RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 ZNF124Q15973 351 aa6.31□□□□□ -1.4
NR1I3-231ENST00000512340 MICBQ29980 383 aa6.31□□□□□ -1.4
NR1I3-231ENST00000512340 CEACAM21Q3KPI0 293 aa6.31□□□□□ -1.4
NR1I3-231ENST00000512340 ESCO2Q56NI9 601 aa6.31□□□□□ -1.4
NR1I3-231ENST00000512340 RPL22L1Q6P5R6 122 aaKnown RBP6.31□□□□□ -1.4
NR1I3-231ENST00000512340 IZUMO2Q6UXV1 221 aa6.31□□□□□ -1.4
NR1I3-231ENST00000512340 MOB3CQ70IA8 216 aa6.31□□□□□ -1.4
NR1I3-231ENST00000512340 LRRC28Q86X40 367 aaPredicted RBP6.31□□□□□ -1.4
NR1I3-231ENST00000512340 ZNF573Q86YE8 665 aa6.31□□□□□ -1.4
NR1I3-231ENST00000512340 CDH26Q8IXH8 852 aa6.31□□□□□ -1.4
NR1I3-231ENST00000512340 SLC38A6Q8IZM9 456 aa6.31□□□□□ -1.4
NR1I3-231ENST00000512340 ZNF565Q8N9K5 539 aa6.31□□□□□ -1.4
NR1I3-231ENST00000512340 BPIFB6Q8NFQ5 453 aa6.31□□□□□ -1.4
NR1I3-231ENST00000512340 OR8B3Q8NGG8 313 aa6.31□□□□□ -1.4
NR1I3-231ENST00000512340 OR52I1Q8NGK6 324 aa6.31□□□□□ -1.4
NR1I3-231ENST00000512340 OR5D14Q8NGL3 314 aa6.31□□□□□ -1.4
NR1I3-231ENST00000512340 OR2G2Q8NGZ5 317 aa6.31□□□□□ -1.4
NR1I3-231ENST00000512340 CNIH3Q8TBE1 160 aa6.31□□□□□ -1.4
NR1I3-231ENST00000512340 GTF3AQ92664 365 aaKnown RBP6.31□□□□□ -1.4
NR1I3-231ENST00000512340 RORBQ92753 470 aa6.31□□□□□ -1.4
NR1I3-231ENST00000512340 YIPF5Q969M3 257 aa6.31□□□□□ -1.4
NR1I3-231ENST00000512340 OR8B2Q96RD0 313 aa6.31□□□□□ -1.4
NR1I3-231ENST00000512340 ZNF665Q9H7R5 613 aa6.31□□□□□ -1.4
NR1I3-231ENST00000512340 G6PC2Q9NQR9 355 aa6.31□□□□□ -1.4
NR1I3-231ENST00000512340 DIABLOQ9NR28 239 aa6.31□□□□□ -1.4
NR1I3-231ENST00000512340 PLCXD1Q9NUJ7 323 aa6.31□□□□□ -1.4
NR1I3-231ENST00000512340 UFSP2Q9NUQ7 469 aa6.31□□□□□ -1.4
NR1I3-231ENST00000512340 ACOXLQ9NUZ1 547 aa6.31□□□□□ -1.4
NR1I3-231ENST00000512340 C1orf123Q9NWV4 160 aa6.31□□□□□ -1.4
NR1I3-231ENST00000512340 NKX1-2Q9UD57 310 aaPredicted RBP6.31□□□□□ -1.4
NR1I3-231ENST00000512340 RAB26Q9ULW5 256 aa6.31□□□□□ -1.4
NR1I3-231ENST00000512340 RHBDD3Q9Y3P4 386 aa6.31□□□□□ -1.4
NR1I3-231ENST00000512340 PCDHGB5Q9Y5G0 923 aa6.31□□□□□ -1.4
NR1I3-231ENST00000512340 CHD3Q12873 2000 aaKnown RBP6.31□□□□□ -1.4
NR1I3-231ENST00000512340 IGHV4-61A0A0C4DH41 118 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 A0A0G2JMP0 313 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 A0A0X1KG70 313 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 LOC107986453A0A1B0GWG9 222 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 ANKRD61A6NGH8 418 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 NKX6-3A6NJ46 265 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 ZNF732B4DXR9 585 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 H0YL77 283 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 J3QRE1 110 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 LGALS8O00214 317 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 LMX1BO60663 402 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 LILRA1O75019 489 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 WBP4O75554 376 aaKnown RBP6.3□□□□□ -1.4
NR1I3-231ENST00000512340 PTBP3O95758 552 aaKnown RBP6.3□□□□□ -1.4
NR1I3-231ENST00000512340 CLIC3O95833 236 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 LY6G6DO95868 133 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 PNPP00491 289 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 IFNA2P01563 188 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 ISG15P05161 165 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 MSMBP08118 114 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 MUC1P15941 1255 aaPredicted RBP6.3□□□□□ -1.4
NR1I3-231ENST00000512340 FAHP16930 419 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 CCL1P22362 96 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 CFHR2P36980 270 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 NPY4RP50391 375 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 ATP1B3P54709 279 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 AQP4P55087 323 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 OR12D2P58182 307 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 MFGE8Q08431 387 aaPredicted RBP6.3□□□□□ -1.4
NR1I3-231ENST00000512340 MAB21L1Q13394 359 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 ALKBH1Q13686 389 aaKnown RBP6.3□□□□□ -1.4
NR1I3-231ENST00000512340 ODF4Q2M2E3 257 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 WDR38Q5JTN6 314 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 C6orf141Q5SZD1 244 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 C6orf52Q5T4I8 152 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 AVPI1Q5T686 147 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 CD276Q5ZPR3 534 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 DCDC5Q6ZRR9 648 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 KRT74Q7RTS7 529 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 SSX6Q7RTT6 188 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 SLC36A1Q7Z2H8 476 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 STX12Q86Y82 276 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 CIARTQ8N365 385 aaPredicted RBP6.3□□□□□ -1.4
NR1I3-231ENST00000512340 BOLLQ8N9W6 283 aaKnown RBP6.3□□□□□ -1.4
NR1I3-231ENST00000512340 OR1M1Q8NGA1 313 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 OR4M2Q8NGB6 313 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 OR13C3Q8NGS6 347 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 OR52N1Q8NH53 320 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 CLDND2Q8NHS1 167 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 TSEN15Q8WW01 171 aaKnown RBP6.3□□□□□ -1.4
NR1I3-231ENST00000512340 OR5P3Q8WZ94 311 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 C12orf43Q96C57 262 aaKnown RBP6.3□□□□□ -1.4
NR1I3-231ENST00000512340 PELI1Q96FA3 418 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 BORCS8Q96FH0 119 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 NEIL1Q96FI4 390 aaPredicted RBP6.3□□□□□ -1.4
NR1I3-231ENST00000512340 OPALINQ96PE5 141 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 SOX7Q9BT81 388 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 MND1Q9BWT6 205 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 ANKRD60Q9BZ19 345 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 SHARPINQ9H0F6 387 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 NARFLQ9H6Q4 476 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 PLGRKTQ9HBL7 147 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 PALMDQ9NP74 551 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 TMEM160Q9NX00 188 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 BABAM2Q9NXR7 383 aa6.3□□□□□ -1.4
NR1I3-231ENST00000512340 RASL12Q9NYN1 266 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms