-215ENST00000515516 EPHA2P29317 976 aa11.24□□□□□ -0.61
TCOF1-215ENST00000515516 HAAOP46952 286 aa11.24□□□□□ -0.61
TCOF1-215ENST00000515516 EFNB1P98172 346 aa11.24□□□□□ -0.61
TCOF1-215ENST00000515516 SMIM21Q3B7S5 101 aa11.24□□□□□ -0.61
TCOF1-215ENST00000515516 DMRTC1Q5HYR2 192 aa11.24□□□□□ -0.61
TCOF1-215ENST00000515516 PRR31Q5SQ13 230 aa11.24□□□□□ -0.61
TCOF1-215ENST00000515516 NCR3LG1Q68D85 454 aa11.24□□□□□ -0.61
TCOF1-215ENST00000515516 METAP1DQ6UB28 335 aaPredicted RBP11.24□□□□□ -0.61
TCOF1-215ENST00000515516 ASRGL1Q7L266 308 aa11.24□□□□□ -0.61
TCOF1-215ENST00000515516 LDLRAD3Q86YD5 345 aa11.24□□□□□ -0.61
TCOF1-215ENST00000515516 ELMOD2Q8IZ81 293 aa11.24□□□□□ -0.61
TCOF1-215ENST00000515516 DUS3LQ96G46 650 aaKnown RBP11.24□□□□□ -0.61
TCOF1-215ENST00000515516 CENPNQ96H22 339 aaPredicted RBP11.24□□□□□ -0.61
TCOF1-215ENST00000515516 CIB1Q99828 191 aa11.24□□□□□ -0.61
TCOF1-215ENST00000515516 ADI1Q9BV57 179 aa11.24□□□□□ -0.61
TCOF1-215ENST00000515516 SEMA6AQ9H2E6 1030 aa11.24□□□□□ -0.61
TCOF1-215ENST00000515516 RIBC2Q9H4K1 309 aa11.24□□□□□ -0.61
TCOF1-215ENST00000515516 METTL8Q9H825 291 aaKnown RBP11.24□□□□□ -0.61
TCOF1-215ENST00000515516 GPR173Q9NS66 373 aa11.24□□□□□ -0.61
TCOF1-215ENST00000515516 C1RLQ9NZP8 487 aa11.24□□□□□ -0.61
TCOF1-215ENST00000515516 POLDIP2Q9Y2S7 368 aa11.24□□□□□ -0.61
TCOF1-215ENST00000515516 TRBV23-1A0A0A0MS06 115 aa11.23□□□□□ -0.61
TCOF1-215ENST00000515516 A0A1W2PRD5 423 aa11.23□□□□□ -0.61
TCOF1-215ENST00000515516 A0A1W2PRF3 423 aa11.23□□□□□ -0.61
TCOF1-215ENST00000515516 A0A1W2PRM7 423 aa11.23□□□□□ -0.61
TCOF1-215ENST00000515516 H0YAE9 185 aa11.23□□□□□ -0.61
TCOF1-215ENST00000515516 SLC1A7O00341 560 aa11.23□□□□□ -0.61
TCOF1-215ENST00000515516 NPFFO15130 113 aa11.23□□□□□ -0.61
TCOF1-215ENST00000515516 MAGEB4O15481 346 aaPredicted RBP11.23□□□□□ -0.61
TCOF1-215ENST00000515516 RPP14O95059 124 aaKnown RBP11.23□□□□□ -0.61
TCOF1-215ENST00000515516 NDUFA7O95182 113 aa11.23□□□□□ -0.61
TCOF1-215ENST00000515516 IGHV4-59P01825 116 aa11.23□□□□□ -0.61
TCOF1-215ENST00000515516 TFF1P04155 84 aa11.23□□□□□ -0.61
TCOF1-215ENST00000515516 OR2T7P0C7T2 308 aa11.23□□□□□ -0.61
TCOF1-215ENST00000515516 HTR1FP30939 366 aa11.23□□□□□ -0.61
TCOF1-215ENST00000515516 IER3P46695 156 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms