RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 USE1Q9NZ43 259 aa20.25■□□□□ 0.83
SNF8-213ENST00000514929 NLKQ9UBE8 527 aa20.25■□□□□ 0.83
SNF8-213ENST00000514929 SLC22A13Q9Y226 551 aa20.25■□□□□ 0.83
SNF8-213ENST00000514929 V9GYS6 101 aa20.25■□□□□ 0.83
SNF8-213ENST00000514929 MDFIC2A0A1B0GVS7 189 aa20.24■□□□□ 0.83
SNF8-213ENST00000514929 METTL15A6NJ78 407 aa20.24■□□□□ 0.83
SNF8-213ENST00000514929 CFPP27918 469 aa20.24■□□□□ 0.83
SNF8-213ENST00000514929 PDCD1Q15116 288 aa20.24■□□□□ 0.83
SNF8-213ENST00000514929 CLVS2Q5SYC1 327 aa20.24■□□□□ 0.83
SNF8-213ENST00000514929 RUSC1-AS1Q66K80 236 aa20.24■□□□□ 0.83
SNF8-213ENST00000514929 C3orf56Q8N813 242 aa20.24■□□□□ 0.83
SNF8-213ENST00000514929 TRUB1Q8WWH5 349 aaKnown RBP20.24■□□□□ 0.83
SNF8-213ENST00000514929 TMIGD2Q96BF3 282 aa20.24■□□□□ 0.83
SNF8-213ENST00000514929 MED30Q96HR3 178 aa20.24■□□□□ 0.83
SNF8-213ENST00000514929 A0A1B0GTI1 187 aa20.23■□□□□ 0.83
SNF8-213ENST00000514929 OR2AT4A6NND4 320 aa20.23■□□□□ 0.83
SNF8-213ENST00000514929 EBAG9O00559 213 aa20.23■□□□□ 0.83
SNF8-213ENST00000514929 TFF1P04155 84 aa20.23■□□□□ 0.83
SNF8-213ENST00000514929 SELLP14151 372 aa20.23■□□□□ 0.83
SNF8-213ENST00000514929 ALDH3A2P51648 485 aa20.23■□□□□ 0.83
SNF8-213ENST00000514929 IL13RA1P78552 427 aa20.23■□□□□ 0.83
SNF8-213ENST00000514929 SLC9A3R2Q15599 337 aa20.23■□□□□ 0.83
SNF8-213ENST00000514929 DEFB112Q30KQ8 113 aa20.23■□□□□ 0.83
SNF8-213ENST00000514929 ZIK1Q3SY52 487 aaPredicted RBP20.23■□□□□ 0.83
SNF8-213ENST00000514929 ZNF788Q6ZQV5 615 aa20.23■□□□□ 0.83
SNF8-213ENST00000514929 OR14K1Q8NGZ2 314 aa20.23■□□□□ 0.83
SNF8-213ENST00000514929 ANGPTL6Q8NI99 470 aa20.23■□□□□ 0.83
SNF8-213ENST00000514929 AQP3Q92482 292 aa20.23■□□□□ 0.83
SNF8-213ENST00000514929 H1FXQ92522 213 aaKnown RBP20.23■□□□□ 0.83
SNF8-213ENST00000514929 LHX4Q969G2 390 aa20.23■□□□□ 0.83
SNF8-213ENST00000514929 UBE2FQ969M7 185 aa20.23■□□□□ 0.83
SNF8-213ENST00000514929 GAFA1Q96PS6 74 aa20.23■□□□□ 0.83
SNF8-213ENST00000514929 GPR173Q9NS66 373 aa20.23■□□□□ 0.83
SNF8-213ENST00000514929 ONECUT1Q9UBC0 465 aa20.23■□□□□ 0.83
SNF8-213ENST00000514929 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.23■□□□□ 0.83
SNF8-213ENST00000514929 KPTNQ9Y664 436 aa20.23■□□□□ 0.83
SNF8-213ENST00000514929 CENPVL3A0A0U1RRI6 287 aa20.22■□□□□ 0.83
SNF8-213ENST00000514929 A6NIN4 97 aa20.22■□□□□ 0.83
SNF8-213ENST00000514929 CLDN34H7C241 214 aa20.22■□□□□ 0.83
SNF8-213ENST00000514929 DLGAP1O14490 977 aa20.22■□□□□ 0.83
SNF8-213ENST00000514929 SULT1C4O75897 302 aa20.22■□□□□ 0.83
SNF8-213ENST00000514929 RNASE1P07998 156 aaKnown RBP20.22■□□□□ 0.83
SNF8-213ENST00000514929 GABRA2P47869 451 aa20.22■□□□□ 0.83
SNF8-213ENST00000514929 ODF4Q2M2E3 257 aa20.22■□□□□ 0.83
SNF8-213ENST00000514929 CDONQ4KMG0 1287 aa20.22■□□□□ 0.83
SNF8-213ENST00000514929 CATSPERDQ86XM0 798 aa20.22■□□□□ 0.83
SNF8-213ENST00000514929 LY6G5BQ8NDX9 201 aa20.22■□□□□ 0.83
SNF8-213ENST00000514929 GATAD2BQ8WXI9 593 aa20.22■□□□□ 0.83
SNF8-213ENST00000514929 HRASLS5Q96KN8 279 aa20.22■□□□□ 0.83
SNF8-213ENST00000514929 A0A1B0GVI7 797 aa20.21■□□□□ 0.83
SNF8-213ENST00000514929 DHRS7CA6NNS2 312 aa20.21■□□□□ 0.83
SNF8-213ENST00000514929 HKR1P10072 659 aa20.21■□□□□ 0.83
SNF8-213ENST00000514929 DGUOKQ16854 277 aa20.21■□□□□ 0.83
SNF8-213ENST00000514929 AWAT1Q58HT5 328 aa20.21■□□□□ 0.83
SNF8-213ENST00000514929 TMEM42Q69YG0 159 aa20.21■□□□□ 0.83
SNF8-213ENST00000514929 FAM220AQ7Z4H9 259 aa20.21■□□□□ 0.83
SNF8-213ENST00000514929 ZNF573Q86YE8 665 aa20.21■□□□□ 0.83
SNF8-213ENST00000514929 CMTM4Q8IZR5 234 aa20.21■□□□□ 0.83
SNF8-213ENST00000514929 CBR4Q8N4T8 237 aa20.21■□□□□ 0.83
SNF8-213ENST00000514929 RORBQ92753 470 aa20.21■□□□□ 0.83
SNF8-213ENST00000514929 DCTN5Q9BTE1 182 aa20.21■□□□□ 0.83
SNF8-213ENST00000514929 PLEKHA1Q9HB21 404 aa20.21■□□□□ 0.83
SNF8-213ENST00000514929 SLC25A10Q9UBX3 287 aaPredicted RBP20.21■□□□□ 0.83
SNF8-213ENST00000514929 TENM1Q9UKZ4 2725 aa20.21■□□□□ 0.83
SNF8-213ENST00000514929 IGHV1-69DA0A0B4J2H0 117 aa20.2■□□□□ 0.82
SNF8-213ENST00000514929 SIGLEC5O15389 551 aa20.2■□□□□ 0.82
SNF8-213ENST00000514929 HOXA3O43365 443 aaPredicted RBP20.2■□□□□ 0.82
SNF8-213ENST00000514929 ENTPD6O75354 484 aa20.2■□□□□ 0.82
SNF8-213ENST00000514929 IGHV1-69P01742 117 aa20.2■□□□□ 0.82
SNF8-213ENST00000514929 ACAA1P09110 424 aaPredicted RBP20.2■□□□□ 0.82
SNF8-213ENST00000514929 PSG2P11465 335 aa20.2■□□□□ 0.82
SNF8-213ENST00000514929 NDUFB7P17568 137 aa20.2■□□□□ 0.82
SNF8-213ENST00000514929 CCL1P22362 96 aa20.2■□□□□ 0.82
SNF8-213ENST00000514929 HAAOP46952 286 aa20.2■□□□□ 0.82
SNF8-213ENST00000514929 FOXL1Q12952 345 aa20.2■□□□□ 0.82
SNF8-213ENST00000514929 Q6ZSR3 168 aa20.2■□□□□ 0.82
SNF8-213ENST00000514929 DMRTB1Q96MA1 342 aa20.2■□□□□ 0.82
SNF8-213ENST00000514929 ADI1Q9BV57 179 aa20.2■□□□□ 0.82
SNF8-213ENST00000514929 ACOXLQ9NUZ1 547 aa20.2■□□□□ 0.82
SNF8-213ENST00000514929 RASL12Q9NYN1 266 aa20.2■□□□□ 0.82
SNF8-213ENST00000514929 GNG8Q9UK08 70 aa20.2■□□□□ 0.82
SNF8-213ENST00000514929 H3BSH0 61 aa20.19■□□□□ 0.82
SNF8-213ENST00000514929 J3QT63 122 aa20.19■□□□□ 0.82
SNF8-213ENST00000514929 SYT7O43581 403 aa20.19■□□□□ 0.82
SNF8-213ENST00000514929 MEDAGQ5VYS4 303 aa20.19■□□□□ 0.82
SNF8-213ENST00000514929 VMO1Q7Z5L0 202 aa20.19■□□□□ 0.82
SNF8-213ENST00000514929 POC1AQ8NBT0 407 aa20.19■□□□□ 0.82
SNF8-213ENST00000514929 RNFT2Q96EX2 444 aa20.19■□□□□ 0.82
SNF8-213ENST00000514929 C9orf16Q9BUW7 83 aa20.19■□□□□ 0.82
SNF8-213ENST00000514929 PRDM13Q9H4Q3 707 aa20.19■□□□□ 0.82
SNF8-213ENST00000514929 NOX4Q9NPH5 578 aa20.19■□□□□ 0.82
SNF8-213ENST00000514929 POLDIP2Q9Y2S7 368 aa20.19■□□□□ 0.82
SNF8-213ENST00000514929 IGKV1D-17A0A075B6S4 117 aa20.18■□□□□ 0.82
SNF8-213ENST00000514929 PQLC2LA1A4F0 135 aa20.18■□□□□ 0.82
SNF8-213ENST00000514929 ANKRD61A6NGH8 418 aa20.18■□□□□ 0.82
SNF8-213ENST00000514929 SYNGR1O43759 233 aa20.18■□□□□ 0.82
SNF8-213ENST00000514929 SNRPGP62308 76 aaKnown RBP20.18■□□□□ 0.82
SNF8-213ENST00000514929 ACTC1P68032 377 aa20.18■□□□□ 0.82
SNF8-213ENST00000514929 ACTA1P68133 377 aa20.18■□□□□ 0.82
SNF8-213ENST00000514929 ZNF85Q03923 595 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms