RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 FOXRED1Q96CU9 486 aaPredicted RBP16.97■□□□□ 0.31
USP53-203ENST00000507597 GPER1Q99527 375 aa16.97■□□□□ 0.31
USP53-203ENST00000507597 PKIBQ9C010 78 aa16.97■□□□□ 0.31
USP53-203ENST00000507597 OR51I2Q9H344 312 aa16.97■□□□□ 0.31
USP53-203ENST00000507597 C1orf123Q9NWV4 160 aa16.97■□□□□ 0.31
USP53-203ENST00000507597 TAS2R4Q9NYW5 299 aa16.97■□□□□ 0.31
USP53-203ENST00000507597 ITGB1BP2Q9UKP3 347 aa16.97■□□□□ 0.31
USP53-203ENST00000507597 SPG11Q96JI7 2443 aa16.97■□□□□ 0.31
USP53-203ENST00000507597 FBN2P35556 2912 aa16.97■□□□□ 0.31
USP53-203ENST00000507597 J3QT63 122 aa16.96■□□□□ 0.31
USP53-203ENST00000507597 PPIHO43447 177 aaKnown RBP16.96■□□□□ 0.31
USP53-203ENST00000507597 UCHL1P09936 223 aa16.96■□□□□ 0.31
USP53-203ENST00000507597 SRMP19623 302 aa16.96■□□□□ 0.31
USP53-203ENST00000507597 MYL9P24844 172 aa16.96■□□□□ 0.31
USP53-203ENST00000507597 CFHR2P36980 270 aa16.96■□□□□ 0.31
USP53-203ENST00000507597 GP2P55259 537 aaKnown RBP16.96■□□□□ 0.31
USP53-203ENST00000507597 ZNF529Q6P280 563 aa16.96■□□□□ 0.31
USP53-203ENST00000507597 CD200R1LQ6Q8B3 271 aa16.96■□□□□ 0.31
USP53-203ENST00000507597 ZNF525Q8N782 197 aa16.96■□□□□ 0.31
USP53-203ENST00000507597 SCCPDHQ8NBX0 429 aa16.96■□□□□ 0.31
USP53-203ENST00000507597 NPRL2Q8WTW4 380 aa16.96■□□□□ 0.31
USP53-203ENST00000507597 EXOSC4Q9NPD3 245 aaKnown RBP16.96■□□□□ 0.31
USP53-203ENST00000507597 PCDHB16Q9NRJ7 776 aa16.96■□□□□ 0.31
USP53-203ENST00000507597 NPTNQ9Y639 398 aa16.96■□□□□ 0.31
USP53-203ENST00000507597 ABCA12Q86UK0 2595 aa16.96■□□□□ 0.31
USP53-203ENST00000507597 AKAP6Q13023 2319 aa16.96■□□□□ 0.3
USP53-203ENST00000507597 A0A1W2PPK0 400 aa16.95■□□□□ 0.3
USP53-203ENST00000507597 CDIPTO14735 213 aa16.95■□□□□ 0.3
USP53-203ENST00000507597 PDCD5O14737 125 aa16.95■□□□□ 0.3
USP53-203ENST00000507597 IGFBP3P17936 291 aaPredicted RBP16.95■□□□□ 0.3
USP53-203ENST00000507597 GIFP27352 417 aa16.95■□□□□ 0.3
USP53-203ENST00000507597 FABP5Q01469 135 aa16.95■□□□□ 0.3
USP53-203ENST00000507597 MPPED2Q15777 294 aa16.95■□□□□ 0.3
USP53-203ENST00000507597 GLT8D1Q68CQ7 371 aa16.95■□□□□ 0.3
USP53-203ENST00000507597 HAGHLQ6PII5 290 aaPredicted RBP16.95■□□□□ 0.3
USP53-203ENST00000507597 SATL1Q86VE3 508 aa16.95■□□□□ 0.3
USP53-203ENST00000507597 RPL3LQ92901 407 aaKnown RBP16.95■□□□□ 0.3
USP53-203ENST00000507597 YIPF5Q969M3 257 aa16.95■□□□□ 0.3
USP53-203ENST00000507597 S100A13Q99584 98 aa16.95■□□□□ 0.3
USP53-203ENST00000507597 PPP1R3EQ9H7J1 279 aa16.95■□□□□ 0.3
USP53-203ENST00000507597 SNTG1Q9NSN8 517 aa16.95■□□□□ 0.3
USP53-203ENST00000507597 IGKV1-9A0A0C4DH69 117 aa16.94■□□□□ 0.3
USP53-203ENST00000507597 IGHV3-64DA0A0J9YX35 117 aa16.94■□□□□ 0.3
USP53-203ENST00000507597 TMEM178BH3BS89 294 aa16.94■□□□□ 0.3
USP53-203ENST00000507597 LY6HO94772 140 aa16.94■□□□□ 0.3
USP53-203ENST00000507597 FSTL3O95633 263 aa16.94■□□□□ 0.3
USP53-203ENST00000507597 HEXAP06865 529 aa16.94■□□□□ 0.3
USP53-203ENST00000507597 ACAA1P09110 424 aaPredicted RBP16.94■□□□□ 0.3
USP53-203ENST00000507597 SMIM18P0DKX4 95 aa16.94■□□□□ 0.3
USP53-203ENST00000507597 FGF9P31371 208 aaPredicted RBP16.94■□□□□ 0.3
USP53-203ENST00000507597 IL24Q13007 206 aa16.94■□□□□ 0.3
USP53-203ENST00000507597 KISS1Q15726 138 aa16.94■□□□□ 0.3
USP53-203ENST00000507597 DDI2Q5TDH0 399 aa16.94■□□□□ 0.3
USP53-203ENST00000507597 TMEM91Q6ZNR0 172 aa16.94■□□□□ 0.3
USP53-203ENST00000507597 GPR141Q7Z602 305 aa16.94■□□□□ 0.3
USP53-203ENST00000507597 Q8IYB0 196 aa16.94■□□□□ 0.3
USP53-203ENST00000507597 MUC20Q8N307 709 aaPredicted RBP16.94■□□□□ 0.3
USP53-203ENST00000507597 ZSCAN4Q8NAM6 433 aaPredicted RBP16.94■□□□□ 0.3
USP53-203ENST00000507597 ZNF420Q8TAQ5 688 aaPredicted RBP16.94■□□□□ 0.3
USP53-203ENST00000507597 C10orf105Q8TEF2 133 aa16.94■□□□□ 0.3
USP53-203ENST00000507597 RHOFQ9HBH0 211 aa16.94■□□□□ 0.3
USP53-203ENST00000507597 RASL12Q9NYN1 266 aa16.94■□□□□ 0.3
USP53-203ENST00000507597 ANKRD17O75179 2603 aaKnown RBP16.94■□□□□ 0.3
USP53-203ENST00000507597 USF3Q68DE3 2245 aa16.93■□□□□ 0.3
USP53-203ENST00000507597 PPIAL4EA0A075B759 164 aa16.93■□□□□ 0.3
USP53-203ENST00000507597 TRAV38-1A0A0B4J264 116 aa16.93■□□□□ 0.3
USP53-203ENST00000507597 PPIAL4DF5H284 164 aa16.93■□□□□ 0.3
USP53-203ENST00000507597 LYNX1G3V0Z9 82 aa16.93■□□□□ 0.3
USP53-203ENST00000507597 RP2O75695 350 aa16.93■□□□□ 0.3
USP53-203ENST00000507597 MAS1P04201 325 aa16.93■□□□□ 0.3
USP53-203ENST00000507597 PPIAL4FP0DN26 164 aa16.93■□□□□ 0.3
USP53-203ENST00000507597 LYNX1P0DP58 116 aa16.93■□□□□ 0.3
USP53-203ENST00000507597 CALRP27797 417 aaKnown RBP16.93■□□□□ 0.3
USP53-203ENST00000507597 ZNF93P35789 620 aaPredicted RBP16.93■□□□□ 0.3
USP53-203ENST00000507597 RPL5P46777 297 aaKnown RBP16.93■□□□□ 0.3
USP53-203ENST00000507597 RIN1Q13671 783 aa16.93■□□□□ 0.3
USP53-203ENST00000507597 FIP1L1Q6UN15 594 aaKnown RBP16.93■□□□□ 0.3
USP53-203ENST00000507597 WDR82Q6UXN9 313 aa16.93■□□□□ 0.3
USP53-203ENST00000507597 SAXO1Q8IYX7 474 aa16.93■□□□□ 0.3
USP53-203ENST00000507597 LRRC29Q8WV35 223 aa16.93■□□□□ 0.3
USP53-203ENST00000507597 AQP3Q92482 292 aa16.93■□□□□ 0.3
USP53-203ENST00000507597 TREM2Q9NZC2 230 aa16.93■□□□□ 0.3
USP53-203ENST00000507597 PPIAL4AQ9Y536 164 aa16.93■□□□□ 0.3
USP53-203ENST00000507597 TACC2O95359 2948 aa16.93■□□□□ 0.3
USP53-203ENST00000507597 TRAPPC2LH3BP13 241 aa16.92■□□□□ 0.3
USP53-203ENST00000507597 NDUFA2O43678 99 aa16.92■□□□□ 0.3
USP53-203ENST00000507597 CPT2P23786 658 aa16.92■□□□□ 0.3
USP53-203ENST00000507597 MPZP25189 248 aa16.92■□□□□ 0.3
USP53-203ENST00000507597 POU3F4P49335 361 aa16.92■□□□□ 0.3
USP53-203ENST00000507597 BMXP51813 675 aa16.92■□□□□ 0.3
USP53-203ENST00000507597 DMRTC1Q5HYR2 192 aa16.92■□□□□ 0.3
USP53-203ENST00000507597 WDR86Q86TI4 376 aa16.92■□□□□ 0.3
USP53-203ENST00000507597 KCTD7Q96MP8 289 aa16.92■□□□□ 0.3
USP53-203ENST00000507597 UQCC2Q9BRT2 126 aa16.92■□□□□ 0.3
USP53-203ENST00000507597 NBPF19A0A087WUL8 3843 aa16.92■□□□□ 0.3
USP53-203ENST00000507597 TRAV1-2A0A0B4J238 106 aa16.91■□□□□ 0.3
USP53-203ENST00000507597 PIN1P1O15428 100 aa16.91■□□□□ 0.3
USP53-203ENST00000507597 NOS1APO75052 506 aaPredicted RBP16.91■□□□□ 0.3
USP53-203ENST00000507597 CYB5R3P00387 301 aaPredicted RBP16.91■□□□□ 0.3
USP53-203ENST00000507597 TMEM225BP0DP42 221 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms