RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 CXCL3P19876 107 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 COX5AP20674 150 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 ERP29P30040 261 aaKnown RBP12.9□□□□□ -0.34
VCAN-211ENST00000513984 BLVRBP30043 206 aaPredicted RBP12.9□□□□□ -0.34
VCAN-211ENST00000513984 WNT5AP41221 380 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 CBX5P45973 191 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 GZMKP49863 264 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 NHLH1Q02575 133 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 RSU1Q15404 277 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 OR52W1Q6IF63 320 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 IDO2Q6ZQW0 420 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 CSNK2A3Q8NEV1 391 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 SLC30A7Q8NEW0 376 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 ST8SIA4Q92187 359 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 SLC6A7Q99884 636 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 OCSTAMPQ9BR26 566 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 PTTG3PQ9NZH4 202 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 DKK4Q9UBT3 224 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 PLEKHA6Q9Y2H5 1048 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 ESPL1Q14674 2120 aa12.89□□□□□ -0.35
VCAN-211ENST00000513984 MEIKINA0A087WXM9 373 aa12.89□□□□□ -0.35
VCAN-211ENST00000513984 ZNF850A8MQ14 1090 aa12.89□□□□□ -0.35
VCAN-211ENST00000513984 SERPINE3A8MV23 424 aa12.89□□□□□ -0.35
VCAN-211ENST00000513984 J3QW42 95 aa12.89□□□□□ -0.35
VCAN-211ENST00000513984 ANGPTL7O43827 346 aa12.89□□□□□ -0.35
VCAN-211ENST00000513984 CREBL2O60519 120 aaPredicted RBP12.89□□□□□ -0.35
VCAN-211ENST00000513984 ZNF14P17017 642 aaPredicted RBP12.89□□□□□ -0.35
VCAN-211ENST00000513984 SPINK2P20155 84 aa12.89□□□□□ -0.35
VCAN-211ENST00000513984 PDZK1IP1Q13113 114 aa12.89□□□□□ -0.35
VCAN-211ENST00000513984 HLXQ14774 488 aaPredicted RBP12.89□□□□□ -0.35
VCAN-211ENST00000513984 GABRA6Q16445 453 aa12.89□□□□□ -0.35
VCAN-211ENST00000513984 VWA1Q6PCB0 445 aa12.89□□□□□ -0.35
VCAN-211ENST00000513984 CNEP1R1Q8N9A8 125 aa12.89□□□□□ -0.35
VCAN-211ENST00000513984 SNAPC3Q92966 411 aa12.89□□□□□ -0.35
VCAN-211ENST00000513984 PRRT1Q99946 306 aa12.89□□□□□ -0.35
VCAN-211ENST00000513984 SCNM1Q9BWG6 230 aa12.89□□□□□ -0.35
VCAN-211ENST00000513984 PAPOLGQ9BWT3 736 aaKnown RBP12.89□□□□□ -0.35
VCAN-211ENST00000513984 PECRQ9BY49 303 aa12.89□□□□□ -0.35
VCAN-211ENST00000513984 ALX4Q9H161 411 aaPredicted RBP12.89□□□□□ -0.35
VCAN-211ENST00000513984 POFUT1Q9H488 388 aa12.89□□□□□ -0.35
VCAN-211ENST00000513984 GPR160Q9UJ42 338 aa12.89□□□□□ -0.35
VCAN-211ENST00000513984 LHX6Q9UPM6 363 aa12.89□□□□□ -0.35
VCAN-211ENST00000513984 NPTNQ9Y639 398 aa12.89□□□□□ -0.35
VCAN-211ENST00000513984 APC2O95996 2303 aa12.88□□□□□ -0.35
VCAN-211ENST00000513984 IGKV1-12A0A0C4DH73 117 aa12.88□□□□□ -0.35
VCAN-211ENST00000513984 MBD3L4A6NDZ8 208 aaPredicted RBP12.88□□□□□ -0.35
VCAN-211ENST00000513984 MBD3L3A6NE82 208 aaPredicted RBP12.88□□□□□ -0.35
VCAN-211ENST00000513984 MBD3L5A6NJ08 208 aaPredicted RBP12.88□□□□□ -0.35
VCAN-211ENST00000513984 K7EM74 188 aa12.88□□□□□ -0.35
VCAN-211ENST00000513984 HTR3BO95264 441 aa12.88□□□□□ -0.35
VCAN-211ENST00000513984 IGKV1D-12P01611 117 aa12.88□□□□□ -0.35
VCAN-211ENST00000513984 CSTBP04080 98 aaKnown RBP12.88□□□□□ -0.35
VCAN-211ENST00000513984 RLN1P04808 185 aa12.88□□□□□ -0.35
VCAN-211ENST00000513984 HOXB1P14653 301 aaPredicted RBP12.88□□□□□ -0.35
VCAN-211ENST00000513984 UBE2NP61088 152 aaKnown RBP12.88□□□□□ -0.35
VCAN-211ENST00000513984 MRPS15P82914 257 aaKnown RBP12.88□□□□□ -0.35
VCAN-211ENST00000513984 PRDX4Q13162 271 aa12.88□□□□□ -0.35
VCAN-211ENST00000513984 PPA1Q15181 289 aa12.88□□□□□ -0.35
VCAN-211ENST00000513984 TBC1D28Q2M2D7 210 aa12.88□□□□□ -0.35
VCAN-211ENST00000513984 RTL6Q6ICC9 239 aa12.88□□□□□ -0.35
VCAN-211ENST00000513984 FTMTQ8N4E7 242 aa12.88□□□□□ -0.35
VCAN-211ENST00000513984 C1orf162Q8NEQ5 155 aaPredicted RBP12.88□□□□□ -0.35
VCAN-211ENST00000513984 OR13C8Q8NGS7 320 aa12.88□□□□□ -0.35
VCAN-211ENST00000513984 MBD3L2Q8NHZ7 208 aaPredicted RBP12.88□□□□□ -0.35
VCAN-211ENST00000513984 WBP1Q96G27 269 aa12.88□□□□□ -0.35
VCAN-211ENST00000513984 ZNF222Q9UK12 451 aa12.88□□□□□ -0.35
VCAN-211ENST00000513984 WASF3Q9UPY6 502 aa12.88□□□□□ -0.35
VCAN-211ENST00000513984 PRRC2CQ9Y520 2896 aaKnown RBP12.88□□□□□ -0.35
VCAN-211ENST00000513984 SPTBN2O15020 2390 aa12.88□□□□□ -0.35
VCAN-211ENST00000513984 PQLC2LA1A4F0 135 aa12.88□□□□□ -0.35
VCAN-211ENST00000513984 MKRN2OSH3BPM6 223 aa12.88□□□□□ -0.35
VCAN-211ENST00000513984 AKR7A2O43488 359 aa12.88□□□□□ -0.35
VCAN-211ENST00000513984 LYZL6O75951 148 aa12.88□□□□□ -0.35
VCAN-211ENST00000513984 PLATP00750 562 aa12.88□□□□□ -0.35
VCAN-211ENST00000513984 CRYABP02511 175 aaKnown RBP12.88□□□□□ -0.35
VCAN-211ENST00000513984 HRH1P35367 487 aa12.88□□□□□ -0.35
VCAN-211ENST00000513984 SF3B4Q15427 424 aaKnown RBP eCLIP12.88□□□□□ -0.35
VCAN-211ENST00000513984 ACTBL2Q562R1 376 aa12.88□□□□□ -0.35
VCAN-211ENST00000513984 ZNF585AQ6P3V2 769 aa12.88□□□□□ -0.35
VCAN-211ENST00000513984 INO80CQ6PI98 192 aaPredicted RBP12.88□□□□□ -0.35
VCAN-211ENST00000513984 RFPL4BQ6ZWI9 263 aa12.88□□□□□ -0.35
VCAN-211ENST00000513984 SPICQ8N5J4 248 aa12.88□□□□□ -0.35
VCAN-211ENST00000513984 ZSCAN4Q8NAM6 433 aaPredicted RBP12.88□□□□□ -0.35
VCAN-211ENST00000513984 OR5L1Q8NGL2 311 aa12.88□□□□□ -0.35
VCAN-211ENST00000513984 MRPS24Q96EL2 167 aaKnown RBP12.88□□□□□ -0.35
VCAN-211ENST00000513984 CYYR1Q96J86 154 aa12.88□□□□□ -0.35
VCAN-211ENST00000513984 GPR137Q96N19 417 aa12.88□□□□□ -0.35
VCAN-211ENST00000513984 MYOZ1Q9NP98 299 aaPredicted RBP12.88□□□□□ -0.35
VCAN-211ENST00000513984 PLSCR4Q9NRQ2 329 aa12.88□□□□□ -0.35
VCAN-211ENST00000513984 CRIM1Q9NZV1 1036 aa12.88□□□□□ -0.35
VCAN-211ENST00000513984 EIF3KQ9UBQ5 218 aaKnown RBP12.88□□□□□ -0.35
VCAN-211ENST00000513984 ACACAQ13085 2346 aa12.87□□□□□ -0.35
VCAN-211ENST00000513984 TMEM82A0PJX8 343 aa12.87□□□□□ -0.35
VCAN-211ENST00000513984 FABP7O15540 132 aa12.87□□□□□ -0.35
VCAN-211ENST00000513984 TNFSF13O75888 250 aa12.87□□□□□ -0.35
VCAN-211ENST00000513984 FOXF2Q12947 444 aa12.87□□□□□ -0.35
VCAN-211ENST00000513984 ARFRP1Q13795 201 aa12.87□□□□□ -0.35
VCAN-211ENST00000513984 CEACAM21Q3KPI0 293 aa12.87□□□□□ -0.35
VCAN-211ENST00000513984 CD163Q86VB7 1156 aa12.87□□□□□ -0.35
VCAN-211ENST00000513984 ZDHHC23Q8IYP9 409 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms