RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 ZNF671Q8TAW3 534 aa13.94□□□□□ -0.18
SNCA-209ENST00000506244 TFAP2CQ92754 450 aa13.94□□□□□ -0.18
SNCA-209ENST00000506244 FGF23Q9GZV9 251 aaPredicted RBP13.94□□□□□ -0.18
SNCA-209ENST00000506244 METTL17Q9H7H0 456 aaPredicted RBP13.94□□□□□ -0.18
SNCA-209ENST00000506244 CNOT2Q9NZN8 540 aaKnown RBP13.94□□□□□ -0.18
SNCA-209ENST00000506244 ERVK-18Q9QC07 812 aa13.94□□□□□ -0.18
SNCA-209ENST00000506244 CAB39Q9Y376 341 aaPredicted RBP13.94□□□□□ -0.18
SNCA-209ENST00000506244 NKX6-3A6NJ46 265 aa13.93□□□□□ -0.18
SNCA-209ENST00000506244 KIAA1324LA8MWY0 1029 aaPredicted RBP13.93□□□□□ -0.18
SNCA-209ENST00000506244 J3QT63 122 aa13.93□□□□□ -0.18
SNCA-209ENST00000506244 ADAM20O43506 726 aa13.93□□□□□ -0.18
SNCA-209ENST00000506244 LIMS3P0CW19 117 aa13.93□□□□□ -0.18
SNCA-209ENST00000506244 LIMS4P0CW20 117 aa13.93□□□□□ -0.18
SNCA-209ENST00000506244 EGR1P18146 543 aa13.93□□□□□ -0.18
SNCA-209ENST00000506244 ZFP36P26651 326 aaKnown RBP13.93□□□□□ -0.18
SNCA-209ENST00000506244 HSPA13P48723 471 aa13.93□□□□□ -0.18
SNCA-209ENST00000506244 TGM4P49221 684 aa13.93□□□□□ -0.18
SNCA-209ENST00000506244 CCDC58Q4VC31 144 aa13.93□□□□□ -0.18
SNCA-209ENST00000506244 HAGHLQ6PII5 290 aaPredicted RBP13.93□□□□□ -0.18
SNCA-209ENST00000506244 BTNL3Q6UXE8 466 aa13.93□□□□□ -0.18
SNCA-209ENST00000506244 SLC36A1Q7Z2H8 476 aa13.93□□□□□ -0.18
SNCA-209ENST00000506244 FBLIM1Q8WUP2 373 aa13.93□□□□□ -0.18
SNCA-209ENST00000506244 RNF166Q96A37 237 aaPredicted RBP13.93□□□□□ -0.18
SNCA-209ENST00000506244 TMEM80Q96HE8 168 aa13.93□□□□□ -0.18
SNCA-209ENST00000506244 ZNF649Q9BS31 505 aa13.93□□□□□ -0.18
SNCA-209ENST00000506244 DNTTIP1Q9H147 329 aa13.93□□□□□ -0.18
SNCA-209ENST00000506244 ISG20L2Q9H9L3 353 aaKnown RBP13.93□□□□□ -0.18
SNCA-209ENST00000506244 PQLC2LA1A4F0 135 aa13.92□□□□□ -0.18
SNCA-209ENST00000506244 OR4C45A6NMZ5 311 aa13.92□□□□□ -0.18
SNCA-209ENST00000506244 H3BSH0 61 aa13.92□□□□□ -0.18
SNCA-209ENST00000506244 PHF1O43189 567 aaPredicted RBP13.92□□□□□ -0.18
SNCA-209ENST00000506244 GYPAP02724 150 aa13.92□□□□□ -0.18
SNCA-209ENST00000506244 GLRA1P23415 457 aa13.92□□□□□ -0.18
SNCA-209ENST00000506244 HAAOP46952 286 aa13.92□□□□□ -0.18
SNCA-209ENST00000506244 AQP4P55087 323 aa13.92□□□□□ -0.18
SNCA-209ENST00000506244 C11orf91Q3C1V1 193 aa13.92□□□□□ -0.18
SNCA-209ENST00000506244 CD276Q5ZPR3 534 aa13.92□□□□□ -0.18
SNCA-209ENST00000506244 WDR25Q64LD2 544 aaPredicted RBP13.92□□□□□ -0.18
SNCA-209ENST00000506244 OR13C3Q8NGS6 347 aa13.92□□□□□ -0.18
SNCA-209ENST00000506244 NRG4Q8WWG1 115 aa13.92□□□□□ -0.18
SNCA-209ENST00000506244 AQP3Q92482 292 aa13.92□□□□□ -0.18
SNCA-209ENST00000506244 MRI1Q9BV20 369 aa13.92□□□□□ -0.18
SNCA-209ENST00000506244 TMPRSS13Q9BYE2 586 aa13.92□□□□□ -0.18
SNCA-209ENST00000506244 NEK6Q9HC98 313 aa13.92□□□□□ -0.18
SNCA-209ENST00000506244 KAAG1Q9UBP8 84 aa13.92□□□□□ -0.18
SNCA-209ENST00000506244 JMJD1CQ15652 2540 aa13.92□□□□□ -0.18
SNCA-209ENST00000506244 IGHV3OR15-7A0A075B7D8 119 aa13.91□□□□□ -0.18
SNCA-209ENST00000506244 A6NIN4 97 aa13.91□□□□□ -0.18
SNCA-209ENST00000506244 TMPRSS2O15393 492 aa13.91□□□□□ -0.18
SNCA-209ENST00000506244 AKR7A2O43488 359 aa13.91□□□□□ -0.18
SNCA-209ENST00000506244 OCM2P0CE71 109 aa13.91□□□□□ -0.18
SNCA-209ENST00000506244 OCMP0CE72 109 aaPredicted RBP13.91□□□□□ -0.18
SNCA-209ENST00000506244 ETV1P50549 477 aa13.91□□□□□ -0.18
SNCA-209ENST00000506244 FUT6P51993 359 aa13.91□□□□□ -0.18
SNCA-209ENST00000506244 HOXA4Q00056 320 aaPredicted RBP13.91□□□□□ -0.18
SNCA-209ENST00000506244 RIPK1Q13546 671 aa13.91□□□□□ -0.18
SNCA-209ENST00000506244 SMIM21Q3B7S5 101 aa13.91□□□□□ -0.18
SNCA-209ENST00000506244 LYPD2Q6UXB3 125 aa13.91□□□□□ -0.18
SNCA-209ENST00000506244 UTS2BQ765I0 119 aa13.91□□□□□ -0.18
SNCA-209ENST00000506244 RDH10Q8IZV5 341 aa13.91□□□□□ -0.18
SNCA-209ENST00000506244 OR52N1Q8NH53 320 aa13.91□□□□□ -0.18
SNCA-209ENST00000506244 OR5AK2Q8NH90 309 aa13.91□□□□□ -0.18
SNCA-209ENST00000506244 SPSB1Q96BD6 273 aa13.91□□□□□ -0.18
SNCA-209ENST00000506244 TMIGD2Q96BF3 282 aa13.91□□□□□ -0.18
SNCA-209ENST00000506244 BORCS8Q96FH0 119 aa13.91□□□□□ -0.18
SNCA-209ENST00000506244 PKIBQ9C010 78 aa13.91□□□□□ -0.18
SNCA-209ENST00000506244 C7orf69Q9H7B7 122 aa13.91□□□□□ -0.18
SNCA-209ENST00000506244 PLCXD1Q9NUJ7 323 aa13.91□□□□□ -0.18
SNCA-209ENST00000506244 RASL12Q9NYN1 266 aa13.91□□□□□ -0.18
SNCA-209ENST00000506244 INSIG2Q9Y5U4 225 aa13.91□□□□□ -0.18
SNCA-209ENST00000506244 IGHV2-70DA0A0C4DH43 119 aa13.9□□□□□ -0.18
SNCA-209ENST00000506244 TRBV2A0A0J9YWF9 115 aa13.9□□□□□ -0.18
SNCA-209ENST00000506244 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.9□□□□□ -0.18
SNCA-209ENST00000506244 ENSAO43768 121 aaKnown RBP13.9□□□□□ -0.18
SNCA-209ENST00000506244 PRKACBP22694 351 aa13.9□□□□□ -0.18
SNCA-209ENST00000506244 MPZP25189 248 aa13.9□□□□□ -0.18
SNCA-209ENST00000506244 GMFBP60983 142 aa13.9□□□□□ -0.18
SNCA-209ENST00000506244 ST3GAL4Q11206 333 aa13.9□□□□□ -0.18
SNCA-209ENST00000506244 DMRTC1Q5HYR2 192 aa13.9□□□□□ -0.18
SNCA-209ENST00000506244 STUMQ69YW2 141 aa13.9□□□□□ -0.18
SNCA-209ENST00000506244 RPL22L1Q6P5R6 122 aaKnown RBP13.9□□□□□ -0.18
SNCA-209ENST00000506244 C1QL2Q7Z5L3 287 aa13.9□□□□□ -0.18
SNCA-209ENST00000506244 STX19Q8N4C7 294 aa13.9□□□□□ -0.18
SNCA-209ENST00000506244 POC1AQ8NBT0 407 aa13.9□□□□□ -0.18
SNCA-209ENST00000506244 DNAAF1Q8NEP3 725 aa13.9□□□□□ -0.18
SNCA-209ENST00000506244 TRMT10AQ8TBZ6 339 aaKnown RBP13.9□□□□□ -0.18
SNCA-209ENST00000506244 TSEN15Q8WW01 171 aaKnown RBP13.9□□□□□ -0.18
SNCA-209ENST00000506244 RAB40AQ8WXH6 277 aa13.9□□□□□ -0.18
SNCA-209ENST00000506244 GGHQ92820 318 aa13.9□□□□□ -0.18
SNCA-209ENST00000506244 NLKQ9UBE8 527 aa13.9□□□□□ -0.18
SNCA-209ENST00000506244 CTSZQ9UBR2 303 aa13.9□□□□□ -0.18
SNCA-209ENST00000506244 WNK2Q9Y3S1 2297 aa13.89□□□□□ -0.19
SNCA-209ENST00000506244 LOC105371242A0A075B767 164 aa13.89□□□□□ -0.19
SNCA-209ENST00000506244 FAM230AA0A1W2PPH8 454 aa13.89□□□□□ -0.19
SNCA-209ENST00000506244 TRAPPC2LH3BP13 241 aa13.89□□□□□ -0.19
SNCA-209ENST00000506244 TNFRSF13BO14836 293 aaPredicted RBP13.89□□□□□ -0.19
SNCA-209ENST00000506244 MYL12BO14950 172 aa13.89□□□□□ -0.19
SNCA-209ENST00000506244 GPR37O15354 613 aa13.89□□□□□ -0.19
SNCA-209ENST00000506244 RHBDL1O75783 438 aa13.89□□□□□ -0.19
SNCA-209ENST00000506244 ZFPL1O95159 310 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms