RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 CYTIPO60759 359 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 MRPL33O75394 65 aaKnown RBP8.29□□□□□ -1.08
MSH3-203ENST00000512531 CRYABP02511 175 aaKnown RBP8.29□□□□□ -1.08
MSH3-203ENST00000512531 AMY2AP04746 511 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 HPNP05981 417 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 DUX4L2P0CJ85 424 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 DUX4L3P0CJ86 424 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 DUX4L4P0CJ87 422 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 DUX4L5P0CJ88 424 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 DUX4L6P0CJ89 424 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 DUX4L7P0CJ90 424 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 CDAP32320 146 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 TNFSF10P50591 281 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 TAS2R46P59540 309 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 HIST1H3AP68431 136 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 GK2Q14410 553 aaPredicted RBP8.29□□□□□ -1.08
MSH3-203ENST00000512531 RNPS1Q15287 305 aaKnown RBP8.29□□□□□ -1.08
MSH3-203ENST00000512531 KRTAP21-3Q3LHN1 58 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 C4orf46Q504U0 113 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 TMEM177Q53S58 311 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 HIST2H3PS2Q5TEC6 136 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 ZNF626Q68DY1 528 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 ZNF529Q6P280 563 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 Q6ZTK2 550 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 HIST2H3AQ71DI3 136 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 FJX1Q86VR8 437 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 FTMTQ8N4E7 242 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 ZDHHC22Q8N966 263 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 TMEM178AQ8NBL3 297 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 SEMA6DQ8NFY4 1073 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 OR4C16Q8NGL9 310 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 OR10R2Q8NGX6 335 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 OR10D3Q8NH80 312 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 ITLN2Q8WWU7 325 aaPredicted RBP8.29□□□□□ -1.08
MSH3-203ENST00000512531 MEGF10Q96KG7 1140 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 LINC00470Q9BZP3 86 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 RNF122Q9H9V4 155 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 PROK2Q9HC23 129 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 MYOZ1Q9NP98 299 aaPredicted RBP8.29□□□□□ -1.08
MSH3-203ENST00000512531 MGAT4CQ9UBM8 478 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 DUX4Q9UBX2 424 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 MGAT4AQ9UM21 535 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 SLC7A11Q9UPY5 501 aa8.29□□□□□ -1.08
MSH3-203ENST00000512531 NOSIPQ9Y314 301 aaKnown RBP8.29□□□□□ -1.08
MSH3-203ENST00000512531 AKAP9Q99996 3911 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 ZNF587BE7ETH6 402 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 G3V3Y1 287 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 MASP2O00187 686 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 SMAD9O15198 467 aaKnown RBP8.28□□□□□ -1.08
MSH3-203ENST00000512531 XRCC2O43543 280 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 CXCL13O43927 109 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 DOK2O60496 412 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 GMDSO60547 372 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 ACTL6AO96019 429 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 CSTBP04080 98 aaKnown RBP8.28□□□□□ -1.08
MSH3-203ENST00000512531 FCGR2AP12318 317 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 CPT2P23786 658 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 MPZP25189 248 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 AGTR1P30556 359 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 ADMP35318 185 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 CA7P43166 264 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 ARG2P78540 354 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 Q0VFX4 171 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 OR1C1Q15619 314 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 GFOD2Q3B7J2 385 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 CDNFQ49AH0 187 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 ABLIM2Q6H8Q1 611 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 TMEM53Q6P2H8 277 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 FAHD2BQ6P2I3 314 aaPredicted RBP8.28□□□□□ -1.08
MSH3-203ENST00000512531 GLIPR1L1Q6UWM5 242 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 IDO2Q6ZQW0 420 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 SLC16A14Q7RTX9 510 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 TRAPPC6BQ86SZ2 158 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 LRRC18Q8N456 261 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 BPIFB2Q8N4F0 458 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 CLRN3Q8NCR9 226 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 OR2M7Q8NG81 312 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 OR52N4Q8NGI2 321 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 OR8S1Q8NH09 359 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 OR1F12Q8NHA8 337 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 WFDC12Q8WWY7 111 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 AQP3Q92482 292 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 PSMF1Q92530 271 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 RAB3CQ96E17 227 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 SEH1LQ96EE3 360 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 ADAT3Q96EY9 351 aaPredicted RBP8.28□□□□□ -1.08
MSH3-203ENST00000512531 FAHD2AQ96GK7 314 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 RNF170Q96K19 258 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 LURAP1Q96LR2 239 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 ZNF385AQ96PM9 386 aaKnown RBP8.28□□□□□ -1.08
MSH3-203ENST00000512531 CHST5Q9GZS9 411 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 OPA3Q9H6K4 179 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 TMEM38BQ9NVV0 291 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 SLC2A8Q9NY64 477 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 COMMD9Q9P000 198 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 V9GYS6 101 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 HIVEP1P15822 2718 aa8.28□□□□□ -1.08
MSH3-203ENST00000512531 IGHV3-15A0A0B4J1V0 119 aa8.27□□□□□ -1.09
MSH3-203ENST00000512531 A0A1B0GTI1 187 aa8.27□□□□□ -1.09
MSH3-203ENST00000512531 TMEM82A0PJX8 343 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms