RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 LOC110117498-PIK3R3F6TDL0 507 aa11.86□□□□□ -0.51
HMGCS1-203ENST00000507004 G3V2T6 193 aa11.86□□□□□ -0.51
HMGCS1-203ENST00000507004 DLGAP1O14490 977 aa11.86□□□□□ -0.51
HMGCS1-203ENST00000507004 GPR137BO60478 399 aa11.86□□□□□ -0.51
HMGCS1-203ENST00000507004 FCN3O75636 299 aa11.86□□□□□ -0.51
HMGCS1-203ENST00000507004 NDUFB7P17568 137 aa11.86□□□□□ -0.51
HMGCS1-203ENST00000507004 AMY2BP19961 511 aa11.86□□□□□ -0.51
HMGCS1-203ENST00000507004 FASP25445 335 aa11.86□□□□□ -0.51
HMGCS1-203ENST00000507004 UBE2E1P51965 193 aa11.86□□□□□ -0.51
HMGCS1-203ENST00000507004 SLX4IPQ5VYV7 408 aa11.86□□□□□ -0.51
HMGCS1-203ENST00000507004 PLCXD3Q63HM9 321 aa11.86□□□□□ -0.51
HMGCS1-203ENST00000507004 ZNF322Q6U7Q0 402 aaPredicted RBP11.86□□□□□ -0.51
HMGCS1-203ENST00000507004 OR5T2Q8NGG2 359 aa11.86□□□□□ -0.51
HMGCS1-203ENST00000507004 WFDC12Q8WWY7 111 aa11.86□□□□□ -0.51
HMGCS1-203ENST00000507004 UTP4Q969X6 686 aaKnown RBP11.86□□□□□ -0.51
HMGCS1-203ENST00000507004 SDSLQ96GA7 329 aa11.86□□□□□ -0.51
HMGCS1-203ENST00000507004 OSBPL10Q9BXB5 764 aa11.86□□□□□ -0.51
HMGCS1-203ENST00000507004 FAM234AQ9H0X4 552 aa11.86□□□□□ -0.51
HMGCS1-203ENST00000507004 WDR13Q9H1Z4 485 aa11.86□□□□□ -0.51
HMGCS1-203ENST00000507004 TNFRSF19Q9NS68 423 aa11.86□□□□□ -0.51
HMGCS1-203ENST00000507004 SNTG1Q9NSN8 517 aa11.86□□□□□ -0.51
HMGCS1-203ENST00000507004 CLN6Q9NWW5 311 aa11.86□□□□□ -0.51
HMGCS1-203ENST00000507004 SNX5Q9Y5X3 404 aa11.86□□□□□ -0.51
HMGCS1-203ENST00000507004 M0QZ24 198 aa11.85□□□□□ -0.51
HMGCS1-203ENST00000507004 NPFFO15130 113 aa11.85□□□□□ -0.51
HMGCS1-203ENST00000507004 NOS1APO75052 506 aaPredicted RBP11.85□□□□□ -0.51
HMGCS1-203ENST00000507004 NRASP01111 189 aa11.85□□□□□ -0.51
HMGCS1-203ENST00000507004 MRPL3P09001 348 aaKnown RBP11.85□□□□□ -0.51
HMGCS1-203ENST00000507004 OMGP23515 440 aa11.85□□□□□ -0.51
HMGCS1-203ENST00000507004 TGFBR2P37173 567 aa11.85□□□□□ -0.51
HMGCS1-203ENST00000507004 GABRA2P47869 451 aa11.85□□□□□ -0.51
HMGCS1-203ENST00000507004 DAPP51397 102 aa11.85□□□□□ -0.51
HMGCS1-203ENST00000507004 TMED1Q13445 227 aa11.85□□□□□ -0.51
HMGCS1-203ENST00000507004 ATP6AP1Q15904 470 aa11.85□□□□□ -0.51
HMGCS1-203ENST00000507004 DGUOKQ16854 277 aa11.85□□□□□ -0.51
HMGCS1-203ENST00000507004 CLVS2Q5SYC1 327 aa11.85□□□□□ -0.51
HMGCS1-203ENST00000507004 HAGHLQ6PII5 290 aaPredicted RBP11.85□□□□□ -0.51
HMGCS1-203ENST00000507004 MOB3CQ70IA8 216 aa11.85□□□□□ -0.51
HMGCS1-203ENST00000507004 PIP4P2Q8N4L2 257 aa11.85□□□□□ -0.51
HMGCS1-203ENST00000507004 ZNF561Q8N587 486 aa11.85□□□□□ -0.51
HMGCS1-203ENST00000507004 POC1AQ8NBT0 407 aa11.85□□□□□ -0.51
HMGCS1-203ENST00000507004 TMEM163Q8TC26 289 aa11.85□□□□□ -0.51
HMGCS1-203ENST00000507004 OR51E1Q8TCB6 317 aa11.85□□□□□ -0.51
HMGCS1-203ENST00000507004 AQP3Q92482 292 aa11.85□□□□□ -0.51
HMGCS1-203ENST00000507004 GABARAPL1Q9H0R8 117 aa11.85□□□□□ -0.51
HMGCS1-203ENST00000507004 PPP1R3EQ9H7J1 279 aa11.85□□□□□ -0.51
HMGCS1-203ENST00000507004 SIRT7Q9NRC8 400 aa11.85□□□□□ -0.51
HMGCS1-203ENST00000507004 ZNRD1Q9P1U0 126 aa11.85□□□□□ -0.51
HMGCS1-203ENST00000507004 WARS2Q9UGM6 360 aaKnown RBP11.85□□□□□ -0.51
HMGCS1-203ENST00000507004 VPREB3Q9UKI3 123 aa11.85□□□□□ -0.51
HMGCS1-203ENST00000507004 PIGLQ9Y2B2 252 aa11.85□□□□□ -0.51
HMGCS1-203ENST00000507004 RNF114Q9Y508 228 aa11.85□□□□□ -0.51
HMGCS1-203ENST00000507004 R4GMQ9 66 aa11.85□□□□□ -0.51
HMGCS1-203ENST00000507004 A0A1B0GW55 424 aa11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 ZAR1LA6NP61 321 aa11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 J3QT63 122 aa11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 SLC1A7O00341 560 aa11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 PRKYO43930 277 aa11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 CLPXO76031 633 aa11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 IGHV4-59P01825 116 aa11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 KRT8P05787 483 aa11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 DUX4L2P0CJ85 424 aa11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 DUX4L3P0CJ86 424 aa11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 DUX4L4P0CJ87 422 aa11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 DUX4L5P0CJ88 424 aa11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 DUX4L6P0CJ89 424 aa11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 DUX4L7P0CJ90 424 aa11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 PSG2P11465 335 aa11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 GMFBP60983 142 aa11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 CXCR4P61073 352 aa11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 BNIP1Q12981 228 aa11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 AANATQ16613 207 aa11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 MIDNQ504T8 468 aa11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 CEP78Q5JTW2 689 aa11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 BCL2L15Q5TBC7 163 aa11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 AADACL4Q5VUY2 407 aa11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 DHRS7BQ6IAN0 325 aaPredicted RBP11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 BRICD5Q6PL45 260 aa11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 DUX4L9Q6RFH8 374 aaPredicted RBP11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 SLC35F2Q8IXU6 374 aa11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 ELMOD2Q8IZ81 293 aa11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 TCEANCQ8N8B7 351 aa11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 ZSCAN4Q8NAM6 433 aaPredicted RBP11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 TMEM185AQ8NFB2 350 aa11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 SEH1LQ96EE3 360 aa11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 CITED1Q99966 193 aa11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 C16orf95Q9H693 158 aa11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 DUX4Q9UBX2 424 aa11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 ZNF222Q9UK12 451 aa11.84□□□□□ -0.51
HMGCS1-203ENST00000507004 IGKV1D-17A0A075B6S4 117 aa11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 H0YAE9 185 aa11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 RNASEK-C17orf49H0YIS7 233 aa11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 PSMD9O00233 223 aa11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 RHBDL1O75783 438 aa11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 TTRP02766 147 aa11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 OR2T7P0C7T2 308 aa11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 FAHP16930 419 aa11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 CAPZA1P52907 286 aa11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 HCCSP53701 268 aa11.83□□□□□ -0.52
HMGCS1-203ENST00000507004 EFNB1P98172 346 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms