RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 NPDC1Q9NQX5 325 aaPredicted RBP5.89□□□□□ -1.47
TOPBP1-203ENST00000503464 MRPL15Q9P015 296 aaKnown RBP5.89□□□□□ -1.47
TOPBP1-203ENST00000503464 ZNF581Q9P0T4 197 aa5.89□□□□□ -1.47
TOPBP1-203ENST00000503464 PURGQ9UJV8 347 aaKnown RBP5.89□□□□□ -1.47
TOPBP1-203ENST00000503464 ELF5Q9UKW6 265 aaPredicted RBP5.89□□□□□ -1.47
TOPBP1-203ENST00000503464 EPG5Q9HCE0 2579 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 KMT2BQ9UMN6 2715 aaPredicted RBP5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 IGLV3-9A0A075B6K5 115 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 ZNF732B4DXR9 585 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 F8VVB4 439 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 F8VWA3 439 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 CTDSPLO15194 276 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 MAGEB3O15480 346 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 PLA2G10O15496 165 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 XRCC3O43542 346 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 GSTZ1O43708 216 aaPredicted RBP5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 PLATP00750 562 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 CRYAAP02489 173 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 SFTPBP07988 381 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 CD3GP09693 182 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 ZNF250P15622 560 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 SPNP16150 400 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 LOXP28300 417 aaPredicted RBP5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 TALDO1P37837 337 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 RBMXP38159 391 aaKnown RBP5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 RAD52P43351 418 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 RFX2P48378 723 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 RBP2P50120 134 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 FABP6P51161 128 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 GPM6AP51674 278 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 GUCA2AQ02747 115 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 PDZK1IP1Q13113 114 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 SLC22A6Q4U2R8 563 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 C4orf17Q53FE4 359 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 RNASE12Q5GAN4 147 aaKnown RBP5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 PLAC9Q5JTB6 97 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 TMEM69Q5SWH9 247 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 PYHIN1Q6K0P9 492 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 OR2W3Q7Z3T1 314 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 OR8H2Q8N162 312 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 BATF2Q8N1L9 274 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 Q8N402 240 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 ZNF611Q8N823 705 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 ACBD4Q8NC06 268 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 OR8G5Q8NG78 346 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 OR5A2Q8NGI9 324 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 LINC01560Q8TB33 94 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 PRR7Q8TB68 274 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 SMIM4Q8WVI0 70 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 ITLN2Q8WWU7 325 aaPredicted RBP5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 ITFG2Q969R8 447 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 BORCS8Q96FH0 119 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 S100A16Q96FQ6 103 aaKnown RBP5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 TECTBQ96PL2 329 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 GPER1Q99527 375 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 USB1Q9BQ65 265 aaKnown RBP5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 BCL2L14Q9BZR8 327 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 ATG5Q9H1Y0 275 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 OR51I2Q9H344 312 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 IL36GQ9NZH8 169 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 ERRFI1Q9UJM3 462 aaPredicted RBP5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 RAB22AQ9UL26 194 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 KCNK7Q9Y2U2 307 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 MPC1Q9Y5U8 109 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 ADGRG4Q8IZF6 3080 aa5.88□□□□□ -1.47
TOPBP1-203ENST00000503464 TRAV18A0A075B6X5 111 aa5.87□□□□□ -1.47
TOPBP1-203ENST00000503464 A0A1B0GUH1 482 aa5.87□□□□□ -1.47
TOPBP1-203ENST00000503464 ZSCAN5BA6NJL1 495 aa5.87□□□□□ -1.47
TOPBP1-203ENST00000503464 ANKRD30BLA7E2S9 258 aa5.87□□□□□ -1.47
TOPBP1-203ENST00000503464 SHISA9B4DS77 424 aa5.87□□□□□ -1.47
TOPBP1-203ENST00000503464 ABCD4O14678 606 aa5.87□□□□□ -1.47
TOPBP1-203ENST00000503464 SOCS1O15524 211 aa5.87□□□□□ -1.47
TOPBP1-203ENST00000503464 SYNGR1O43759 233 aa5.87□□□□□ -1.47
TOPBP1-203ENST00000503464 ZG16O60844 167 aa5.87□□□□□ -1.47
TOPBP1-203ENST00000503464 CRTAPO75718 401 aaPredicted RBP5.87□□□□□ -1.47
TOPBP1-203ENST00000503464 RHBDL1O75783 438 aa5.87□□□□□ -1.47
TOPBP1-203ENST00000503464 TPPPO94811 219 aa5.87□□□□□ -1.47
TOPBP1-203ENST00000503464 MPIG6BO95866 241 aa5.87□□□□□ -1.47
TOPBP1-203ENST00000503464 IGHV3-13P01766 116 aa5.87□□□□□ -1.47
TOPBP1-203ENST00000503464 OCMP0CE72 109 aaPredicted RBP5.87□□□□□ -1.47
TOPBP1-203ENST00000503464 UBBP0CG47 229 aa5.87□□□□□ -1.47
TOPBP1-203ENST00000503464 RNF224P0DH78 156 aa5.87□□□□□ -1.47
TOPBP1-203ENST00000503464 TMEM225BP0DP42 221 aa5.87□□□□□ -1.47
TOPBP1-203ENST00000503464 PPP3CBP16298 524 aa5.87□□□□□ -1.47
TOPBP1-203ENST00000503464 MGMTP16455 207 aa5.87□□□□□ -1.47
TOPBP1-203ENST00000503464 SELEP16581 610 aa5.87□□□□□ -1.47
TOPBP1-203ENST00000503464 SERPINA2P20848 420 aa5.87□□□□□ -1.47
TOPBP1-203ENST00000503464 TUBG1P23258 451 aa5.87□□□□□ -1.47
TOPBP1-203ENST00000503464 MPZP25189 248 aa5.87□□□□□ -1.47
TOPBP1-203ENST00000503464 GLRXP35754 106 aa5.87□□□□□ -1.47
TOPBP1-203ENST00000503464 NPBWR2P48146 333 aa5.87□□□□□ -1.47
TOPBP1-203ENST00000503464 CAPZA1P52907 286 aa5.87□□□□□ -1.47
TOPBP1-203ENST00000503464 ATP1B3P54709 279 aa5.87□□□□□ -1.47
TOPBP1-203ENST00000503464 TMEM50BP56557 158 aa5.87□□□□□ -1.47
TOPBP1-203ENST00000503464 RPS27AP62979 156 aaKnown RBP5.87□□□□□ -1.47
TOPBP1-203ENST00000503464 HOXA4Q00056 320 aaPredicted RBP5.87□□□□□ -1.47
TOPBP1-203ENST00000503464 MAB21L1Q13394 359 aa5.87□□□□□ -1.47
TOPBP1-203ENST00000503464 ASAH1Q13510 395 aa5.87□□□□□ -1.47
TOPBP1-203ENST00000503464 OXA1LQ15070 435 aa5.87□□□□□ -1.47
TOPBP1-203ENST00000503464 ZNF260Q3ZCT1 412 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms