RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 PANX1Q96RD7 426 aa0.85□□□□□ -2.27
GYPB-209ENST00000508618 NAPGQ99747 312 aaPredicted RBP0.85□□□□□ -2.27
GYPB-209ENST00000508618 C11orf70Q9BRQ4 267 aa0.85□□□□□ -2.27
GYPB-209ENST00000508618 UQCC2Q9BRT2 126 aa0.85□□□□□ -2.27
GYPB-209ENST00000508618 ZC4H2Q9NQZ6 224 aa0.85□□□□□ -2.27
GYPB-209ENST00000508618 BAHCC1Q9P281 2608 aa0.85□□□□□ -2.27
GYPB-209ENST00000508618 CES1P1Q9UKY3 287 aa0.85□□□□□ -2.27
GYPB-209ENST00000508618 TRAPPC1Q9Y5R8 145 aa0.85□□□□□ -2.27
GYPB-209ENST00000508618 PRR14LQ5THK1 2151 aa0.84□□□□□ -2.27
GYPB-209ENST00000508618 COL5A3P25940 1745 aaPredicted RBP0.84□□□□□ -2.27
GYPB-209ENST00000508618 IGLV10-54A0A075B6I4 117 aa0.84□□□□□ -2.27
GYPB-209ENST00000508618 LOC102724200A0A096LPH7 203 aaPredicted RBP0.84□□□□□ -2.27
GYPB-209ENST00000508618 LRRIQ4A6NIV6 560 aa0.84□□□□□ -2.27
GYPB-209ENST00000508618 IGLL5B9A064 214 aa0.84□□□□□ -2.27
GYPB-209ENST00000508618 H3BQ85 93 aa0.84□□□□□ -2.27
GYPB-209ENST00000508618 ZNF701M0R085 212 aaPredicted RBP0.84□□□□□ -2.27
GYPB-209ENST00000508618 AQP9O43315 295 aa0.84□□□□□ -2.27
GYPB-209ENST00000508618 FARS2O95363 451 aaKnown RBP0.84□□□□□ -2.27
GYPB-209ENST00000508618 OXTP01178 125 aa0.84□□□□□ -2.27
GYPB-209ENST00000508618 GABRG2P18507 467 aa0.84□□□□□ -2.27
GYPB-209ENST00000508618 NBL1P41271 181 aa0.84□□□□□ -2.27
GYPB-209ENST00000508618 HTR2BP41595 481 aa0.84□□□□□ -2.27
GYPB-209ENST00000508618 MAGEA1P43355 309 aa0.84□□□□□ -2.27
GYPB-209ENST00000508618 CLDN6P56747 220 aa0.84□□□□□ -2.27
GYPB-209ENST00000508618 RPS15AP62244 130 aaKnown RBP0.84□□□□□ -2.27
GYPB-209ENST00000508618 ITIH4Q14624 930 aa0.84□□□□□ -2.27
GYPB-209ENST00000508618 TPRG1LQ5T0D9 272 aa0.84□□□□□ -2.27
GYPB-209ENST00000508618 ZNF660Q6AZW8 331 aaPredicted RBP0.84□□□□□ -2.27
GYPB-209ENST00000508618 FAM131AQ6UXB0 335 aa0.84□□□□□ -2.27
GYPB-209ENST00000508618 ANGPTL8Q6UXH0 198 aa0.84□□□□□ -2.27
GYPB-209ENST00000508618 SLC30A8Q8IWU4 369 aa0.84□□□□□ -2.27
GYPB-209ENST00000508618 INO80EQ8NBZ0 244 aaPredicted RBP0.84□□□□□ -2.27
GYPB-209ENST00000508618 OR8K3Q8NH51 312 aa0.84□□□□□ -2.27
GYPB-209ENST00000508618 ACTL9Q8TC94 416 aa0.84□□□□□ -2.27
GYPB-209ENST00000508618 YIPF6Q96EC8 236 aa0.84□□□□□ -2.27
GYPB-209ENST00000508618 TMEM175Q9BSA9 504 aa0.84□□□□□ -2.27
GYPB-209ENST00000508618 MTG1Q9BT17 334 aaPredicted RBP0.84□□□□□ -2.27
GYPB-209ENST00000508618 STMN4Q9H169 189 aaPredicted RBP0.84□□□□□ -2.27
GYPB-209ENST00000508618 BEX1Q9HBH7 125 aa0.84□□□□□ -2.27
GYPB-209ENST00000508618 ABCB9Q9NP78 766 aa0.84□□□□□ -2.27
GYPB-209ENST00000508618 OR2S2Q9NQN1 319 aa0.84□□□□□ -2.27
GYPB-209ENST00000508618 MYEF2Q9P2K5 600 aaKnown RBP0.84□□□□□ -2.27
GYPB-209ENST00000508618 NDRG2Q9UN36 371 aaKnown RBP0.84□□□□□ -2.27
GYPB-209ENST00000508618 BAZ1BQ9UIG0 1483 aaKnown RBP0.84□□□□□ -2.28
GYPB-209ENST00000508618 SBNO1A3KN83 1393 aa0.83□□□□□ -2.28
GYPB-209ENST00000508618 WRBO00258 174 aa0.83□□□□□ -2.28
GYPB-209ENST00000508618 CASQ2O14958 399 aaPredicted RBP0.83□□□□□ -2.28
GYPB-209ENST00000508618 SLC19A2O60779 497 aa0.83□□□□□ -2.28
GYPB-209ENST00000508618 HSBP1O75506 76 aa0.83□□□□□ -2.28
GYPB-209ENST00000508618 IGHV3-53P01767 116 aa0.83□□□□□ -2.28
GYPB-209ENST00000508618 KRT16P08779 473 aa0.83□□□□□ -2.28
GYPB-209ENST00000508618 UBCP0CG48 685 aaKnown RBP0.83□□□□□ -2.28
GYPB-209ENST00000508618 HLA-GP17693 338 aa0.83□□□□□ -2.28
GYPB-209ENST00000508618 TEAD1P28347 426 aa0.83□□□□□ -2.28
GYPB-209ENST00000508618 ARL2P36404 184 aa0.83□□□□□ -2.28
GYPB-209ENST00000508618 GPR1P46091 355 aa0.83□□□□□ -2.28
GYPB-209ENST00000508618 PSMB2P49721 201 aa0.83□□□□□ -2.28
GYPB-209ENST00000508618 FOXA1P55317 472 aa0.83□□□□□ -2.28
GYPB-209ENST00000508618 MTPNP58546 118 aa0.83□□□□□ -2.28
GYPB-209ENST00000508618 UBE2MP61081 183 aaKnown RBP0.83□□□□□ -2.28
GYPB-209ENST00000508618 ADIGQ0VDE8 80 aa0.83□□□□□ -2.28
GYPB-209ENST00000508618 ZNF141Q15928 474 aa0.83□□□□□ -2.28
GYPB-209ENST00000508618 LDLRAD2Q5SZI1 272 aa0.83□□□□□ -2.28
GYPB-209ENST00000508618 KDM4DQ6B0I6 523 aa0.83□□□□□ -2.28
GYPB-209ENST00000508618 Q6ZQT7 251 aa0.83□□□□□ -2.28
GYPB-209ENST00000508618 PDPNQ86YL7 162 aa0.83□□□□□ -2.28
GYPB-209ENST00000508618 COMMD1Q8N668 190 aa0.83□□□□□ -2.28
GYPB-209ENST00000508618 BPIFB6Q8NFQ5 453 aa0.83□□□□□ -2.28
GYPB-209ENST00000508618 OR4D6Q8NGJ1 314 aa0.83□□□□□ -2.28
GYPB-209ENST00000508618 FAM57AQ8TBR7 257 aa0.83□□□□□ -2.28
GYPB-209ENST00000508618 ZFAND1Q8TCF1 268 aa0.83□□□□□ -2.28
GYPB-209ENST00000508618 TMEM159Q96B96 161 aa0.83□□□□□ -2.28
GYPB-209ENST00000508618 RNF170Q96K19 258 aa0.83□□□□□ -2.28
GYPB-209ENST00000508618 SCGB3A2Q96PL1 93 aa0.83□□□□□ -2.28
GYPB-209ENST00000508618 CSPG4P5Q96PW8 444 aa0.83□□□□□ -2.28
GYPB-209ENST00000508618 ZNF649Q9BS31 505 aa0.83□□□□□ -2.28
GYPB-209ENST00000508618 VSIRQ9H7M9 311 aa0.83□□□□□ -2.28
GYPB-209ENST00000508618 LYRM4Q9HD34 91 aa0.83□□□□□ -2.28
GYPB-209ENST00000508618 CA10Q9NS85 328 aa0.83□□□□□ -2.28
GYPB-209ENST00000508618 PTTG3PQ9NZH4 202 aa0.83□□□□□ -2.28
GYPB-209ENST00000508618 OR51B2Q9Y5P1 312 aa0.83□□□□□ -2.28
GYPB-209ENST00000508618 COL11A1P12107 1806 aaPredicted RBP0.82□□□□□ -2.28
GYPB-209ENST00000508618 TRAV8-4A0A0B4J246 113 aa0.82□□□□□ -2.28
GYPB-209ENST00000508618 TRAV8-6A0A0B4J262 113 aa0.82□□□□□ -2.28
GYPB-209ENST00000508618 TRAV25A0A0B4J276 109 aa0.82□□□□□ -2.28
GYPB-209ENST00000508618 IGHV2OR16-5A0A0B4J2B6 119 aa0.82□□□□□ -2.28
GYPB-209ENST00000508618 MYBPHLA2RUH7 354 aa0.82□□□□□ -2.28
GYPB-209ENST00000508618 SLC22A20A6NK97 555 aa0.82□□□□□ -2.28
GYPB-209ENST00000508618 HACD1B0YJ81 288 aa0.82□□□□□ -2.28
GYPB-209ENST00000508618 H3BN98 237 aa0.82□□□□□ -2.28
GYPB-209ENST00000508618 UPK1AO00322 258 aa0.82□□□□□ -2.28
GYPB-209ENST00000508618 ZBTB5O15062 677 aa0.82□□□□□ -2.28
GYPB-209ENST00000508618 MPDU1O75352 247 aa0.82□□□□□ -2.28
GYPB-209ENST00000508618 CDS2O95674 445 aa0.82□□□□□ -2.28
GYPB-209ENST00000508618 P01737 135 aa0.82□□□□□ -2.28
GYPB-209ENST00000508618 CATP04040 527 aaKnown RBP0.82□□□□□ -2.28
GYPB-209ENST00000508618 SLC1A2P43004 574 aa0.82□□□□□ -2.28
GYPB-209ENST00000508618 KRTAP12-1P59990 96 aa0.82□□□□□ -2.28
GYPB-209ENST00000508618 GRB2P62993 217 aaKnown RBP0.82□□□□□ -2.28
GYPB-209ENST00000508618 SLC35A1P78382 337 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms