RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 LHFPL3Q86UP9 236 aa8.28□□□□□ -1.08
NR1I3-220ENST00000505005 MAPK1IP1LQ8NDC0 245 aa8.28□□□□□ -1.08
NR1I3-220ENST00000505005 OR52I1Q8NGK6 324 aa8.28□□□□□ -1.08
NR1I3-220ENST00000505005 NANPQ8TBE9 248 aa8.28□□□□□ -1.08
NR1I3-220ENST00000505005 GPR148Q8TDV2 347 aa8.28□□□□□ -1.08
NR1I3-220ENST00000505005 UBE2FQ969M7 185 aa8.28□□□□□ -1.08
NR1I3-220ENST00000505005 JMJD8Q96S16 334 aa8.28□□□□□ -1.08
NR1I3-220ENST00000505005 MRPS26Q9BYN8 205 aaKnown RBP8.28□□□□□ -1.08
NR1I3-220ENST00000505005 PKIBQ9C010 78 aa8.28□□□□□ -1.08
NR1I3-220ENST00000505005 CHST5Q9GZS9 411 aa8.28□□□□□ -1.08
NR1I3-220ENST00000505005 UFSP2Q9NUQ7 469 aa8.28□□□□□ -1.08
NR1I3-220ENST00000505005 HIF1ANQ9NWT6 349 aa8.28□□□□□ -1.08
NR1I3-220ENST00000505005 BABAM2Q9NXR7 383 aa8.28□□□□□ -1.08
NR1I3-220ENST00000505005 ZNF319Q9P2F9 582 aa8.28□□□□□ -1.08
NR1I3-220ENST00000505005 DOCK11Q5JSL3 2073 aa8.28□□□□□ -1.08
NR1I3-220ENST00000505005 A0A087WXM4 84 aa8.27□□□□□ -1.09
NR1I3-220ENST00000505005 hCG_1809904A0A1W2PP81 198 aa8.27□□□□□ -1.09
NR1I3-220ENST00000505005 A0A1W2PPE2 198 aa8.27□□□□□ -1.09
NR1I3-220ENST00000505005 A0A1W2PR64 198 aa8.27□□□□□ -1.09
NR1I3-220ENST00000505005 A0A1W2PRV1 198 aa8.27□□□□□ -1.09
NR1I3-220ENST00000505005 CEACAM18A8MTB9 384 aa8.27□□□□□ -1.09
NR1I3-220ENST00000505005 ZNF732B4DXR9 585 aa8.27□□□□□ -1.09
NR1I3-220ENST00000505005 F5H0A9 414 aaPredicted RBP8.27□□□□□ -1.09
NR1I3-220ENST00000505005 P2RY10O00398 339 aa8.27□□□□□ -1.09
NR1I3-220ENST00000505005 CDIPTO14735 213 aa8.27□□□□□ -1.09
NR1I3-220ENST00000505005 ENSAO43768 121 aaKnown RBP8.27□□□□□ -1.09
NR1I3-220ENST00000505005 MT-ND2P03891 347 aa8.27□□□□□ -1.09
NR1I3-220ENST00000505005 CD1AP06126 327 aa8.27□□□□□ -1.09
NR1I3-220ENST00000505005 ZNF16P17020 682 aaPredicted RBP8.27□□□□□ -1.09
NR1I3-220ENST00000505005 GLRA1P23415 457 aa8.27□□□□□ -1.09
NR1I3-220ENST00000505005 FPR2P25090 351 aa8.27□□□□□ -1.09
NR1I3-220ENST00000505005 ACKR3P25106 362 aa8.27□□□□□ -1.09
NR1I3-220ENST00000505005 MAPK3P27361 379 aaPredicted RBP8.27□□□□□ -1.09
NR1I3-220ENST00000505005 PITPNBP48739 271 aa8.27□□□□□ -1.09
NR1I3-220ENST00000505005 OR12D2P58182 307 aa8.27□□□□□ -1.09
NR1I3-220ENST00000505005 BDH1Q02338 343 aa8.27□□□□□ -1.09
NR1I3-220ENST00000505005 ST3GAL4Q11206 333 aa8.27□□□□□ -1.09
NR1I3-220ENST00000505005 IL24Q13007 206 aa8.27□□□□□ -1.09
NR1I3-220ENST00000505005 ZMYND11Q15326 602 aa8.27□□□□□ -1.09
NR1I3-220ENST00000505005 TP53I3Q53FA7 332 aa8.27□□□□□ -1.09
NR1I3-220ENST00000505005 TMEM255AQ5JRV8 349 aa8.27□□□□□ -1.09
NR1I3-220ENST00000505005 C6orf141Q5SZD1 244 aa8.27□□□□□ -1.09
NR1I3-220ENST00000505005 MS4A15Q8N5U1 240 aa8.27□□□□□ -1.09
NR1I3-220ENST00000505005 SCCPDHQ8NBX0 429 aa8.27□□□□□ -1.09
NR1I3-220ENST00000505005 PPP1R35Q8TAP8 253 aa8.27□□□□□ -1.09
NR1I3-220ENST00000505005 ZNF420Q8TAQ5 688 aaPredicted RBP8.27□□□□□ -1.09
NR1I3-220ENST00000505005 LRRC29Q8WV35 223 aa8.27□□□□□ -1.09
NR1I3-220ENST00000505005 GTF3AQ92664 365 aaKnown RBP8.27□□□□□ -1.09
NR1I3-220ENST00000505005 TMIGD2Q96BF3 282 aa8.27□□□□□ -1.09
NR1I3-220ENST00000505005 LYZL4Q96KX0 146 aa8.27□□□□□ -1.09
NR1I3-220ENST00000505005 TMEM246Q9BRR3 403 aa8.27□□□□□ -1.09
NR1I3-220ENST00000505005 SEBOXQ9HB31 216 aaPredicted RBP8.27□□□□□ -1.09
NR1I3-220ENST00000505005 ACOXLQ9NUZ1 547 aa8.27□□□□□ -1.09
NR1I3-220ENST00000505005 PAK1IP1Q9NWT1 392 aaPredicted RBP8.27□□□□□ -1.09
NR1I3-220ENST00000505005 CKLFQ9UBR5 152 aa8.27□□□□□ -1.09
NR1I3-220ENST00000505005 DHDHQ9UQ10 334 aa8.27□□□□□ -1.09
NR1I3-220ENST00000505005 CSPG4Q6UVK1 2322 aa8.27□□□□□ -1.09
NR1I3-220ENST00000505005 A0A1B0GTI1 187 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 LOC107986453A0A1B0GWG9 222 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 INAFM1C9JVW0 142 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 J3QT63 122 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 SLC1A7O00341 560 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 NDUFB3O43676 98 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 PLPP2O43688 288 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 WBP4O75554 376 aaKnown RBP8.26□□□□□ -1.09
NR1I3-220ENST00000505005 CYB5R3P00387 301 aaPredicted RBP8.26□□□□□ -1.09
NR1I3-220ENST00000505005 FAHP16930 419 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 CRHBPP24387 322 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 PSMB10P40306 273 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 HAAOP46952 286 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 GPM6AP51674 278 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 MFGE8Q08431 387 aaPredicted RBP8.26□□□□□ -1.09
NR1I3-220ENST00000505005 DBPQ10586 325 aaPredicted RBP8.26□□□□□ -1.09
NR1I3-220ENST00000505005 GPR50Q13585 617 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 TRAM1Q15629 374 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 MPPED2Q15777 294 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 CR1LQ2VPA4 569 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 YIF1BQ5BJH7 314 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 WDR38Q5JTN6 314 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 FAM120AOSQ5T036 256 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 PRAMEF6Q5VXH4 476 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 FAHD2BQ6P2I3 314 aaPredicted RBP8.26□□□□□ -1.09
NR1I3-220ENST00000505005 WDR82Q6UXN9 313 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 SSX6Q7RTT6 188 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 CMTM4Q8IZR5 234 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 RFLNBQ8N5W9 214 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 GCSAMQ8N6F7 178 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 TSPAN14Q8NG11 270 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 OR5D13Q8NGL4 314 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 OR13C3Q8NGS6 347 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 APH1BQ8WW43 257 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 RAB40AQ8WXH6 277 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 PELI1Q96FA3 418 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 FAHD2AQ96GK7 314 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 SMR3AQ99954 134 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 MND1Q9BWT6 205 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 OR51I2Q9H344 312 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 NARFLQ9H6Q4 476 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 AMBNQ9NP70 447 aa8.26□□□□□ -1.09
NR1I3-220ENST00000505005 NDUFA13Q9P0J0 144 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms