RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 ICAM4Q14773 271 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 ARL6IP1Q15041 203 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 KCNMB1Q16558 191 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 HNRNPA1L2Q32P51 320 aaKnown RBP11.32□□□□□ -0.6
SMAD1-215ENST00000515385 TANGO2Q6ICL3 276 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 SULF2Q8IWU5 870 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 NAXEQ8NCW5 288 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 CSNK2A3Q8NEV1 391 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 SEMA6DQ8NFY4 1073 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 VSTM2LQ96N03 204 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 URM1Q9BTM9 101 aaKnown RBP11.32□□□□□ -0.6
SMAD1-215ENST00000515385 HDAC8Q9BY41 377 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 SH3BGRL3Q9H299 93 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 NSG1A0A0A6YYJ2 146 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 A0A1W2PN81 502 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 K7EQS6 105 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 TNFSF14O43557 240 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 SLC16A7O60669 478 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 KNG1P01042 644 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 RPLP1P05386 114 aaKnown RBP11.31□□□□□ -0.6
SMAD1-215ENST00000515385 ZNF93P35789 620 aaPredicted RBP11.31□□□□□ -0.6
SMAD1-215ENST00000515385 CHRNA7P36544 502 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 RPL27P61353 136 aaKnown RBP11.31□□□□□ -0.6
SMAD1-215ENST00000515385 EGR4Q05215 589 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 ZP2Q05996 745 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.31□□□□□ -0.6
SMAD1-215ENST00000515385 CHRFAM7AQ494W8 412 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 PLAC9Q5JTB6 97 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 RTL6Q6ICC9 239 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 LCN10Q6JVE6 187 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 DPPA3Q6W0C5 159 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 ZNF519Q8TB69 540 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 NEK7Q8TDX7 302 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 SRD5A3Q9H8P0 318 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 PHPT1Q9NRX4 125 aaPredicted RBP11.31□□□□□ -0.6
SMAD1-215ENST00000515385 SH3BGRL2Q9UJC5 107 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 PRR19A6NJB7 356 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 PPP5D1E7EU14 171 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 P2RY10O00398 339 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 APODP05090 189 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 NPSP0C0P6 89 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 KLK2P20151 261 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 FOXK1P85037 733 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 SP5Q6BEB4 398 aaPredicted RBP11.31□□□□□ -0.6
SMAD1-215ENST00000515385 MARCH3Q86UD3 253 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 SLC39A11Q8N1S5 342 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 SLC35G3Q8N808 338 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 CYB561D1Q8N8Q1 229 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 TMEM52Q8NDY8 209 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 OR2G3Q8NGZ4 309 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 TAAR8Q969N4 342 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 MRPL24Q96A35 216 aaKnown RBP11.31□□□□□ -0.6
SMAD1-215ENST00000515385 NICN1Q9BSH3 213 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 ANGPTL4Q9BY76 406 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 LRIT1Q9P2V4 623 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 MYOTQ9UBF9 498 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 PILRAQ9UKJ1 303 aa11.31□□□□□ -0.6
SMAD1-215ENST00000515385 A0A0A6YYD4 124 aa11.3□□□□□ -0.6
SMAD1-215ENST00000515385 NRG2O14511 850 aaPredicted RBP11.3□□□□□ -0.6
SMAD1-215ENST00000515385 TP53I11O14683 189 aa11.3□□□□□ -0.6
SMAD1-215ENST00000515385 RRP8O43159 456 aaKnown RBP11.3□□□□□ -0.6
SMAD1-215ENST00000515385 CDC14BO60729 498 aa11.3□□□□□ -0.6
SMAD1-215ENST00000515385 CA11O75493 328 aa11.3□□□□□ -0.6
SMAD1-215ENST00000515385 MPIG6BO95866 241 aa11.3□□□□□ -0.6
SMAD1-215ENST00000515385 APLNRP35414 380 aa11.3□□□□□ -0.6
SMAD1-215ENST00000515385 CSNK1A1P48729 337 aa11.3□□□□□ -0.6
SMAD1-215ENST00000515385 PDLIM4P50479 330 aa11.3□□□□□ -0.6
SMAD1-215ENST00000515385 SNU13P55769 128 aaKnown RBP11.3□□□□□ -0.6
SMAD1-215ENST00000515385 CCL20P78556 96 aa11.3□□□□□ -0.6
SMAD1-215ENST00000515385 NOXO1Q8NFA2 376 aa11.3□□□□□ -0.6
SMAD1-215ENST00000515385 OR4C3Q8NH37 302 aa11.3□□□□□ -0.6
SMAD1-215ENST00000515385 TMEM18Q96B42 140 aa11.3□□□□□ -0.6
SMAD1-215ENST00000515385 TMEM59Q9BXS4 323 aa11.3□□□□□ -0.6
SMAD1-215ENST00000515385 GPR84Q9NQS5 396 aa11.3□□□□□ -0.6
SMAD1-215ENST00000515385 TMEM74BQ9NUR3 256 aa11.3□□□□□ -0.6
SMAD1-215ENST00000515385 MRPS28Q9Y2Q9 187 aaKnown RBP11.3□□□□□ -0.6
SMAD1-215ENST00000515385 A0A1B0GU03 582 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 SOCS1O15524 211 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 ST8SIA3O43173 380 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 LMX1BO60663 402 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 DIRAS3O95661 229 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 MT-ATP6P00846 226 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 ZNF823P16415 610 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 P2RY2P41231 377 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 KIR2DS3Q14952 304 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 TCEA2Q15560 299 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 C4orf17Q53FE4 359 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 C1orf194Q5T5A4 169 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 GLIPR1L1Q6UWM5 242 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 ZNF573Q86YE8 665 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.29□□□□□ -0.6
SMAD1-215ENST00000515385 CA13Q8N1Q1 262 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 BCORP1Q8N888 145 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 LRTM2Q8N967 370 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 OR4X1Q8NH49 305 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 OR14L1PQ8NHC6 308 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 DNASE2BQ8WZ79 361 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 TXNIPQ9H3M7 391 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 AK3Q9UIJ7 227 aa11.29□□□□□ -0.6
SMAD1-215ENST00000515385 LIPGQ9Y5X9 500 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms