RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 PROKR2Q8NFJ6 384 aa1.86□□□□□ -2.11
TOPBP1-204ENST00000505804 OR2M7Q8NG81 312 aa1.86□□□□□ -2.11
TOPBP1-204ENST00000505804 OR10Z1Q8NGY1 313 aa1.86□□□□□ -2.11
TOPBP1-204ENST00000505804 ZNF420Q8TAQ5 688 aaPredicted RBP1.86□□□□□ -2.11
TOPBP1-204ENST00000505804 SMARCD1Q96GM5 515 aa1.86□□□□□ -2.11
TOPBP1-204ENST00000505804 DERL3Q96Q80 235 aa1.86□□□□□ -2.11
TOPBP1-204ENST00000505804 TBL1XR1Q9BZK7 514 aa1.86□□□□□ -2.11
TOPBP1-204ENST00000505804 OR2AG1Q9H205 316 aa1.86□□□□□ -2.11
TOPBP1-204ENST00000505804 ZNF586Q9NXT0 402 aa1.86□□□□□ -2.11
TOPBP1-204ENST00000505804 ZNF492Q9P255 531 aa1.86□□□□□ -2.11
TOPBP1-204ENST00000505804 ENPP4Q9Y6X5 453 aa1.86□□□□□ -2.11
TOPBP1-204ENST00000505804 SDK2Q58EX2 2172 aa1.86□□□□□ -2.11
TOPBP1-204ENST00000505804 JCADQ9P266 1359 aa1.85□□□□□ -2.11
TOPBP1-204ENST00000505804 C4orf51C9J302 202 aa1.85□□□□□ -2.11
TOPBP1-204ENST00000505804 SMC2O95347 1197 aa1.85□□□□□ -2.11
TOPBP1-204ENST00000505804 FSTL3O95633 263 aa1.85□□□□□ -2.11
TOPBP1-204ENST00000505804 NRASP01111 189 aa1.85□□□□□ -2.11
TOPBP1-204ENST00000505804 HRASP01112 189 aa1.85□□□□□ -2.11
TOPBP1-204ENST00000505804 KRASP01116 189 aa1.85□□□□□ -2.11
TOPBP1-204ENST00000505804 IGHV1-46P01743 117 aa1.85□□□□□ -2.11
TOPBP1-204ENST00000505804 INAFM2P0DMQ5 153 aa1.85□□□□□ -2.11
TOPBP1-204ENST00000505804 HRES1P13985 223 aa1.85□□□□□ -2.11
TOPBP1-204ENST00000505804 ERFP50548 548 aa1.85□□□□□ -2.11
TOPBP1-204ENST00000505804 GRB2P62993 217 aaKnown RBP1.85□□□□□ -2.11
TOPBP1-204ENST00000505804 MAPRE2Q15555 327 aa1.85□□□□□ -2.11
TOPBP1-204ENST00000505804 RNF10Q8N5U6 811 aaKnown RBP1.85□□□□□ -2.11
TOPBP1-204ENST00000505804 CYB561A3Q8NBI2 242 aa1.85□□□□□ -2.11
TOPBP1-204ENST00000505804 TCP10LQ8TDR4 215 aa1.85□□□□□ -2.11
TOPBP1-204ENST00000505804 BAALCQ8WXS3 180 aa1.85□□□□□ -2.11
TOPBP1-204ENST00000505804 YIPF6Q96EC8 236 aa1.85□□□□□ -2.11
TOPBP1-204ENST00000505804 CERS2Q96G23 380 aa1.85□□□□□ -2.11
TOPBP1-204ENST00000505804 TM2D3Q9BRN9 247 aa1.85□□□□□ -2.11
TOPBP1-204ENST00000505804 STMN4Q9H169 189 aaPredicted RBP1.85□□□□□ -2.11
TOPBP1-204ENST00000505804 OR51B5Q9H339 312 aa1.85□□□□□ -2.11
TOPBP1-204ENST00000505804 ZNF302Q9NR11 478 aa1.85□□□□□ -2.11
TOPBP1-204ENST00000505804 CHRAC1Q9NRG0 131 aa1.85□□□□□ -2.11
TOPBP1-204ENST00000505804 TMEM131Q92545 1883 aa1.85□□□□□ -2.11
TOPBP1-204ENST00000505804 ELP1O95163 1332 aa1.85□□□□□ -2.11
TOPBP1-204ENST00000505804 PLEKHG2Q9H7P9 1386 aa1.85□□□□□ -2.11
TOPBP1-204ENST00000505804 DFFAO00273 331 aa1.84□□□□□ -2.11
TOPBP1-204ENST00000505804 RALBP11234 206 aa1.84□□□□□ -2.11
TOPBP1-204ENST00000505804 RGS6P49758 472 aa1.84□□□□□ -2.11
TOPBP1-204ENST00000505804 PSMD4P55036 377 aaKnown RBP1.84□□□□□ -2.11
TOPBP1-204ENST00000505804 ADIGQ0VDE8 80 aa1.84□□□□□ -2.11
TOPBP1-204ENST00000505804 BIKQ13323 160 aa1.84□□□□□ -2.11
TOPBP1-204ENST00000505804 IHHQ14623 411 aa1.84□□□□□ -2.11
TOPBP1-204ENST00000505804 DEFB134Q4QY38 66 aa1.84□□□□□ -2.11
TOPBP1-204ENST00000505804 TTC19Q6DKK2 380 aaPredicted RBP1.84□□□□□ -2.11
TOPBP1-204ENST00000505804 OR2W3Q7Z3T1 314 aa1.84□□□□□ -2.11
TOPBP1-204ENST00000505804 ITPRIPQ8IWB1 547 aa1.84□□□□□ -2.11
TOPBP1-204ENST00000505804 LRRC8AQ8IWT6 810 aa1.84□□□□□ -2.11
TOPBP1-204ENST00000505804 ING5Q8WYH8 240 aa1.84□□□□□ -2.11
TOPBP1-204ENST00000505804 OR8D1Q8WZ84 308 aa1.84□□□□□ -2.11
TOPBP1-204ENST00000505804 ZNF707Q96C28 371 aaPredicted RBP1.84□□□□□ -2.11
TOPBP1-204ENST00000505804 BLZF1Q9H2G9 400 aa1.84□□□□□ -2.11
TOPBP1-204ENST00000505804 ARMC7Q9H6L4 198 aa1.84□□□□□ -2.11
TOPBP1-204ENST00000505804 VSIRQ9H7M9 311 aa1.84□□□□□ -2.11
TOPBP1-204ENST00000505804 TRIM45Q9H8W5 580 aaPredicted RBP1.84□□□□□ -2.11
TOPBP1-204ENST00000505804 SND1-IT1Q9HBX3 110 aa1.84□□□□□ -2.11
TOPBP1-204ENST00000505804 DDX18Q9NVP1 670 aaKnown RBP1.84□□□□□ -2.11
TOPBP1-204ENST00000505804 TAS2R1Q9NYW7 299 aa1.84□□□□□ -2.11
TOPBP1-204ENST00000505804 STX18Q9P2W9 335 aaKnown RBP1.84□□□□□ -2.11
TOPBP1-204ENST00000505804 SLC22A7Q9Y694 548 aa1.84□□□□□ -2.11
TOPBP1-204ENST00000505804 NACADO15069 1562 aa1.84□□□□□ -2.12
TOPBP1-204ENST00000505804 NEURL4Q96JN8 1562 aa1.84□□□□□ -2.12
TOPBP1-204ENST00000505804 SBNO1A3KN83 1393 aa1.84□□□□□ -2.12
TOPBP1-204ENST00000505804 CACNA1DQ01668 2161 aa1.83□□□□□ -2.12
TOPBP1-204ENST00000505804 TRAV8-4A0A0B4J246 113 aa1.83□□□□□ -2.12
TOPBP1-204ENST00000505804 IGHV2OR16-5A0A0B4J2B6 119 aa1.83□□□□□ -2.12
TOPBP1-204ENST00000505804 IZUMO1RA6ND01 250 aa1.83□□□□□ -2.12
TOPBP1-204ENST00000505804 H0YIV9 168 aa1.83□□□□□ -2.12
TOPBP1-204ENST00000505804 J3QT63 122 aa1.83□□□□□ -2.12
TOPBP1-204ENST00000505804 GCGP01275 180 aa1.83□□□□□ -2.12
TOPBP1-204ENST00000505804 P01737 135 aa1.83□□□□□ -2.12
TOPBP1-204ENST00000505804 KLK1P06870 262 aa1.83□□□□□ -2.12
TOPBP1-204ENST00000505804 OR5AC1P0C628 307 aa1.83□□□□□ -2.12
TOPBP1-204ENST00000505804 SEC11BP0C7V7 166 aa1.83□□□□□ -2.12
TOPBP1-204ENST00000505804 CFHR2P36980 270 aa1.83□□□□□ -2.12
TOPBP1-204ENST00000505804 BCAP31P51572 246 aa1.83□□□□□ -2.12
TOPBP1-204ENST00000505804 OR12D2P58182 307 aa1.83□□□□□ -2.12
TOPBP1-204ENST00000505804 ATP5G2Q06055 141 aa1.83□□□□□ -2.12
TOPBP1-204ENST00000505804 C2orf54Q08AI8 447 aa1.83□□□□□ -2.12
TOPBP1-204ENST00000505804 FAM104BQ5XKR9 115 aa1.83□□□□□ -2.12
TOPBP1-204ENST00000505804 ZFAND6Q6FIF0 208 aa1.83□□□□□ -2.12
TOPBP1-204ENST00000505804 OR4D6Q8NGJ1 314 aa1.83□□□□□ -2.12
TOPBP1-204ENST00000505804 FAM57AQ8TBR7 257 aa1.83□□□□□ -2.12
TOPBP1-204ENST00000505804 TMEM234Q8WY98 164 aa1.83□□□□□ -2.12
TOPBP1-204ENST00000505804 RBPMSQ93062 196 aaKnown RBP1.83□□□□□ -2.12
TOPBP1-204ENST00000505804 ZBED3Q96IU2 234 aaPredicted RBP1.83□□□□□ -2.12
TOPBP1-204ENST00000505804 PSME2Q9UL46 239 aa1.83□□□□□ -2.12
TOPBP1-204ENST00000505804 PRR14LQ5THK1 2151 aa1.83□□□□□ -2.12
TOPBP1-204ENST00000505804 NPHP4O75161 1426 aaPredicted RBP1.83□□□□□ -2.12
TOPBP1-204ENST00000505804 LOC100653049A0A140TA62 436 aa1.82□□□□□ -2.12
TOPBP1-204ENST00000505804 CASC3O15234 703 aaKnown RBP1.82□□□□□ -2.12
TOPBP1-204ENST00000505804 NDUFS5O43920 106 aa1.82□□□□□ -2.12
TOPBP1-204ENST00000505804 KRT34O76011 436 aa1.82□□□□□ -2.12
TOPBP1-204ENST00000505804 SFTPCP11686 197 aa1.82□□□□□ -2.12
TOPBP1-204ENST00000505804 LGALS3P17931 250 aaKnown RBP1.82□□□□□ -2.12
TOPBP1-204ENST00000505804 PAX6P26367 422 aa1.82□□□□□ -2.12
TOPBP1-204ENST00000505804 CCT6AP40227 531 aaKnown RBP1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms