RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 IFT27Q9BW83 186 aa8.34□□□□□ -1.07
CLDND1-227ENST00000513452 LIN7BQ9HAP6 207 aa8.34□□□□□ -1.07
CLDND1-227ENST00000513452 DNAJC27Q9NZQ0 273 aa8.34□□□□□ -1.07
CLDND1-227ENST00000513452 MPC1Q9Y5U8 109 aa8.34□□□□□ -1.07
CLDND1-227ENST00000513452 COMMD3-BMI1R4GMX3 469 aa8.34□□□□□ -1.07
CLDND1-227ENST00000513452 PSMB11A5LHX3 300 aa8.33□□□□□ -1.08
CLDND1-227ENST00000513452 RFPL4AA6NLU0 287 aa8.33□□□□□ -1.08
CLDND1-227ENST00000513452 C17orf98A8MV24 154 aa8.33□□□□□ -1.08
CLDND1-227ENST00000513452 RFPL4AL1F8VTS6 287 aa8.33□□□□□ -1.08
CLDND1-227ENST00000513452 SLC1A7O00341 560 aa8.33□□□□□ -1.08
CLDND1-227ENST00000513452 ARPC3O15145 178 aa8.33□□□□□ -1.08
CLDND1-227ENST00000513452 MTRF1O75570 445 aaKnown RBP8.33□□□□□ -1.08
CLDND1-227ENST00000513452 H1F0P07305 194 aaKnown RBP8.33□□□□□ -1.08
CLDND1-227ENST00000513452 PGA5P0DJD9 388 aa8.33□□□□□ -1.08
CLDND1-227ENST00000513452 CFL1P23528 166 aaKnown RBP8.33□□□□□ -1.08
CLDND1-227ENST00000513452 MYCNOSP40205 109 aa8.33□□□□□ -1.08
CLDND1-227ENST00000513452 GPM6AP51674 278 aa8.33□□□□□ -1.08
CLDND1-227ENST00000513452 EIF2B1Q14232 305 aaKnown RBP8.33□□□□□ -1.08
CLDND1-227ENST00000513452 SEC23BQ15437 767 aa8.33□□□□□ -1.08
CLDND1-227ENST00000513452 SNCBQ16143 134 aa8.33□□□□□ -1.08
CLDND1-227ENST00000513452 SLC35F1Q5T1Q4 408 aa8.33□□□□□ -1.08
CLDND1-227ENST00000513452 ZNF770Q6IQ21 691 aaPredicted RBP8.33□□□□□ -1.08
CLDND1-227ENST00000513452 WDR93Q6P2C0 686 aa8.33□□□□□ -1.08
CLDND1-227ENST00000513452 FKBP9P1Q75LS8 142 aa8.33□□□□□ -1.08
CLDND1-227ENST00000513452 CROCCP2Q86T23 111 aa8.33□□□□□ -1.08
CLDND1-227ENST00000513452 SBSPONQ8IVN8 264 aa8.33□□□□□ -1.08
CLDND1-227ENST00000513452 LINC00471Q8N535 108 aa8.33□□□□□ -1.08
CLDND1-227ENST00000513452 OR51L1Q8NGJ5 315 aa8.33□□□□□ -1.08
CLDND1-227ENST00000513452 HSH2DQ96JZ2 352 aa8.33□□□□□ -1.08
CLDND1-227ENST00000513452 SLC25A33Q9BSK2 321 aa8.33□□□□□ -1.08
CLDND1-227ENST00000513452 OR52D1Q9H346 318 aa8.33□□□□□ -1.08
CLDND1-227ENST00000513452 ABCB9Q9NP78 766 aa8.33□□□□□ -1.08
CLDND1-227ENST00000513452 BRD7Q9NPI1 651 aa8.33□□□□□ -1.08
CLDND1-227ENST00000513452 KRCC1Q9NPI7 259 aaPredicted RBP8.33□□□□□ -1.08
CLDND1-227ENST00000513452 LYSTQ99698 3801 aa8.32□□□□□ -1.08
CLDND1-227ENST00000513452 TRBV4-1A0A0J9YWV2 114 aa8.32□□□□□ -1.08
CLDND1-227ENST00000513452 A0A1W2PRQ8 180 aa8.32□□□□□ -1.08
CLDND1-227ENST00000513452 SLC22A2O15244 555 aa8.32□□□□□ -1.08
CLDND1-227ENST00000513452 IGHV1-8P0DP01 117 aa8.32□□□□□ -1.08
CLDND1-227ENST00000513452 ACKR3P25106 362 aa8.32□□□□□ -1.08
CLDND1-227ENST00000513452 HSD11B1P28845 292 aa8.32□□□□□ -1.08
CLDND1-227ENST00000513452 SLC15A1P46059 708 aa8.32□□□□□ -1.08
CLDND1-227ENST00000513452 GP2P55259 537 aaKnown RBP8.32□□□□□ -1.08
CLDND1-227ENST00000513452 ZNF121P58317 390 aaPredicted RBP8.32□□□□□ -1.08
CLDND1-227ENST00000513452 GRB2P62993 217 aaKnown RBP8.32□□□□□ -1.08
CLDND1-227ENST00000513452 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.32□□□□□ -1.08
CLDND1-227ENST00000513452 DGCR6Q14129 220 aa8.32□□□□□ -1.08
CLDND1-227ENST00000513452 SMIM21Q3B7S5 101 aa8.32□□□□□ -1.08
CLDND1-227ENST00000513452 FAM76BQ5HYJ3 339 aa8.32□□□□□ -1.08
CLDND1-227ENST00000513452 MINOS1Q5TGZ0 78 aa8.32□□□□□ -1.08
CLDND1-227ENST00000513452 LCN8Q6JVE9 175 aa8.32□□□□□ -1.08
CLDND1-227ENST00000513452 ACP7Q6ZNF0 438 aa8.32□□□□□ -1.08
CLDND1-227ENST00000513452 PRSS45Q7RTY3 260 aa8.32□□□□□ -1.08
CLDND1-227ENST00000513452 KRT77Q7Z794 578 aa8.32□□□□□ -1.08
CLDND1-227ENST00000513452 CALHM1Q8IU99 346 aa8.32□□□□□ -1.08
CLDND1-227ENST00000513452 TIGD4Q8IY51 512 aa8.32□□□□□ -1.08
CLDND1-227ENST00000513452 ZDHHC23Q8IYP9 409 aa8.32□□□□□ -1.08
CLDND1-227ENST00000513452 ZNF561Q8N587 486 aa8.32□□□□□ -1.08
CLDND1-227ENST00000513452 ZNRF4Q8WWF5 429 aa8.32□□□□□ -1.08
CLDND1-227ENST00000513452 PIGCQ92535 297 aa8.32□□□□□ -1.08
CLDND1-227ENST00000513452 OR10A2Q9H208 303 aa8.32□□□□□ -1.08
CLDND1-227ENST00000513452 TBC1D23Q9NUY8 699 aa8.32□□□□□ -1.08
CLDND1-227ENST00000513452 VNN3Q9NY84 501 aa8.32□□□□□ -1.08
CLDND1-227ENST00000513452 ZNF319Q9P2F9 582 aa8.32□□□□□ -1.08
CLDND1-227ENST00000513452 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.32□□□□□ -1.08
CLDND1-227ENST00000513452 ENPP4Q9Y6X5 453 aa8.32□□□□□ -1.08
CLDND1-227ENST00000513452 MINOS1-NBL1R4GNA1 71 aa8.32□□□□□ -1.08
CLDND1-227ENST00000513452 V9GYY5 206 aaPredicted RBP8.32□□□□□ -1.08
CLDND1-227ENST00000513452 DNAH7Q8WXX0 4024 aa8.32□□□□□ -1.08
CLDND1-227ENST00000513452 DHRS12A0PJE2 317 aa8.31□□□□□ -1.08
CLDND1-227ENST00000513452 MRASO14807 208 aa8.31□□□□□ -1.08
CLDND1-227ENST00000513452 LY86O95711 162 aa8.31□□□□□ -1.08
CLDND1-227ENST00000513452 CST4P01036 141 aa8.31□□□□□ -1.08
CLDND1-227ENST00000513452 RBP4P02753 201 aa8.31□□□□□ -1.08
CLDND1-227ENST00000513452 AMY1AP04745 511 aa8.31□□□□□ -1.08
CLDND1-227ENST00000513452 AMY2AP04746 511 aa8.31□□□□□ -1.08
CLDND1-227ENST00000513452 SNRNP70P08621 437 aaKnown RBP8.31□□□□□ -1.08
CLDND1-227ENST00000513452 ZNF728P0DKX0 622 aa8.31□□□□□ -1.08
CLDND1-227ENST00000513452 SLC6A1P30531 599 aa8.31□□□□□ -1.08
CLDND1-227ENST00000513452 PRDX2P32119 198 aa8.31□□□□□ -1.08
CLDND1-227ENST00000513452 ACTA2P62736 377 aa8.31□□□□□ -1.08
CLDND1-227ENST00000513452 ACTG2P63267 376 aa8.31□□□□□ -1.08
CLDND1-227ENST00000513452 ACTC1P68032 377 aa8.31□□□□□ -1.08
CLDND1-227ENST00000513452 ACTA1P68133 377 aa8.31□□□□□ -1.08
CLDND1-227ENST00000513452 C9orf66Q5T8R8 295 aa8.31□□□□□ -1.08
CLDND1-227ENST00000513452 OR2T4Q8NH00 348 aa8.31□□□□□ -1.08
CLDND1-227ENST00000513452 KCTD12Q96CX2 325 aaKnown RBP8.31□□□□□ -1.08
CLDND1-227ENST00000513452 PGAM5Q96HS1 289 aa8.31□□□□□ -1.08
CLDND1-227ENST00000513452 RAX2Q96IS3 184 aa8.31□□□□□ -1.08
CLDND1-227ENST00000513452 ZNF488Q96MN9 340 aa8.31□□□□□ -1.08
CLDND1-227ENST00000513452 HIST1H2AAQ96QV6 131 aa8.31□□□□□ -1.08
CLDND1-227ENST00000513452 CITED4Q96RK1 184 aa8.31□□□□□ -1.08
CLDND1-227ENST00000513452 OR51I2Q9H344 312 aa8.31□□□□□ -1.08
CLDND1-227ENST00000513452 GMPR2Q9P2T1 348 aaKnown RBP8.31□□□□□ -1.08
CLDND1-227ENST00000513452 ZNF256Q9Y2P7 627 aaPredicted RBP8.31□□□□□ -1.08
CLDND1-227ENST00000513452 SMAD5-AS1Q9Y6J3 95 aa8.31□□□□□ -1.08
CLDND1-227ENST00000513452 ZNF732B4DXR9 585 aa8.3□□□□□ -1.08
CLDND1-227ENST00000513452 SEC14L6B5MCN3 397 aa8.3□□□□□ -1.08
CLDND1-227ENST00000513452 CCL24O00175 119 aa8.3□□□□□ -1.08
CLDND1-227ENST00000513452 ZNF593O00488 134 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms