RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-223	ENST00000509900	RBP4	P02753	201 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	IL6	P05231	212 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	OR8U8	P0C7N1	319 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	PIP	P12273	146 aa	Predicted RBP	7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	ARSB	P15848	533 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	KRT4	P19013	534 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	TPTE	P56180	551 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	GABPB1	Q06547	395 aa	Predicted RBP	7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	FOXE3	Q13461	319 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	PNLIPRP3	Q17RR3	467 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	RFX4	Q33E94	735 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	SLC18B1	Q6NT16	456 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	TMEM65	Q6PI78	240 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	CEMP1	Q6PRD7	247 aa	Predicted RBP	7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	LINC00336	Q6ZUF6	198 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	MAVS	Q7Z434	540 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	CPLX4	Q7Z7G2	160 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	LINC00346	Q8IVM7	164 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	MICU2	Q8IYU8	434 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	CD177	Q8N6Q3	437 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	ZNF781	Q8N8C0	355 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	C5orf56	Q8N8D9	126 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	CYB561A3	Q8NBI2	242 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	TMEM239	Q8WW34	195 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	EME1	Q96AY2	570 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	ZNF799	Q96GE5	643 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	ZBTB18	Q99592	522 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	AHCYL1	O43865	530 aa		7.35	□□□□□ -1.23
PTPN20-223	ENST00000509900	IGHG2	P01859	326 aa		7.35	□□□□□ -1.23
PTPN20-223	ENST00000509900	ZNF728	P0DKX0	622 aa		7.35	□□□□□ -1.23
PTPN20-223	ENST00000509900	CD247	P20963	164 aa		7.35	□□□□□ -1.23
PTPN20-223	ENST00000509900	GLRA1	P23415	457 aa		7.35	□□□□□ -1.23
PTPN20-223	ENST00000509900	HTR1D	P28221	377 aa		7.35	□□□□□ -1.23
PTPN20-223	ENST00000509900	DCTD	P32321	178 aa		7.35	□□□□□ -1.23
PTPN20-223	ENST00000509900	GNAL	P38405	381 aa		7.35	□□□□□ -1.23
PTPN20-223	ENST00000509900	ZNF616	Q08AN1	781 aa		7.35	□□□□□ -1.23
PTPN20-223	ENST00000509900	GPR50	Q13585	617 aa		7.35	□□□□□ -1.23
PTPN20-223	ENST00000509900	AGBL2	Q5U5Z8	902 aa		7.35	□□□□□ -1.23
PTPN20-223	ENST00000509900	ACSM6	Q6P461	480 aa		7.35	□□□□□ -1.23
PTPN20-223	ENST00000509900	SLC35E3	Q7Z769	313 aa		7.35	□□□□□ -1.23
PTPN20-223	ENST00000509900	MSRB3	Q8IXL7	192 aa		7.35	□□□□□ -1.23
PTPN20-223	ENST00000509900	OR1N2	Q8NGR9	330 aa		7.35	□□□□□ -1.23
PTPN20-223	ENST00000509900	OR51A7	Q8NH64	312 aa		7.35	□□□□□ -1.23
PTPN20-223	ENST00000509900	GTF2H4	Q92759	462 aa		7.35	□□□□□ -1.23
PTPN20-223	ENST00000509900	FGF23	Q9GZV9	251 aa	Predicted RBP	7.35	□□□□□ -1.23
PTPN20-223	ENST00000509900	TMEM38A	Q9H6F2	299 aa		7.35	□□□□□ -1.23
PTPN20-223	ENST00000509900	WDR55	Q9H6Y2	383 aa	Predicted RBP	7.35	□□□□□ -1.23
PTPN20-223	ENST00000509900	PAPOLB	Q9NRJ5	636 aa	Known RBP	7.35	□□□□□ -1.23
PTPN20-223	ENST00000509900	SLC25A37	Q9NYZ2	338 aa		7.35	□□□□□ -1.23
PTPN20-223	ENST00000509900	ZIM2	Q9NZV7	527 aa		7.35	□□□□□ -1.23
PTPN20-223	ENST00000509900	DCTN6	O00399	190 aa		7.34	□□□□□ -1.23
PTPN20-223	ENST00000509900	XKRY	O14609	159 aa		7.34	□□□□□ -1.23
PTPN20-223	ENST00000509900	SLC22A2	O15244	555 aa		7.34	□□□□□ -1.23
PTPN20-223	ENST00000509900	HSPA12A	O43301	675 aa		7.34	□□□□□ -1.23
PTPN20-223	ENST00000509900	ELANE	P08246	267 aa		7.34	□□□□□ -1.23
PTPN20-223	ENST00000509900	PI3	P19957	117 aa		7.34	□□□□□ -1.23
PTPN20-223	ENST00000509900	DDOST	P39656	456 aa		7.34	□□□□□ -1.23
PTPN20-223	ENST00000509900	LINC00322	Q6ZN03	302 aa	Predicted RBP	7.34	□□□□□ -1.23
PTPN20-223	ENST00000509900	TCF23	Q7RTU1	214 aa		7.34	□□□□□ -1.23
PTPN20-223	ENST00000509900	FAM122B	Q7Z309	247 aa		7.34	□□□□□ -1.23
PTPN20-223	ENST00000509900	HAPLN4	Q86UW8	402 aa		7.34	□□□□□ -1.23
PTPN20-223	ENST00000509900	FOXRED2	Q8IWF2	684 aa		7.34	□□□□□ -1.23
PTPN20-223	ENST00000509900	OR6V1	Q8N148	313 aa		7.34	□□□□□ -1.23
PTPN20-223	ENST00000509900	IFT81	Q8WYA0	676 aa		7.34	□□□□□ -1.23
PTPN20-223	ENST00000509900	DLX4	Q92988	240 aa	Predicted RBP	7.34	□□□□□ -1.23
PTPN20-223	ENST00000509900	SPSB4	Q96A44	273 aa		7.34	□□□□□ -1.23
PTPN20-223	ENST00000509900	NUAK2	Q9H093	628 aa		7.34	□□□□□ -1.23
PTPN20-223	ENST00000509900	C1orf21	Q9H246	121 aa		7.34	□□□□□ -1.23
PTPN20-223	ENST00000509900	DPM3	Q9P2X0	92 aa		7.34	□□□□□ -1.23
PTPN20-223	ENST00000509900	GRHPR	Q9UBQ7	328 aa		7.34	□□□□□ -1.23
PTPN20-223	ENST00000509900	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	7.34	□□□□□ -1.23
PTPN20-223	ENST00000509900	MED31	Q9Y3C7	131 aa		7.34	□□□□□ -1.23
PTPN20-223	ENST00000509900	RFPL4A	A6NLU0	287 aa		7.33	□□□□□ -1.24
PTPN20-223	ENST00000509900	RFPL4AL1	F8VTS6	287 aa		7.33	□□□□□ -1.24
PTPN20-223	ENST00000509900		I3L521	148 aa		7.33	□□□□□ -1.24
PTPN20-223	ENST00000509900	TYROBP	O43914	113 aa		7.33	□□□□□ -1.24
PTPN20-223	ENST00000509900	MTRF1	O75570	445 aa	Known RBP	7.33	□□□□□ -1.24
PTPN20-223	ENST00000509900	OTX1	P32242	354 aa	Predicted RBP	7.33	□□□□□ -1.24
PTPN20-223	ENST00000509900	GNB1	P62873	340 aa		7.33	□□□□□ -1.24
PTPN20-223	ENST00000509900	FAM3A	P98173	230 aa		7.33	□□□□□ -1.24
PTPN20-223	ENST00000509900	FAM76B	Q5HYJ3	339 aa		7.33	□□□□□ -1.24
PTPN20-223	ENST00000509900	GPR139	Q6DWJ6	353 aa		7.33	□□□□□ -1.24
PTPN20-223	ENST00000509900	FAM53A	Q6NSI3	398 aa	Predicted RBP	7.33	□□□□□ -1.24
PTPN20-223	ENST00000509900	PGM2L1	Q6PCE3	622 aa		7.33	□□□□□ -1.24
PTPN20-223	ENST00000509900	SMARCD3	Q6STE5	483 aa		7.33	□□□□□ -1.24
PTPN20-223	ENST00000509900	MSANTD1	Q6ZTZ1	278 aa		7.33	□□□□□ -1.24
PTPN20-223	ENST00000509900	SLC16A9	Q7RTY1	509 aa		7.33	□□□□□ -1.24
PTPN20-223	ENST00000509900	CATSPERD	Q86XM0	798 aa		7.33	□□□□□ -1.24
PTPN20-223	ENST00000509900	ZNF561	Q8N587	486 aa		7.33	□□□□□ -1.24
PTPN20-223	ENST00000509900	MAPKAPK5-AS1	Q8N8E1	139 aa		7.33	□□□□□ -1.24
PTPN20-223	ENST00000509900	MYOZ3	Q8TDC0	251 aa		7.33	□□□□□ -1.24
PTPN20-223	ENST00000509900	BPIFA2	Q96DR5	249 aa		7.33	□□□□□ -1.24
PTPN20-223	ENST00000509900	ZNF570	Q96NI8	536 aa		7.33	□□□□□ -1.24
PTPN20-223	ENST00000509900	TSSK2	Q96PF2	358 aa		7.33	□□□□□ -1.24
PTPN20-223	ENST00000509900	PAPOLG	Q9BWT3	736 aa	Known RBP	7.33	□□□□□ -1.24
PTPN20-223	ENST00000509900	CLEC7A	Q9BXN2	247 aa		7.33	□□□□□ -1.24
PTPN20-223	ENST00000509900	C20orf27	Q9GZN8	174 aa		7.33	□□□□□ -1.24
PTPN20-223	ENST00000509900	IKZF5	Q9H5V7	419 aa		7.33	□□□□□ -1.24
PTPN20-223	ENST00000509900	OPA3	Q9H6K4	179 aa		7.33	□□□□□ -1.24
PTPN20-223	ENST00000509900	TUBA4B	Q9H853	241 aa		7.33	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms