RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 CXCL16Q9H2A7 254 aa6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 ING1Q9UK53 422 aaPredicted RBP6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 PKD1L3Q7Z443 1732 aa6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 LRP5O75197 1615 aa6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 C3orf85A0A1B0GTC6 90 aa6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 DBX1A6NMT0 343 aa6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 OR7C2O60412 319 aa6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 SEMA7AO75326 666 aa6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 DEDDO75618 318 aa6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 ONECUT2O95948 504 aa6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 EMDP50402 254 aa6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 FZD2Q14332 565 aa6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 SHBQ15464 509 aa6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 SMAD2Q15796 467 aaKnown RBP6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 NUFIP2Q7Z417 695 aaKnown RBP6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 LURAP1LQ8IV03 231 aa6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 OR11G2Q8NGC1 345 aa6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 PARD6GQ9BYG4 376 aaPredicted RBP6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 TLNRD1Q9H1K6 362 aa6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 MARCH5Q9NX47 278 aa6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 PPP1R3CQ9UQK1 317 aa6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 FGF17O60258 216 aa6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 F12P00748 615 aaPredicted RBP6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 TIAL1Q01085 375 aaKnown RBP eCLIP6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 ZNF542PQ5EBM4 170 aa6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 ZNF343Q6P1L6 599 aa6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 VWA1Q6PCB0 445 aa6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 CISD2Q8N5K1 135 aaKnown RBP6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 OR10G8Q8NGN5 311 aa6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 PTX4Q96A99 478 aa6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 FBXO17Q96EF6 278 aa6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 ARHGAP5-AS1Q96IT6 56 aa6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 SPACA5Q96QH8 159 aa6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 VN1R1Q9GZP7 353 aa6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 POLDIP2Q9Y2S7 368 aa6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 CCL27Q9Y4X3 112 aa6.56□□□□□ -1.36
UBE2D3-224ENST00000508474 ZNF732B4DXR9 585 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 ADAM20O43506 726 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 ZNF253O75346 499 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 OR2A4O95047 310 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 F11P03951 625 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 HSPB1P04792 205 aaKnown RBP6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 VSIG10L2P0DP72 767 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 HLA-GP17693 338 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 ENPP1P22413 925 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 GNG4P50150 75 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 FUT6P51993 359 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 RAC1P63000 192 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 SRYQ05066 204 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 OR2A1Q8NGT9 310 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 OR2A7Q96R45 310 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 TP53RKQ96S44 253 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 RTL8AQ9BWD3 113 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 STRADBQ9C0K7 418 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 ST3GAL6Q9Y274 331 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 TIMM10BQ9Y5J6 103 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 M0R2Z0 102 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 CDC14BO60729 498 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 ABLIM3O94929 683 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 FUT3P21217 361 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 BMP5P22003 454 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 CSN1S1P47710 185 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 CDC34P49427 236 aaPredicted RBP6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 RTL8BQ17RB0 113 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 TGIF2LXQ8IUE1 241 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 NT5CQ8TCD5 201 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 FGF14Q92915 247 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 IL21Q9HBE4 155 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 UQCR10Q9UDW1 63 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 PAM16Q9Y3D7 125 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 LINC00587B1AMM8 73 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 FFAR1O14842 300 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 PDE6DO43924 150 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 WDR1O75083 606 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 ZNF217O75362 1048 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 TIMP1P01033 207 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 IGHEP01854 428 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 OPN1LWP04000 364 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 RPS27P42677 84 aaKnown RBP6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 MMP16P51512 607 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 ZNF124Q15973 351 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 HIST3H3Q16695 136 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 ISXQ2M1V0 245 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 SP6Q3SY56 376 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 OR10G4Q8NGN3 311 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 OR10G9Q8NGN4 311 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 OR10G7Q8NGN6 311 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 ZG16BQ96DA0 208 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 SMIM12Q96EX1 92 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 TMEM147Q9BVK8 224 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 SLC45A2Q9UMX9 530 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 SSC5DA1L4H1 1573 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 IGLV3-16A0A075B6K0 115 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 TLCD2A6NGC4 264 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 DIRC3C9JPN6 131 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 CDS2O95674 445 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 PGA4P0DJD7 388 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 PGA5P0DJD9 388 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 HOXA6P31267 233 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 ZNF121P58317 390 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms