RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 KRT6AP02538 564 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 KRT6BP04259 564 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 RPS17P08708 135 aaKnown RBP3.28□□□□□ -1.88
CSTF1-207ENST00000498689 ACADSP16219 412 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 IL7RP16871 459 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 SOAT1P35610 550 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 KRT6CP48668 564 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 PCBD1P61457 104 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 BDH1Q02338 343 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 KIAA0040Q15053 153 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 TIGD6Q17RP2 521 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 DEFB114Q30KQ6 69 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 C12orf74Q32Q52 190 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 TM4SF20Q53R12 229 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 CEP85LQ5SZL2 805 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 CALHM1Q8IU99 346 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 TGIF2LXQ8IUE1 241 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 LINC00471Q8N535 108 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 C10orf53Q8N6V4 93 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 Q8NAQ8 132 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 OR2K2Q8NGT1 345 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 OR5J2Q8NH18 312 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 OR2AE1Q8NHA4 323 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 OR1F12Q8NHA8 337 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 METTL6Q8TCB7 284 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 ZNF483Q8TF39 744 aaPredicted RBP3.28□□□□□ -1.88
CSTF1-207ENST00000498689 RPL3LQ92901 407 aaKnown RBP3.28□□□□□ -1.88
CSTF1-207ENST00000498689 DAZAP1Q96EP5 407 aaKnown RBP3.28□□□□□ -1.88
CSTF1-207ENST00000498689 SDSLQ96GA7 329 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 ZNF764Q96H86 408 aaPredicted RBP3.28□□□□□ -1.88
CSTF1-207ENST00000498689 PLSCR3Q9NRY6 295 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 GPR173Q9NS66 373 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 LIN7CQ9NUP9 197 aaKnown RBP3.28□□□□□ -1.88
CSTF1-207ENST00000498689 OR6C3Q9NZP0 311 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 UBQLN2Q9UHD9 624 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 GUCA1BQ9UMX6 200 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 SESN1Q9Y6P5 492 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 DUXAA6NLW8 204 aa3.27□□□□□ -1.89
CSTF1-207ENST00000498689 BUB1B-PAK6H3BSN5 160 aa3.27□□□□□ -1.89
CSTF1-207ENST00000498689 SLC28A1O00337 649 aa3.27□□□□□ -1.89
CSTF1-207ENST00000498689 LSM1O15116 133 aaKnown RBP3.27□□□□□ -1.89
CSTF1-207ENST00000498689 ATP6V0E1O15342 81 aa3.27□□□□□ -1.89
CSTF1-207ENST00000498689 TRBV12-3P01733 135 aa3.27□□□□□ -1.89
CSTF1-207ENST00000498689 KRT14P02533 472 aa3.27□□□□□ -1.89
CSTF1-207ENST00000498689 GUSBP08236 651 aa3.27□□□□□ -1.89
CSTF1-207ENST00000498689 TROVE2P10155 538 aaKnown RBP eCLIP3.27□□□□□ -1.89
CSTF1-207ENST00000498689 CTLA4P16410 223 aa3.27□□□□□ -1.89
CSTF1-207ENST00000498689 SDC1P18827 310 aa3.27□□□□□ -1.89
CSTF1-207ENST00000498689 HTR2AP28223 471 aa3.27□□□□□ -1.89
CSTF1-207ENST00000498689 HMOX2P30519 316 aa3.27□□□□□ -1.89
CSTF1-207ENST00000498689 NAA10P41227 235 aaPredicted RBP3.27□□□□□ -1.89
CSTF1-207ENST00000498689 ARHGDIBP52566 201 aa3.27□□□□□ -1.89
CSTF1-207ENST00000498689 HBA1P69905 142 aa3.27□□□□□ -1.89
CSTF1-207ENST00000498689 ZNF92Q03936 586 aa3.27□□□□□ -1.89
CSTF1-207ENST00000498689 RBM39Q14498 530 aaKnown RBP3.27□□□□□ -1.89
CSTF1-207ENST00000498689 ARMC4Q5T2S8 1044 aa3.27□□□□□ -1.89
CSTF1-207ENST00000498689 ZNF660Q6AZW8 331 aaPredicted RBP3.27□□□□□ -1.89
CSTF1-207ENST00000498689 METTL2BQ6P1Q9 378 aaKnown RBP3.27□□□□□ -1.89
CSTF1-207ENST00000498689 Q6ZRN7 208 aaPredicted RBP3.27□□□□□ -1.89
CSTF1-207ENST00000498689 FOXL2NBQ6ZUU3 175 aa3.27□□□□□ -1.89
CSTF1-207ENST00000498689 PGAP1Q75T13 922 aa3.27□□□□□ -1.89
CSTF1-207ENST00000498689 SLC16A13Q7RTY0 426 aa3.27□□□□□ -1.89
CSTF1-207ENST00000498689 OR52B4Q8NGK2 314 aa3.27□□□□□ -1.89
CSTF1-207ENST00000498689 NFKBIDQ8NI38 313 aa3.27□□□□□ -1.89
CSTF1-207ENST00000498689 TRMT10AQ8TBZ6 339 aaKnown RBP3.27□□□□□ -1.89
CSTF1-207ENST00000498689 CCDC42Q96M95 316 aa3.27□□□□□ -1.89
CSTF1-207ENST00000498689 TMEM70Q9BUB7 260 aa3.27□□□□□ -1.89
CSTF1-207ENST00000498689 TLNRD1Q9H1K6 362 aa3.27□□□□□ -1.89
CSTF1-207ENST00000498689 C1orf21Q9H246 121 aa3.27□□□□□ -1.89
CSTF1-207ENST00000498689 RNF167Q9H6Y7 350 aa3.27□□□□□ -1.89
CSTF1-207ENST00000498689 ZNF286AQ9HBT8 521 aa3.27□□□□□ -1.89
CSTF1-207ENST00000498689 SLC25A19Q9HC21 320 aa3.27□□□□□ -1.89
CSTF1-207ENST00000498689 ZC4H2Q9NQZ6 224 aa3.27□□□□□ -1.89
CSTF1-207ENST00000498689 POLE3Q9NRF9 147 aa3.27□□□□□ -1.89
CSTF1-207ENST00000498689 C14orf119Q9NWQ9 140 aa3.27□□□□□ -1.89
CSTF1-207ENST00000498689 ZIM2Q9NZV7 527 aa3.27□□□□□ -1.89
CSTF1-207ENST00000498689 NEBP20929 6669 aa3.27□□□□□ -1.89
CSTF1-207ENST00000498689 IGHV3-72A0A0B4J1Y9 119 aa3.26□□□□□ -1.89
CSTF1-207ENST00000498689 IGHV4-28A0A0C4DH34 117 aa3.26□□□□□ -1.89
CSTF1-207ENST00000498689 KIR2DL5BA0A0G2JN68 375 aa3.26□□□□□ -1.89
CSTF1-207ENST00000498689 KIR2DL5BA0A0G2JPC4 375 aa3.26□□□□□ -1.89
CSTF1-207ENST00000498689 A0A1B0GWA3 101 aa3.26□□□□□ -1.89
CSTF1-207ENST00000498689 ZNF850A8MQ14 1090 aa3.26□□□□□ -1.89
CSTF1-207ENST00000498689 C12orf71A8MTZ7 269 aa3.26□□□□□ -1.89
CSTF1-207ENST00000498689 RER1O15258 196 aa3.26□□□□□ -1.89
CSTF1-207ENST00000498689 SERPINA1P01009 418 aa3.26□□□□□ -1.89
CSTF1-207ENST00000498689 RBP4P02753 201 aa3.26□□□□□ -1.89
CSTF1-207ENST00000498689 SLC2A2P11168 524 aaPredicted RBP3.26□□□□□ -1.89
CSTF1-207ENST00000498689 MSR1P21757 451 aa3.26□□□□□ -1.89
CSTF1-207ENST00000498689 GRK5P34947 590 aa3.26□□□□□ -1.89
CSTF1-207ENST00000498689 MNDAP41218 407 aa3.26□□□□□ -1.89
CSTF1-207ENST00000498689 F2RL1P55085 397 aa3.26□□□□□ -1.89
CSTF1-207ENST00000498689 CD47Q08722 323 aa3.26□□□□□ -1.89
CSTF1-207ENST00000498689 MAPK11Q15759 364 aa3.26□□□□□ -1.89
CSTF1-207ENST00000498689 SMN1Q16637 294 aaKnown RBP3.26□□□□□ -1.89
CSTF1-207ENST00000498689 DUSP7Q16829 419 aa3.26□□□□□ -1.89
CSTF1-207ENST00000498689 PRAMEF5Q5TYX0 476 aa3.26□□□□□ -1.89
CSTF1-207ENST00000498689 LIPMQ5VYY2 423 aa3.26□□□□□ -1.89
CSTF1-207ENST00000498689 TTC27Q6P3X3 843 aa3.26□□□□□ -1.89
CSTF1-207ENST00000498689 CCDC137Q6PK04 289 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms