RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 ARRDC1-AS1Q9H2J1 176 aa15.37■□□□□ 0.05
HMGXB3-201ENST00000502717 PTBP3O95758 552 aaKnown RBP15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 SEC11BP0C7V7 166 aa15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 MPGP29372 298 aa15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 OR2C3Q8N628 320 aa15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 MUCL1Q96DR8 90 aa15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 FAM221AA4D161 298 aa15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 B4DEV8 164 aa15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 H0Y8X5 98 aa15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 RECKO95980 971 aa15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 OPN1MWP04001 364 aa15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 OPN1MW2P0DN77 364 aa15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 OPN1MW3P0DN78 364 aa15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 GDF1P27539 372 aa15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 SLC37A1P57057 533 aa15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 BTNL8Q6UX41 500 aa15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 RFLNBQ8N5W9 214 aa15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 CES1P1Q9UKY3 287 aa15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 ABHD16AO95870 558 aa15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 OIT3Q8WWZ8 545 aa15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 NAA60Q9H7X0 242 aa15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 FGF21Q9NSA1 209 aa15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 PLXNB2O15031 1838 aa15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 RBBP6Q7Z6E9 1792 aaKnown RBP15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 CTSDP07339 412 aaPredicted RBP15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 GUSBP08236 651 aa15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 HOXB1P14653 301 aaPredicted RBP15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 SULT1A2P50226 295 aa15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 OR2B11Q5JQS5 317 aa15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 SPANXN5Q5MJ07 72 aa15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 FAM58AQ8N1B3 248 aa15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 TMEM104Q8NE00 496 aa15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 ASB5Q8WWX0 329 aa15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 PACRGQ96M98 296 aaPredicted RBP15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 RAB9BQ9NP90 201 aa15.36■□□□□ 0.05
HMGXB3-201ENST00000502717 A0A1W2PPV9 198 aa15.35■□□□□ 0.05
HMGXB3-201ENST00000502717 G3V3Q6 166 aa15.35■□□□□ 0.05
HMGXB3-201ENST00000502717 EPPINO95925 133 aa15.35■□□□□ 0.05
HMGXB3-201ENST00000502717 CT62P0C5K7 136 aa15.35■□□□□ 0.05
HMGXB3-201ENST00000502717 DCDP81605 110 aaKnown RBP15.35■□□□□ 0.05
HMGXB3-201ENST00000502717 FUT5Q11128 374 aa15.35■□□□□ 0.05
HMGXB3-201ENST00000502717 MESTQ5EB52 335 aa15.35■□□□□ 0.05
HMGXB3-201ENST00000502717 ZNF574Q6ZN55 896 aaPredicted RBP15.35■□□□□ 0.05
HMGXB3-201ENST00000502717 ADAD2Q8NCV1 583 aaKnown RBP15.35■□□□□ 0.05
HMGXB3-201ENST00000502717 ZNF775Q96BV0 537 aaPredicted RBP15.35■□□□□ 0.05
HMGXB3-201ENST00000502717 IER2Q9BTL4 223 aa15.35■□□□□ 0.05
HMGXB3-201ENST00000502717 SMDT1Q9H4I9 107 aa15.35■□□□□ 0.05
HMGXB3-201ENST00000502717 TRIP12Q14669 1992 aaPredicted RBP15.35■□□□□ 0.05
HMGXB3-201ENST00000502717 P2RY1P47900 373 aa15.35■□□□□ 0.05
HMGXB3-201ENST00000502717 DUSP2Q05923 314 aa15.35■□□□□ 0.05
HMGXB3-201ENST00000502717 MSI2Q96DH6 328 aaKnown RBP15.35■□□□□ 0.05
HMGXB3-201ENST00000502717 OXGR1Q96P68 337 aa15.35■□□□□ 0.05
HMGXB3-201ENST00000502717 XKRY2A2RUG3 117 aa15.35■□□□□ 0.05
HMGXB3-201ENST00000502717 CTLA4P16410 223 aa15.35■□□□□ 0.05
HMGXB3-201ENST00000502717 THBS3P49746 956 aa15.35■□□□□ 0.05
HMGXB3-201ENST00000502717 ZNF90Q03938 601 aa15.35■□□□□ 0.05
HMGXB3-201ENST00000502717 SHBQ15464 509 aa15.35■□□□□ 0.05
HMGXB3-201ENST00000502717 KISS1Q15726 138 aa15.35■□□□□ 0.05
HMGXB3-201ENST00000502717 ZNF320A2RRD8 509 aa15.35■□□□□ 0.05
HMGXB3-201ENST00000502717 ARGFXA6NJG6 315 aa15.35■□□□□ 0.05
HMGXB3-201ENST00000502717 TMEM37Q8WXS4 190 aa15.35■□□□□ 0.05
HMGXB3-201ENST00000502717 ZNF845Q96IR2 970 aaPredicted RBP15.35■□□□□ 0.05
HMGXB3-201ENST00000502717 TRBV5-5A0A0J9YX44 114 aa15.34■□□□□ 0.05
HMGXB3-201ENST00000502717 M0R143 59 aa15.34■□□□□ 0.05
HMGXB3-201ENST00000502717 SEMA7AO75326 666 aa15.34■□□□□ 0.05
HMGXB3-201ENST00000502717 NRASP01111 189 aa15.34■□□□□ 0.05
HMGXB3-201ENST00000502717 CLEC12BQ2HXU8 276 aa15.34■□□□□ 0.05
HMGXB3-201ENST00000502717 PRAMEF20Q5VT98 475 aa15.34■□□□□ 0.05
HMGXB3-201ENST00000502717 CATSPERDQ86XM0 798 aa15.34■□□□□ 0.05
HMGXB3-201ENST00000502717 SIGLECL1Q8N7X8 197 aa15.34■□□□□ 0.05
HMGXB3-201ENST00000502717 INTS12Q96CB8 462 aaKnown RBP15.34■□□□□ 0.05
HMGXB3-201ENST00000502717 MS4A3Q96HJ5 214 aa15.34■□□□□ 0.05
HMGXB3-201ENST00000502717 CDX2Q99626 313 aaPredicted RBP15.34■□□□□ 0.05
HMGXB3-201ENST00000502717 ZMIZ1Q9ULJ6 1067 aa15.34■□□□□ 0.05
HMGXB3-201ENST00000502717 DNASE2O00115 360 aaPredicted RBP15.34■□□□□ 0.05
HMGXB3-201ENST00000502717 PLRG1O43660 514 aaKnown RBP15.34■□□□□ 0.05
HMGXB3-201ENST00000502717 COX5AP20674 150 aa15.34■□□□□ 0.05
HMGXB3-201ENST00000502717 TNFSF4P23510 183 aa15.34■□□□□ 0.05
HMGXB3-201ENST00000502717 MEGF10Q96KG7 1140 aa15.34■□□□□ 0.05
HMGXB3-201ENST00000502717 PSENENQ9NZ42 101 aa15.34■□□□□ 0.05
HMGXB3-201ENST00000502717 OR5C1Q8NGR4 320 aa15.34■□□□□ 0.05
HMGXB3-201ENST00000502717 MRPL33O75394 65 aaKnown RBP15.34■□□□□ 0.05
HMGXB3-201ENST00000502717 TPPP2P59282 170 aa15.34■□□□□ 0.05
HMGXB3-201ENST00000502717 ZNF117Q03924 483 aa15.34■□□□□ 0.05
HMGXB3-201ENST00000502717 FZD2Q14332 565 aa15.34■□□□□ 0.05
HMGXB3-201ENST00000502717 GCNT2Q8N0V5 402 aa15.34■□□□□ 0.05
HMGXB3-201ENST00000502717 OSR2Q8N2R0 312 aa15.34■□□□□ 0.05
HMGXB3-201ENST00000502717 CNEP1R1Q8N9A8 125 aa15.34■□□□□ 0.05
HMGXB3-201ENST00000502717 NRTNQ99748 197 aa15.34■□□□□ 0.05
HMGXB3-201ENST00000502717 GPR87Q9BY21 358 aa15.34■□□□□ 0.05
HMGXB3-201ENST00000502717 DYNLRB1Q9NP97 96 aa15.34■□□□□ 0.05
HMGXB3-201ENST00000502717 ST3GAL6Q9Y274 331 aa15.34■□□□□ 0.05
HMGXB3-201ENST00000502717 C2CD4DB7Z1M9 353 aa15.33■□□□□ 0.05
HMGXB3-201ENST00000502717 OR2J2O76002 312 aa15.33■□□□□ 0.05
HMGXB3-201ENST00000502717 ZBTB25P24278 435 aa15.33■□□□□ 0.05
HMGXB3-201ENST00000502717 GCH1P30793 250 aa15.33■□□□□ 0.05
HMGXB3-201ENST00000502717 ASCL1P50553 236 aa15.33■□□□□ 0.05
HMGXB3-201ENST00000502717 TMEM241Q24JQ0 296 aa15.33■□□□□ 0.05
HMGXB3-201ENST00000502717 RCC2Q9P258 522 aaKnown RBP15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms