RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 WDR13Q9H1Z4 485 aa15.44■□□□□ 0.06
UBE3D-207ENST00000509102 RASL12Q9NYN1 266 aa15.44■□□□□ 0.06
UBE3D-207ENST00000509102 USE1Q9NZ43 259 aa15.44■□□□□ 0.06
UBE3D-207ENST00000509102 ONECUT1Q9UBC0 465 aa15.44■□□□□ 0.06
UBE3D-207ENST00000509102 POLDIP2Q9Y2S7 368 aa15.44■□□□□ 0.06
UBE3D-207ENST00000509102 KPTNQ9Y664 436 aa15.44■□□□□ 0.06
UBE3D-207ENST00000509102 OR2AT4A6NND4 320 aa15.43■□□□□ 0.06
UBE3D-207ENST00000509102 CLDN34H7C241 214 aa15.43■□□□□ 0.06
UBE3D-207ENST00000509102 APOL3O95236 402 aa15.43■□□□□ 0.06
UBE3D-207ENST00000509102 GABRA2P47869 451 aa15.43■□□□□ 0.06
UBE3D-207ENST00000509102 ACTC1P68032 377 aa15.43■□□□□ 0.06
UBE3D-207ENST00000509102 ACTA1P68133 377 aa15.43■□□□□ 0.06
UBE3D-207ENST00000509102 TUSC1Q2TAM9 212 aa15.43■□□□□ 0.06
UBE3D-207ENST00000509102 MEDAGQ5VYS4 303 aa15.43■□□□□ 0.06
UBE3D-207ENST00000509102 PPP1R14AQ96A00 147 aa15.43■□□□□ 0.06
UBE3D-207ENST00000509102 SEH1LQ96EE3 360 aa15.43■□□□□ 0.06
UBE3D-207ENST00000509102 HRASLS5Q96KN8 279 aa15.43■□□□□ 0.06
UBE3D-207ENST00000509102 ZNF48Q96MX3 618 aaPredicted RBP15.43■□□□□ 0.06
UBE3D-207ENST00000509102 MYCBPQ99417 103 aaPredicted RBP15.43■□□□□ 0.06
UBE3D-207ENST00000509102 NOX4Q9NPH5 578 aa15.43■□□□□ 0.06
UBE3D-207ENST00000509102 SLC25A10Q9UBX3 287 aaPredicted RBP15.43■□□□□ 0.06
UBE3D-207ENST00000509102 V9GYS6 101 aa15.43■□□□□ 0.06
UBE3D-207ENST00000509102 SYT7O43581 403 aa15.42■□□□□ 0.06
UBE3D-207ENST00000509102 RHBDL1O75783 438 aa15.42■□□□□ 0.06
UBE3D-207ENST00000509102 RNASE1P07998 156 aaKnown RBP15.42■□□□□ 0.06
UBE3D-207ENST00000509102 MMP9P14780 707 aa15.42■□□□□ 0.06
UBE3D-207ENST00000509102 HAAOP46952 286 aa15.42■□□□□ 0.06
UBE3D-207ENST00000509102 TGM4P49221 684 aa15.42■□□□□ 0.06
UBE3D-207ENST00000509102 SMIM21Q3B7S5 101 aa15.42■□□□□ 0.06
UBE3D-207ENST00000509102 ZNF788Q6ZQV5 615 aa15.42■□□□□ 0.06
UBE3D-207ENST00000509102 SSX6Q7RTT6 188 aa15.42■□□□□ 0.06
UBE3D-207ENST00000509102 ANGPTL6Q8NI99 470 aa15.42■□□□□ 0.06
UBE3D-207ENST00000509102 AQP3Q92482 292 aa15.42■□□□□ 0.06
UBE3D-207ENST00000509102 LHX4Q969G2 390 aa15.42■□□□□ 0.06
UBE3D-207ENST00000509102 MRPL48Q96GC5 212 aaKnown RBP15.42■□□□□ 0.06
UBE3D-207ENST00000509102 TBX15Q96SF7 602 aa15.42■□□□□ 0.06
UBE3D-207ENST00000509102 C9orf16Q9BUW7 83 aa15.42■□□□□ 0.06
UBE3D-207ENST00000509102 FGF23Q9GZV9 251 aaPredicted RBP15.42■□□□□ 0.06
UBE3D-207ENST00000509102 SIRPDQ9H106 197 aa15.42■□□□□ 0.06
UBE3D-207ENST00000509102 GPR173Q9NS66 373 aa15.42■□□□□ 0.06
UBE3D-207ENST00000509102 GNG8Q9UK08 70 aa15.42■□□□□ 0.06
UBE3D-207ENST00000509102 SLC7A11Q9UPY5 501 aa15.42■□□□□ 0.06
UBE3D-207ENST00000509102 IGHV1-69DA0A0B4J2H0 117 aa15.41■□□□□ 0.06
UBE3D-207ENST00000509102 A0A1B0GW55 424 aa15.41■□□□□ 0.06
UBE3D-207ENST00000509102 A0A1W2PQ09 198 aa15.41■□□□□ 0.06
UBE3D-207ENST00000509102 H3BNX3 289 aa15.41■□□□□ 0.06
UBE3D-207ENST00000509102 J3QT63 122 aa15.41■□□□□ 0.06
UBE3D-207ENST00000509102 SIGLEC5O15389 551 aa15.41■□□□□ 0.06
UBE3D-207ENST00000509102 SERPINA3P01011 423 aa15.41■□□□□ 0.06
UBE3D-207ENST00000509102 IGHV1-69P01742 117 aa15.41■□□□□ 0.06
UBE3D-207ENST00000509102 ACAA1P09110 424 aaPredicted RBP15.41■□□□□ 0.06
UBE3D-207ENST00000509102 DUX4L2P0CJ85 424 aa15.41■□□□□ 0.06
UBE3D-207ENST00000509102 DUX4L3P0CJ86 424 aa15.41■□□□□ 0.06
UBE3D-207ENST00000509102 DUX4L4P0CJ87 422 aa15.41■□□□□ 0.06
UBE3D-207ENST00000509102 DUX4L5P0CJ88 424 aa15.41■□□□□ 0.06
UBE3D-207ENST00000509102 DUX4L6P0CJ89 424 aa15.41■□□□□ 0.06
UBE3D-207ENST00000509102 DUX4L7P0CJ90 424 aa15.41■□□□□ 0.06
UBE3D-207ENST00000509102 HKR1P10072 659 aa15.41■□□□□ 0.06
UBE3D-207ENST00000509102 NDUFB7P17568 137 aa15.41■□□□□ 0.06
UBE3D-207ENST00000509102 CFPP27918 469 aa15.41■□□□□ 0.06
UBE3D-207ENST00000509102 BLMHQ13867 455 aa15.41■□□□□ 0.06
UBE3D-207ENST00000509102 SLC9A3R2Q15599 337 aa15.41■□□□□ 0.06
UBE3D-207ENST00000509102 ODF4Q2M2E3 257 aa15.41■□□□□ 0.06
UBE3D-207ENST00000509102 DEFB112Q30KQ8 113 aa15.41■□□□□ 0.06
UBE3D-207ENST00000509102 ZIK1Q3SY52 487 aaPredicted RBP15.41■□□□□ 0.06
UBE3D-207ENST00000509102 DUX4L9Q6RFH8 374 aaPredicted RBP15.41■□□□□ 0.06
UBE3D-207ENST00000509102 CATSPERDQ86XM0 798 aa15.41■□□□□ 0.06
UBE3D-207ENST00000509102 CBR4Q8N4T8 237 aa15.41■□□□□ 0.06
UBE3D-207ENST00000509102 KIR3DL3Q8N743 410 aa15.41■□□□□ 0.06
UBE3D-207ENST00000509102 OR14K1Q8NGZ2 314 aa15.41■□□□□ 0.06
UBE3D-207ENST00000509102 DCTN5Q9BTE1 182 aa15.41■□□□□ 0.06
UBE3D-207ENST00000509102 ACOXLQ9NUZ1 547 aa15.41■□□□□ 0.06
UBE3D-207ENST00000509102 DUX4Q9UBX2 424 aa15.41■□□□□ 0.06
UBE3D-207ENST00000509102 SLC22A13Q9Y226 551 aa15.41■□□□□ 0.06
UBE3D-207ENST00000509102 CAB39Q9Y376 341 aaPredicted RBP15.41■□□□□ 0.06
UBE3D-207ENST00000509102 PCDHGB1Q9Y5G3 927 aa15.41■□□□□ 0.06
UBE3D-207ENST00000509102 CENPVL3A0A0U1RRI6 287 aa15.4■□□□□ 0.06
UBE3D-207ENST00000509102 A0A1B0GTI1 187 aa15.4■□□□□ 0.06
UBE3D-207ENST00000509102 ANKRD61A6NGH8 418 aa15.4■□□□□ 0.06
UBE3D-207ENST00000509102 GATBO75879 557 aaKnown RBP15.4■□□□□ 0.06
UBE3D-207ENST00000509102 UBCP0CG48 685 aaKnown RBP15.4■□□□□ 0.06
UBE3D-207ENST00000509102 CCL1P22362 96 aa15.4■□□□□ 0.06
UBE3D-207ENST00000509102 CAPZA1P52907 286 aa15.4■□□□□ 0.06
UBE3D-207ENST00000509102 CAV3P56539 151 aa15.4■□□□□ 0.06
UBE3D-207ENST00000509102 SNRPGP62308 76 aaKnown RBP15.4■□□□□ 0.06
UBE3D-207ENST00000509102 ELF3P78545 371 aaPredicted RBP15.4■□□□□ 0.06
UBE3D-207ENST00000509102 DMRTC1Q5HYR2 192 aa15.4■□□□□ 0.06
UBE3D-207ENST00000509102 SLC25A30Q5SVS4 291 aa15.4■□□□□ 0.06
UBE3D-207ENST00000509102 TMEM42Q69YG0 159 aa15.4■□□□□ 0.06
UBE3D-207ENST00000509102 VMO1Q7Z5L0 202 aa15.4■□□□□ 0.06
UBE3D-207ENST00000509102 KCTD20Q7Z5Y7 419 aa15.4■□□□□ 0.06
UBE3D-207ENST00000509102 POC1AQ8NBT0 407 aa15.4■□□□□ 0.06
UBE3D-207ENST00000509102 LY6G5BQ8NDX9 201 aa15.4■□□□□ 0.06
UBE3D-207ENST00000509102 TMEM185AQ8NFB2 350 aa15.4■□□□□ 0.06
UBE3D-207ENST00000509102 RNFT2Q96EX2 444 aa15.4■□□□□ 0.06
UBE3D-207ENST00000509102 GAFA1Q96PS6 74 aa15.4■□□□□ 0.06
UBE3D-207ENST00000509102 GMPPBQ9Y5P6 360 aa15.4■□□□□ 0.06
UBE3D-207ENST00000509102 DAPL1A0PJW8 107 aa15.39■□□□□ 0.05
UBE3D-207ENST00000509102 SLC1A7O00341 560 aa15.39■□□□□ 0.05
UBE3D-207ENST00000509102 HOXA3O43365 443 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms