RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 BAP18Q8IXM2 172 aa9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 GVQW1Q8N7I0 195 aa9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 OR13C9Q8NGT0 318 aa9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 NUDCD2Q8WVJ2 157 aa9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 ARL11Q969Q4 196 aa9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 ZNF775Q96BV0 537 aaPredicted RBP9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 NKX3-1Q99801 234 aaPredicted RBP9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 FAM117AQ9C073 453 aa9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 MS4A7Q9GZW8 240 aaPredicted RBP9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 LPAR5Q9H1C0 372 aa9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 MBD2Q9UBB5 411 aa9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 PHF3Q92576 2039 aaKnown RBP9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 NCOR2Q9Y618 2525 aa9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 TMEM218A2RU14 115 aa9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 EEF1E1-BLOC1S5C9J1V9 151 aa9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 CCSO14618 274 aa9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 SMAD9O15198 467 aaKnown RBP9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 TLX3O43711 291 aaPredicted RBP9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 SSX5O60225 188 aa9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 EIF1BO60739 113 aaKnown RBP9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 CA11O75493 328 aa9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 CD79AP11912 226 aa9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 FPR2P25090 351 aa9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 SERPINF1P36955 418 aa9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 TAS2R46P59540 309 aa9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 GRB2P62993 217 aaKnown RBP9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 CSNK2A1P68400 391 aaPredicted RBP9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 GABREP78334 506 aa9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 STK11Q15831 433 aa9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 PHYHD1Q5SRE7 291 aa9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 ABHD17BQ5VST6 288 aa9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 OR52W1Q6IF63 320 aa9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 GLIPR1L1Q6UWM5 242 aa9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 DRAM2Q6UX65 266 aa9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 IQCF2Q8IXL9 164 aa9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 PNLDC1Q8NA58 520 aaKnown RBP9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 CASTOR1Q8WTX7 329 aa9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 ZNF75AQ96N20 296 aa9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 PLA2G3Q9NZ20 509 aa9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 ASH2LQ9UBL3 628 aa9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 DNAJB11Q9UBS4 358 aa9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 PURGQ9UJV8 347 aaKnown RBP9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 POLR1DQ9Y2S0 133 aa9.66□□□□□ -0.86
SH3RF1-203ENST00000508685 AKAP13Q12802 2813 aa9.65□□□□□ -0.86
SH3RF1-203ENST00000508685 FIGNL2A6NMB9 653 aa9.65□□□□□ -0.86
SH3RF1-203ENST00000508685 NPIPA2E9PIF3 369 aa9.65□□□□□ -0.86
SH3RF1-203ENST00000508685 NPIPA3F8WFD2 350 aa9.65□□□□□ -0.86
SH3RF1-203ENST00000508685 TAAR5O14804 337 aa9.65□□□□□ -0.86
SH3RF1-203ENST00000508685 CDC14BO60729 498 aa9.65□□□□□ -0.86
SH3RF1-203ENST00000508685 PMP2P02689 132 aa9.65□□□□□ -0.86
SH3RF1-203ENST00000508685 H2AFB1P0C5Y9 115 aa9.65□□□□□ -0.86
SH3RF1-203ENST00000508685 CTSSP25774 331 aa9.65□□□□□ -0.86
SH3RF1-203ENST00000508685 ALDH3B1P43353 468 aa9.65□□□□□ -0.86
SH3RF1-203ENST00000508685 SUCLG1P53597 346 aaKnown RBP9.65□□□□□ -0.86
SH3RF1-203ENST00000508685 AIMP2Q13155 320 aaKnown RBP9.65□□□□□ -0.86
SH3RF1-203ENST00000508685 FAM74A1Q5RGS3 127 aa9.65□□□□□ -0.86
SH3RF1-203ENST00000508685 PRSS54Q6PEW0 395 aa9.65□□□□□ -0.86
SH3RF1-203ENST00000508685 SLC25A47Q6Q0C1 308 aa9.65□□□□□ -0.86
SH3RF1-203ENST00000508685 IL34Q6ZMJ4 242 aa9.65□□□□□ -0.86
SH3RF1-203ENST00000508685 PEG10Q86TG7 708 aaKnown RBP9.65□□□□□ -0.86
SH3RF1-203ENST00000508685 ADAD2Q8NCV1 583 aaKnown RBP9.65□□□□□ -0.86
SH3RF1-203ENST00000508685 OR9K2Q8NGE7 335 aa9.65□□□□□ -0.86
SH3RF1-203ENST00000508685 OR5H2Q8NGV7 314 aa9.65□□□□□ -0.86
SH3RF1-203ENST00000508685 MARCH1Q8TCQ1 289 aa9.65□□□□□ -0.86
SH3RF1-203ENST00000508685 DCUN1D4Q92564 292 aa9.65□□□□□ -0.86
SH3RF1-203ENST00000508685 CMBLQ96DG6 245 aa9.65□□□□□ -0.86
SH3RF1-203ENST00000508685 TMEM59Q9BXS4 323 aa9.65□□□□□ -0.86
SH3RF1-203ENST00000508685 NDRG3Q9UGV2 375 aa9.65□□□□□ -0.86
SH3RF1-203ENST00000508685 PCDHB10Q9UN67 800 aa9.65□□□□□ -0.86
SH3RF1-203ENST00000508685 MEMO1Q9Y316 297 aa9.65□□□□□ -0.86
SH3RF1-203ENST00000508685 CSAG2Q9Y5P2 127 aa9.65□□□□□ -0.86
SH3RF1-203ENST00000508685 LOC100509620A0A075B734 347 aa9.65□□□□□ -0.87
SH3RF1-203ENST00000508685 C13orf42A0A1B0GVH6 325 aa9.65□□□□□ -0.87
SH3RF1-203ENST00000508685 RER1O15258 196 aa9.65□□□□□ -0.87
SH3RF1-203ENST00000508685 CELA3AP09093 270 aa9.65□□□□□ -0.87
SH3RF1-203ENST00000508685 PGAM2P15259 253 aa9.65□□□□□ -0.87
SH3RF1-203ENST00000508685 SLC6A9P48067 706 aa9.65□□□□□ -0.87
SH3RF1-203ENST00000508685 CLDN15P56746 228 aa9.65□□□□□ -0.87
SH3RF1-203ENST00000508685 ATXN7L3Q14CW9 347 aaPredicted RBP9.65□□□□□ -0.87
SH3RF1-203ENST00000508685 FAM89BQ8N5H3 189 aa9.65□□□□□ -0.87
SH3RF1-203ENST00000508685 ZIC4Q8N9L1 334 aa9.65□□□□□ -0.87
SH3RF1-203ENST00000508685 OR10Z1Q8NGY1 313 aa9.65□□□□□ -0.87
SH3RF1-203ENST00000508685 OR51E1Q8TCB6 317 aa9.65□□□□□ -0.87
SH3RF1-203ENST00000508685 SAT2Q96F10 170 aaPredicted RBP9.65□□□□□ -0.87
SH3RF1-203ENST00000508685 NARS2Q96I59 477 aaKnown RBP9.65□□□□□ -0.87
SH3RF1-203ENST00000508685 TSNAXQ99598 290 aaKnown RBP9.65□□□□□ -0.87
SH3RF1-203ENST00000508685 KIAA1549Q9HCM3 1950 aa9.64□□□□□ -0.87
SH3RF1-203ENST00000508685 GJE1A6NN92 205 aa9.64□□□□□ -0.87
SH3RF1-203ENST00000508685 VAMP5O95183 116 aa9.64□□□□□ -0.87
SH3RF1-203ENST00000508685 MPIG6BO95866 241 aa9.64□□□□□ -0.87
SH3RF1-203ENST00000508685 APOC1P02654 83 aa9.64□□□□□ -0.87
SH3RF1-203ENST00000508685 LIPCP11150 499 aa9.64□□□□□ -0.87
SH3RF1-203ENST00000508685 ANOS1P23352 680 aa9.64□□□□□ -0.87
SH3RF1-203ENST00000508685 GUCA1AP43080 201 aaPredicted RBP9.64□□□□□ -0.87
SH3RF1-203ENST00000508685 CSNK1A1P48729 337 aa9.64□□□□□ -0.87
SH3RF1-203ENST00000508685 RAC3P60763 192 aa9.64□□□□□ -0.87
SH3RF1-203ENST00000508685 ECH1Q13011 328 aa9.64□□□□□ -0.87
SH3RF1-203ENST00000508685 OR1C1Q15619 314 aa9.64□□□□□ -0.87
SH3RF1-203ENST00000508685 SGCAQ16586 387 aa9.64□□□□□ -0.87
SH3RF1-203ENST00000508685 MICBQ29980 383 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms