RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 PLSCR3Q9NRY6 295 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 SEMA7AO75326 666 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 GPANK1O95872 356 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 SMIM17P0DL12 118 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 FAM53BQ14153 422 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 PRSS45Q7RTY3 260 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 ZNF816-ZNF321PA0A0X1KG74 233 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 TIMM8AO60220 97 aaPredicted RBP7.55□□□□□ -1.2
HTT-208ENST00000510626 WDR1O75083 606 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 ST3GAL2Q16842 350 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 SPANXN5Q5MJ07 72 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 ZNF761Q86XN6 746 aaPredicted RBP7.55□□□□□ -1.2
HTT-208ENST00000510626 DOLPP1Q86YN1 238 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 GPR61Q9BZJ8 451 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 MPGP29372 298 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 TMEM207Q6UWW9 146 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 ZNF813Q6ZN06 617 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 A0A1B0GX78 115 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 LRRC3CA6NJW4 275 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 DDTP30046 118 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 FAM209AQ5JX71 171 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 OR5AU1Q8NGC0 362 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 OR52N5Q8NH56 324 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 PTRH2Q9Y3E5 179 aaKnown RBP7.55□□□□□ -1.2
HTT-208ENST00000510626 A0A0B4J2E0 115 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 A0A1B0GX12 115 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 GEMIN2O14893 280 aaKnown RBP7.55□□□□□ -1.2
HTT-208ENST00000510626 FABP2P12104 132 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 GABRA1P14867 456 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 OR5M10Q6IEU7 315 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 TXNRD2Q9NNW7 524 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 ZIC2O95409 532 aaPredicted RBP7.55□□□□□ -1.2
HTT-208ENST00000510626 TBXA2RP21731 343 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 PPP1CAP62136 330 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 CALHM2Q9HA72 323 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 USP22Q9UPT9 525 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 ARFGEF3Q5TH69 2177 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 KIAA1324LA8MWY0 1029 aaPredicted RBP7.55□□□□□ -1.2
HTT-208ENST00000510626 PLPP1O14494 284 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 IFI6P09912 130 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 HAAOP46952 286 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 KIAA1456Q9P272 454 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 CARFQ8N187 725 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 MARCH1Q8TCQ1 289 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 C11orf40Q8WZ69 217 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 COMMD5Q9GZQ3 224 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 CA10Q9NS85 328 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 A0A0A6YYC8 382 aaPredicted RBP7.55□□□□□ -1.2
HTT-208ENST00000510626 I3L1I5 382 aaPredicted RBP7.55□□□□□ -1.2
HTT-208ENST00000510626 HSPB1P04792 205 aaKnown RBP7.55□□□□□ -1.2
HTT-208ENST00000510626 DECR2Q9NUI1 292 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 A0A1B0GU03 582 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 ARG2P78540 354 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 BLNKQ8WV28 456 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 ERGIC1Q969X5 290 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 ASB16Q96NS5 453 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 SIRPB1O00241 398 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 SLC10A3P09131 477 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 EPHA8P29322 1005 aaPredicted RBP7.54□□□□□ -1.2
HTT-208ENST00000510626 GPM6AP51674 278 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 PRSS36Q5K4E3 855 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 MEX3DQ86XN8 651 aaKnown RBP7.54□□□□□ -1.2
HTT-208ENST00000510626 OR5M1Q8NGP8 315 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 STARD4Q96DR4 205 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 OR8B4Q96RC9 309 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 STARD5Q9NSY2 213 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 M0R135 149 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 TNFSF12O43508 249 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 JAG1P78504 1218 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 SLC25A42Q86VD7 318 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 ZNF799Q96GE5 643 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 MAGT1Q9H0U3 335 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 SIGLEC5O15389 551 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 RTP2Q5QGT7 225 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 TRNP1Q6NT89 227 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 OR5A2Q8NGI9 324 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 RAB37Q96AX2 223 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 C19orf24Q9BVV8 132 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 ADAMTSL3P82987 1691 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 LOC390937A0A1W2PQ73 354 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 OR7C2O60412 319 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 FAM216AQ8WUB2 273 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.54□□□□□ -1.2
HTT-208ENST00000510626 MS4A6EQ96DS6 147 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 TIMD4Q96H15 378 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 ZMAT3Q9HA38 289 aaKnown RBP7.54□□□□□ -1.2
HTT-208ENST00000510626 SEBOXQ9HB31 216 aaPredicted RBP7.54□□□□□ -1.2
HTT-208ENST00000510626 M0R082 166 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 FGF2P09038 288 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 PGGT1BP53609 377 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 FAM26DQ5JW98 314 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 MORN1Q5T089 497 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 FBLIM1Q8WUP2 373 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 DERL3Q96Q80 235 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 IL23AQ9NPF7 189 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 A6NL46 340 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 CA11O75493 328 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 SHBQ15464 509 aa7.54□□□□□ -1.2
HTT-208ENST00000510626 PARS2Q7L3T8 475 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms