RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 TRAV38-1A0A0B4J264 116 aa15.21■□□□□ 0.03
PDLIM7-216ENST00000506537 AKR7A2O43488 359 aa15.21■□□□□ 0.03
PDLIM7-216ENST00000506537 FOXH1O75593 365 aa15.21■□□□□ 0.03
PDLIM7-216ENST00000506537 FCN3O75636 299 aa15.21■□□□□ 0.03
PDLIM7-216ENST00000506537 LALBAP00709 142 aa15.21■□□□□ 0.03
PDLIM7-216ENST00000506537 GYPAP02724 150 aa15.21■□□□□ 0.03
PDLIM7-216ENST00000506537 MYL12AP19105 171 aa15.21■□□□□ 0.03
PDLIM7-216ENST00000506537 GBX2P52951 348 aaPredicted RBP15.21■□□□□ 0.03
PDLIM7-216ENST00000506537 GMFBP60983 142 aa15.21■□□□□ 0.03
PDLIM7-216ENST00000506537 ESCO2Q56NI9 601 aa15.21■□□□□ 0.03
PDLIM7-216ENST00000506537 HAGHLQ6PII5 290 aaPredicted RBP15.21■□□□□ 0.03
PDLIM7-216ENST00000506537 ZNF841Q6ZN19 808 aa15.21■□□□□ 0.03
PDLIM7-216ENST00000506537 ZNF676Q8N7Q3 588 aa15.21■□□□□ 0.03
PDLIM7-216ENST00000506537 ZNF485Q8NCK3 441 aa15.21■□□□□ 0.03
PDLIM7-216ENST00000506537 RPS4Y2Q8TD47 263 aa15.21■□□□□ 0.03
PDLIM7-216ENST00000506537 NPRL2Q8WTW4 380 aa15.21■□□□□ 0.03
PDLIM7-216ENST00000506537 AQP3Q92482 292 aa15.21■□□□□ 0.03
PDLIM7-216ENST00000506537 C10orf35Q96D05 121 aa15.21■□□□□ 0.03
PDLIM7-216ENST00000506537 PDCD1LG2Q9BQ51 273 aa15.21■□□□□ 0.03
PDLIM7-216ENST00000506537 ANKRD60Q9BZ19 345 aa15.21■□□□□ 0.03
PDLIM7-216ENST00000506537 SHARPINQ9H0F6 387 aa15.21■□□□□ 0.03
PDLIM7-216ENST00000506537 MMP26Q9NRE1 261 aa15.21■□□□□ 0.03
PDLIM7-216ENST00000506537 HHLA2Q9UM44 414 aa15.21■□□□□ 0.03
PDLIM7-216ENST00000506537 POLR3KQ9Y2Y1 108 aaPredicted RBP15.21■□□□□ 0.03
PDLIM7-216ENST00000506537 SIRT4Q9Y6E7 314 aaPredicted RBP15.21■□□□□ 0.03
PDLIM7-216ENST00000506537 TRAPPC2LH3BP13 241 aa15.2■□□□□ 0.02
PDLIM7-216ENST00000506537 SYNGR1O43759 233 aa15.2■□□□□ 0.02
PDLIM7-216ENST00000506537 AVPP01185 164 aa15.2■□□□□ 0.02
PDLIM7-216ENST00000506537 ZNF12P17014 697 aa15.2■□□□□ 0.02
PDLIM7-216ENST00000506537 MYF6P23409 242 aa15.2■□□□□ 0.02
PDLIM7-216ENST00000506537 CPT2P23786 658 aa15.2■□□□□ 0.02
PDLIM7-216ENST00000506537 C21orf33P30042 268 aaPredicted RBP15.2■□□□□ 0.02
PDLIM7-216ENST00000506537 PITPNBP48739 271 aa15.2■□□□□ 0.02
PDLIM7-216ENST00000506537 DOC2BQ14184 412 aa15.2■□□□□ 0.02
PDLIM7-216ENST00000506537 C6orf141Q5SZD1 244 aa15.2■□□□□ 0.02
PDLIM7-216ENST00000506537 TMPRSS11AQ6ZMR5 421 aa15.2■□□□□ 0.02
PDLIM7-216ENST00000506537 C1orf229Q6ZS94 237 aaPredicted RBP15.2■□□□□ 0.02
PDLIM7-216ENST00000506537 PRIMA1Q86XR5 153 aa15.2■□□□□ 0.02
PDLIM7-216ENST00000506537 OR8B3Q8NGG8 313 aa15.2■□□□□ 0.02
PDLIM7-216ENST00000506537 OR52N1Q8NH53 320 aa15.2■□□□□ 0.02
PDLIM7-216ENST00000506537 TRMT10AQ8TBZ6 339 aaKnown RBP15.2■□□□□ 0.02
PDLIM7-216ENST00000506537 RGP1Q92546 391 aaPredicted RBP15.2■□□□□ 0.02
PDLIM7-216ENST00000506537 FGGYQ96C11 551 aa15.2■□□□□ 0.02
PDLIM7-216ENST00000506537 OR8B2Q96RD0 313 aa15.2■□□□□ 0.02
PDLIM7-216ENST00000506537 SSBP3Q9BWW4 388 aaPredicted RBP15.2■□□□□ 0.02
PDLIM7-216ENST00000506537 BEX2Q9BXY8 128 aa15.2■□□□□ 0.02
PDLIM7-216ENST00000506537 TMPRSS13Q9BYE2 586 aa15.2■□□□□ 0.02
PDLIM7-216ENST00000506537 TRIM36Q9NQ86 728 aa15.2■□□□□ 0.02
PDLIM7-216ENST00000506537 LPAR3Q9UBY5 353 aa15.2■□□□□ 0.02
PDLIM7-216ENST00000506537 WNK2Q9Y3S1 2297 aa15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 IGKV1-27A0A075B6S5 117 aa15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 IGKV1-9A0A0C4DH69 117 aa15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 A0A0G2JMP0 313 aa15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 A0A0X1KG70 313 aa15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 A0A1B0GW55 424 aa15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 TMEM212A6NML5 194 aa15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 SLC1A7O00341 560 aa15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 ADAM20O43506 726 aa15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 CCDC159P0C7I6 412 aa15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 DUX4L2P0CJ85 424 aa15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 DUX4L3P0CJ86 424 aa15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 DUX4L4P0CJ87 422 aa15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 DUX4L5P0CJ88 424 aa15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 DUX4L6P0CJ89 424 aa15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 DUX4L7P0CJ90 424 aa15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 MUC1P15941 1255 aaPredicted RBP15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 AMY2BP19961 511 aa15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 HAAOP46952 286 aa15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 PAX2Q02962 417 aa15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 CDK5R1Q15078 307 aa15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 KCNJ8Q15842 424 aa15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 STUMQ69YW2 141 aa15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 FAHD2BQ6P2I3 314 aaPredicted RBP15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 DUX4L9Q6RFH8 374 aaPredicted RBP15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 NLRC3Q7RTR2 1065 aa15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 CALHM1Q8IU99 346 aa15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 OR4M2Q8NGB6 313 aa15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 OR13C3Q8NGS6 347 aa15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 HAVCR2Q8TDQ0 301 aa15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 PP6455Q8WZ26 134 aa15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 SGCDQ92629 289 aa15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 DACT3Q96B18 629 aaPredicted RBP15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 FAHD2AQ96GK7 314 aa15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 SMURF1Q9HCE7 757 aa15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 PAK1IP1Q9NWT1 392 aaPredicted RBP15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 DUX4Q9UBX2 424 aa15.19■□□□□ 0.02
PDLIM7-216ENST00000506537 PPIAL4CA0A0B4J2A2 164 aa15.18■□□□□ 0.02
PDLIM7-216ENST00000506537 TRBV2A0A0J9YWF9 115 aa15.18■□□□□ 0.02
PDLIM7-216ENST00000506537 J3QT63 122 aa15.18■□□□□ 0.02
PDLIM7-216ENST00000506537 GATBO75879 557 aaKnown RBP15.18■□□□□ 0.02
PDLIM7-216ENST00000506537 TFF1P04155 84 aa15.18■□□□□ 0.02
PDLIM7-216ENST00000506537 ZNF20P17024 532 aa15.18■□□□□ 0.02
PDLIM7-216ENST00000506537 PCMT1P22061 227 aa15.18■□□□□ 0.02
PDLIM7-216ENST00000506537 MPZP25189 248 aa15.18■□□□□ 0.02
PDLIM7-216ENST00000506537 GNB2P62879 340 aa15.18■□□□□ 0.02
PDLIM7-216ENST00000506537 MICBQ29980 383 aa15.18■□□□□ 0.02
PDLIM7-216ENST00000506537 CCDC58Q4VC31 144 aa15.18■□□□□ 0.02
PDLIM7-216ENST00000506537 DCAF12L2Q5VW00 463 aa15.18■□□□□ 0.02
PDLIM7-216ENST00000506537 WDR25Q64LD2 544 aaPredicted RBP15.18■□□□□ 0.02
PDLIM7-216ENST00000506537 RPL22L1Q6P5R6 122 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms