RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 GTF2A1LQ9UNN4 478 aa12.62□□□□□ -0.39
TPM3-219ENST00000509409 A0A0U1RQV5 110 aa12.61□□□□□ -0.39
TPM3-219ENST00000509409 ANKRD61A6NGH8 418 aa12.61□□□□□ -0.39
TPM3-219ENST00000509409 H0YAE9 185 aa12.61□□□□□ -0.39
TPM3-219ENST00000509409 FKBP6O75344 327 aa12.61□□□□□ -0.39
TPM3-219ENST00000509409 PSG2P11465 335 aa12.61□□□□□ -0.39
TPM3-219ENST00000509409 ATP6V1B1P15313 513 aa12.61□□□□□ -0.39
TPM3-219ENST00000509409 SLC2A5P22732 501 aa12.61□□□□□ -0.39
TPM3-219ENST00000509409 DCTDP32321 178 aa12.61□□□□□ -0.39
TPM3-219ENST00000509409 UBE2E1P51965 193 aa12.61□□□□□ -0.39
TPM3-219ENST00000509409 RIDAP52758 137 aaKnown RBP12.61□□□□□ -0.39
TPM3-219ENST00000509409 CRISP1P54107 249 aa12.61□□□□□ -0.39
TPM3-219ENST00000509409 CAV3P56539 151 aa12.61□□□□□ -0.39
TPM3-219ENST00000509409 PLCXD3Q63HM9 321 aa12.61□□□□□ -0.39
TPM3-219ENST00000509409 Q6ZSV7 163 aa12.61□□□□□ -0.39
TPM3-219ENST00000509409 FAM185AQ8N0U4 392 aa12.61□□□□□ -0.39
TPM3-219ENST00000509409 ZNRF1Q8ND25 227 aa12.61□□□□□ -0.39
TPM3-219ENST00000509409 ASB17Q8WXJ9 295 aa12.61□□□□□ -0.39
TPM3-219ENST00000509409 TTTY10Q9BZA0 68 aa12.61□□□□□ -0.39
TPM3-219ENST00000509409 METTL8Q9H825 291 aaKnown RBP12.61□□□□□ -0.39
TPM3-219ENST00000509409 ELL3Q9HB65 397 aaPredicted RBP12.61□□□□□ -0.39
TPM3-219ENST00000509409 GPR84Q9NQS5 396 aa12.61□□□□□ -0.39
TPM3-219ENST00000509409 PAPOLBQ9NRJ5 636 aaKnown RBP12.61□□□□□ -0.39
TPM3-219ENST00000509409 FAM206AQ9NX38 181 aa12.61□□□□□ -0.39
TPM3-219ENST00000509409 H2AFY2Q9P0M6 372 aaPredicted RBP12.61□□□□□ -0.39
TPM3-219ENST00000509409 VPREB3Q9UKI3 123 aa12.61□□□□□ -0.39
TPM3-219ENST00000509409 PIGLQ9Y2B2 252 aa12.61□□□□□ -0.39
TPM3-219ENST00000509409 SF3B6Q9Y3B4 125 aaKnown RBP12.61□□□□□ -0.39
TPM3-219ENST00000509409 TMEM14AQ9Y6G1 99 aa12.61□□□□□ -0.39
TPM3-219ENST00000509409 ZNF254O75437 659 aa12.6□□□□□ -0.39
TPM3-219ENST00000509409 CLPXO76031 633 aa12.6□□□□□ -0.39
TPM3-219ENST00000509409 SAA4P35542 130 aa12.6□□□□□ -0.39
TPM3-219ENST00000509409 PROK1P58294 105 aa12.6□□□□□ -0.39
TPM3-219ENST00000509409 ZNF829Q3KNS6 432 aaPredicted RBP12.6□□□□□ -0.39
TPM3-219ENST00000509409 DNAL1Q4LDG9 190 aa12.6□□□□□ -0.39
TPM3-219ENST00000509409 ASPHD2Q6ICH7 369 aa12.6□□□□□ -0.39
TPM3-219ENST00000509409 HAGHLQ6PII5 290 aaPredicted RBP12.6□□□□□ -0.39
TPM3-219ENST00000509409 ZNF679Q8IYX0 411 aa12.6□□□□□ -0.39
TPM3-219ENST00000509409 OR5R1Q8NH85 324 aa12.6□□□□□ -0.39
TPM3-219ENST00000509409 AQP3Q92482 292 aa12.6□□□□□ -0.39
TPM3-219ENST00000509409 TNFRSF14Q92956 283 aa12.6□□□□□ -0.39
TPM3-219ENST00000509409 ITFG2Q969R8 447 aa12.6□□□□□ -0.39
TPM3-219ENST00000509409 PPP1R14AQ96A00 147 aa12.6□□□□□ -0.39
TPM3-219ENST00000509409 RBM4BQ9BQ04 359 aaKnown RBP12.6□□□□□ -0.39
TPM3-219ENST00000509409 MMP27Q9H306 513 aa12.6□□□□□ -0.39
TPM3-219ENST00000509409 RASL12Q9NYN1 266 aa12.6□□□□□ -0.39
TPM3-219ENST00000509409 ENPP5Q9UJA9 477 aa12.6□□□□□ -0.39
TPM3-219ENST00000509409 IGKV1D-17A0A075B6S4 117 aa12.59□□□□□ -0.39
TPM3-219ENST00000509409 CCDC182A6NF36 153 aa12.59□□□□□ -0.39
TPM3-219ENST00000509409 OR5B21A6NL26 309 aa12.59□□□□□ -0.39
TPM3-219ENST00000509409 ANGPTL7O43827 346 aa12.59□□□□□ -0.39
TPM3-219ENST00000509409 MTRF1O75570 445 aaKnown RBP12.59□□□□□ -0.39
TPM3-219ENST00000509409 NRASP01111 189 aa12.59□□□□□ -0.39
TPM3-219ENST00000509409 FAHP16930 419 aa12.59□□□□□ -0.39
TPM3-219ENST00000509409 TGFBR2P37173 567 aa12.59□□□□□ -0.39
TPM3-219ENST00000509409 ACTR3P61158 418 aa12.59□□□□□ -0.39
TPM3-219ENST00000509409 ESRRGP62508 458 aa12.59□□□□□ -0.39
TPM3-219ENST00000509409 ACSM1Q08AH1 577 aa12.59□□□□□ -0.39
TPM3-219ENST00000509409 OCLNQ16625 522 aa12.59□□□□□ -0.39
TPM3-219ENST00000509409 ZNF684Q5T5D7 378 aa12.59□□□□□ -0.39
TPM3-219ENST00000509409 TRPM8Q7Z2W7 1104 aa12.59□□□□□ -0.39
TPM3-219ENST00000509409 OR5D13Q8NGL4 314 aa12.59□□□□□ -0.39
TPM3-219ENST00000509409 DNAJC9Q8WXX5 260 aa12.59□□□□□ -0.39
TPM3-219ENST00000509409 OR8B4Q96RC9 309 aa12.59□□□□□ -0.39
TPM3-219ENST00000509409 PPA2Q9H2U2 334 aa12.59□□□□□ -0.39
TPM3-219ENST00000509409 C16orf95Q9H693 158 aa12.59□□□□□ -0.39
TPM3-219ENST00000509409 COPS3Q9UNS2 423 aa12.59□□□□□ -0.39
TPM3-219ENST00000509409 MAB21L2Q9Y586 359 aa12.59□□□□□ -0.39
TPM3-219ENST00000509409 TRBV23-1A0A0A0MS06 115 aa12.58□□□□□ -0.4
TPM3-219ENST00000509409 TCRBV3S1A0A5B6 114 aa12.58□□□□□ -0.4
TPM3-219ENST00000509409 RFPL4AA6NLU0 287 aa12.58□□□□□ -0.4
TPM3-219ENST00000509409 RFPL4AL1F8VTS6 287 aa12.58□□□□□ -0.4
TPM3-219ENST00000509409 DAPP51397 102 aa12.58□□□□□ -0.4
TPM3-219ENST00000509409 PTGES3Q15185 160 aaKnown RBP12.58□□□□□ -0.4
TPM3-219ENST00000509409 ZBTB37Q5TC79 503 aa12.58□□□□□ -0.4
TPM3-219ENST00000509409 MEPCEQ7L2J0 689 aaKnown RBP12.58□□□□□ -0.4
TPM3-219ENST00000509409 KRT74Q7RTS7 529 aa12.58□□□□□ -0.4
TPM3-219ENST00000509409 OR51G2Q8NGK0 314 aa12.58□□□□□ -0.4
TPM3-219ENST00000509409 NRBF2Q96F24 287 aa12.58□□□□□ -0.4
TPM3-219ENST00000509409 ZNF488Q96MN9 340 aa12.58□□□□□ -0.4
TPM3-219ENST00000509409 CNN2Q99439 309 aaKnown RBP12.58□□□□□ -0.4
TPM3-219ENST00000509409 APOL4Q9BPW4 351 aa12.58□□□□□ -0.4
TPM3-219ENST00000509409 PRRG3Q9BZD7 231 aa12.58□□□□□ -0.4
TPM3-219ENST00000509409 FAM234AQ9H0X4 552 aa12.58□□□□□ -0.4
TPM3-219ENST00000509409 A0A1W2PPH5 198 aa12.57□□□□□ -0.4
TPM3-219ENST00000509409 LOC110117498-PIK3R3F6TDL0 507 aa12.57□□□□□ -0.4
TPM3-219ENST00000509409 H3BUX3 64 aa12.57□□□□□ -0.4
TPM3-219ENST00000509409 SLC1A7O00341 560 aa12.57□□□□□ -0.4
TPM3-219ENST00000509409 PRKYO43930 277 aa12.57□□□□□ -0.4
TPM3-219ENST00000509409 DHRS3O75911 302 aa12.57□□□□□ -0.4
TPM3-219ENST00000509409 TSPAN9O75954 239 aa12.57□□□□□ -0.4
TPM3-219ENST00000509409 PRDX2P32119 198 aa12.57□□□□□ -0.4
TPM3-219ENST00000509409 HAAOP46952 286 aa12.57□□□□□ -0.4
TPM3-219ENST00000509409 CXCR4P61073 352 aa12.57□□□□□ -0.4
TPM3-219ENST00000509409 ROM1Q03395 351 aa12.57□□□□□ -0.4
TPM3-219ENST00000509409 LY6EQ16553 131 aa12.57□□□□□ -0.4
TPM3-219ENST00000509409 SMIM21Q3B7S5 101 aa12.57□□□□□ -0.4
TPM3-219ENST00000509409 CLVS2Q5SYC1 327 aa12.57□□□□□ -0.4
TPM3-219ENST00000509409 SLC35E4Q6ICL7 350 aa12.57□□□□□ -0.4
TPM3-219ENST00000509409 ZNF322Q6U7Q0 402 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms