RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 THAP5Q7Z6K1 395 aa11.85□□□□□ -0.51
TRAF4-212ENST00000498540 CD177Q8N6Q3 437 aa11.85□□□□□ -0.51
TRAF4-212ENST00000498540 PAPD5Q8NDF8 572 aaKnown RBP11.85□□□□□ -0.51
TRAF4-212ENST00000498540 OR4M1Q8NGD0 313 aa11.85□□□□□ -0.51
TRAF4-212ENST00000498540 OR51I2Q9H344 312 aa11.85□□□□□ -0.51
TRAF4-212ENST00000498540 IL1RAPQ9NPH3 570 aa11.85□□□□□ -0.51
TRAF4-212ENST00000498540 ARMC1Q9NVT9 282 aa11.85□□□□□ -0.51
TRAF4-212ENST00000498540 LRP12Q9Y561 859 aa11.85□□□□□ -0.51
TRAF4-212ENST00000498540 FAM183AA6NL82 134 aa11.84□□□□□ -0.51
TRAF4-212ENST00000498540 ZNF732B4DXR9 585 aa11.84□□□□□ -0.51
TRAF4-212ENST00000498540 CCDC22O60826 627 aa11.84□□□□□ -0.51
TRAF4-212ENST00000498540 PEX14O75381 377 aa11.84□□□□□ -0.51
TRAF4-212ENST00000498540 MTRF1O75570 445 aaKnown RBP11.84□□□□□ -0.51
TRAF4-212ENST00000498540 SASH3O75995 380 aa11.84□□□□□ -0.51
TRAF4-212ENST00000498540 GLCEO94923 617 aa11.84□□□□□ -0.51
TRAF4-212ENST00000498540 PAICSP22234 425 aaKnown RBP11.84□□□□□ -0.51
TRAF4-212ENST00000498540 GSTT1P30711 240 aa11.84□□□□□ -0.51
TRAF4-212ENST00000498540 MSX2P35548 267 aaPredicted RBP11.84□□□□□ -0.51
TRAF4-212ENST00000498540 CEBPDP49716 269 aaPredicted RBP11.84□□□□□ -0.51
TRAF4-212ENST00000498540 CEP78Q5JTW2 689 aa11.84□□□□□ -0.51
TRAF4-212ENST00000498540 LDLRAD2Q5SZI1 272 aa11.84□□□□□ -0.51
TRAF4-212ENST00000498540 OR8B12Q8NGG6 310 aa11.84□□□□□ -0.51
TRAF4-212ENST00000498540 AQP3Q92482 292 aa11.84□□□□□ -0.51
TRAF4-212ENST00000498540 PRSS22Q9GZN4 317 aa11.84□□□□□ -0.51
TRAF4-212ENST00000498540 USE1Q9NZ43 259 aa11.84□□□□□ -0.51
TRAF4-212ENST00000498540 MAGEL2Q9UJ55 1249 aa11.84□□□□□ -0.51
TRAF4-212ENST00000498540 WI2-2373I1.2A0A1W2PRP0 233 aa11.83□□□□□ -0.52
TRAF4-212ENST00000498540 RFPL4AA6NLU0 287 aa11.83□□□□□ -0.52
TRAF4-212ENST00000498540 RIIAD1A6NNX1 92 aa11.83□□□□□ -0.52
TRAF4-212ENST00000498540 RFPL4AL1F8VTS6 287 aa11.83□□□□□ -0.52
TRAF4-212ENST00000498540 TNFRSF11BO00300 401 aa11.83□□□□□ -0.52
TRAF4-212ENST00000498540 ARPC2O15144 300 aa11.83□□□□□ -0.52
TRAF4-212ENST00000498540 FAHP16930 419 aa11.83□□□□□ -0.52
TRAF4-212ENST00000498540 HMGA2P52926 109 aa11.83□□□□□ -0.52
TRAF4-212ENST00000498540 KRTAP10-11P60412 298 aa11.83□□□□□ -0.52
TRAF4-212ENST00000498540 BLCAPP62952 87 aa11.83□□□□□ -0.52
TRAF4-212ENST00000498540 GNG3P63215 75 aa11.83□□□□□ -0.52
TRAF4-212ENST00000498540 PPP1R8Q12972 351 aaKnown RBP11.83□□□□□ -0.52
TRAF4-212ENST00000498540 ARSJQ5FYB0 599 aaPredicted RBP11.83□□□□□ -0.52
TRAF4-212ENST00000498540 HAGHLQ6PII5 290 aaPredicted RBP11.83□□□□□ -0.52
TRAF4-212ENST00000498540 ACP7Q6ZNF0 438 aa11.83□□□□□ -0.52
TRAF4-212ENST00000498540 AQP11Q8NBQ7 271 aa11.83□□□□□ -0.52
TRAF4-212ENST00000498540 OR2T33Q8NG76 320 aa11.83□□□□□ -0.52
TRAF4-212ENST00000498540 RPS4Y2Q8TD47 263 aa11.83□□□□□ -0.52
TRAF4-212ENST00000498540 NSMCE2Q96MF7 247 aa11.83□□□□□ -0.52
TRAF4-212ENST00000498540 ZNF488Q96MN9 340 aa11.83□□□□□ -0.52
TRAF4-212ENST00000498540 HIST1H2AAQ96QV6 131 aa11.83□□□□□ -0.52
TRAF4-212ENST00000498540 ABCB10Q9NRK6 738 aa11.83□□□□□ -0.52
TRAF4-212ENST00000498540 BAIAP2Q9UQB8 552 aa11.83□□□□□ -0.52
TRAF4-212ENST00000498540 A0A1W2PPH5 198 aa11.82□□□□□ -0.52
TRAF4-212ENST00000498540 ODF3BA8MYP8 253 aa11.82□□□□□ -0.52
TRAF4-212ENST00000498540 KRT36O76013 467 aa11.82□□□□□ -0.52
TRAF4-212ENST00000498540 IFNGP01579 166 aa11.82□□□□□ -0.52
TRAF4-212ENST00000498540 ARG1P05089 322 aa11.82□□□□□ -0.52
TRAF4-212ENST00000498540 PF4V1P10720 104 aa11.82□□□□□ -0.52
TRAF4-212ENST00000498540 HSD17B1P14061 328 aa11.82□□□□□ -0.52
TRAF4-212ENST00000498540 ZNF3P17036 446 aa11.82□□□□□ -0.52
TRAF4-212ENST00000498540 JUNBP17275 347 aaPredicted RBP11.82□□□□□ -0.52
TRAF4-212ENST00000498540 VDAC2P45880 294 aaPredicted RBP11.82□□□□□ -0.52
TRAF4-212ENST00000498540 DLX6P56179 175 aa11.82□□□□□ -0.52
TRAF4-212ENST00000498540 PSMA6P60900 246 aaKnown RBP11.82□□□□□ -0.52
TRAF4-212ENST00000498540 CD83Q01151 205 aa11.82□□□□□ -0.52
TRAF4-212ENST00000498540 SSX2Q16385 188 aa11.82□□□□□ -0.52
TRAF4-212ENST00000498540 CEACAM21Q3KPI0 293 aa11.82□□□□□ -0.52
TRAF4-212ENST00000498540 DEFB121Q5J5C9 76 aa11.82□□□□□ -0.52
TRAF4-212ENST00000498540 SAMD4BQ5PRF9 694 aaKnown RBP11.82□□□□□ -0.52
TRAF4-212ENST00000498540 SHFQ7M4L6 423 aa11.82□□□□□ -0.52
TRAF4-212ENST00000498540 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.82□□□□□ -0.52
TRAF4-212ENST00000498540 OR2T27Q8NH04 317 aa11.82□□□□□ -0.52
TRAF4-212ENST00000498540 ZNF671Q8TAW3 534 aa11.82□□□□□ -0.52
TRAF4-212ENST00000498540 OTULINQ96BN8 352 aa11.82□□□□□ -0.52
TRAF4-212ENST00000498540 FOXRED1Q96CU9 486 aaPredicted RBP11.82□□□□□ -0.52
TRAF4-212ENST00000498540 MUC13Q9H3R2 512 aa11.82□□□□□ -0.52
TRAF4-212ENST00000498540 CMC2Q9NRP2 79 aa11.82□□□□□ -0.52
TRAF4-212ENST00000498540 TAS2R1Q9NYW7 299 aa11.82□□□□□ -0.52
TRAF4-212ENST00000498540 KLHDC2Q9Y2U9 406 aa11.82□□□□□ -0.52
TRAF4-212ENST00000498540 DSCAML1Q8TD84 2053 aa11.82□□□□□ -0.52
TRAF4-212ENST00000498540 hCG_1809904A0A1W2PP81 198 aa11.81□□□□□ -0.52
TRAF4-212ENST00000498540 A0A1W2PPE2 198 aa11.81□□□□□ -0.52
TRAF4-212ENST00000498540 A0A1W2PR64 198 aa11.81□□□□□ -0.52
TRAF4-212ENST00000498540 A0A1W2PRV1 198 aa11.81□□□□□ -0.52
TRAF4-212ENST00000498540 SLC1A7O00341 560 aa11.81□□□□□ -0.52
TRAF4-212ENST00000498540 SELENOFO60613 162 aa11.81□□□□□ -0.52
TRAF4-212ENST00000498540 CCNB2O95067 398 aa11.81□□□□□ -0.52
TRAF4-212ENST00000498540 LYNP07948 512 aa11.81□□□□□ -0.52
TRAF4-212ENST00000498540 PIPP12273 146 aaPredicted RBP11.81□□□□□ -0.52
TRAF4-212ENST00000498540 SMIM21Q3B7S5 101 aa11.81□□□□□ -0.52
TRAF4-212ENST00000498540 TCTEX1D4Q5JR98 221 aa11.81□□□□□ -0.52
TRAF4-212ENST00000498540 KRT74Q7RTS7 529 aa11.81□□□□□ -0.52
TRAF4-212ENST00000498540 ZNF561Q8N587 486 aa11.81□□□□□ -0.52
TRAF4-212ENST00000498540 IQCF1Q8N6M8 205 aa11.81□□□□□ -0.52
TRAF4-212ENST00000498540 POC1AQ8NBT0 407 aa11.81□□□□□ -0.52
TRAF4-212ENST00000498540 OR5AU1Q8NGC0 362 aa11.81□□□□□ -0.52
TRAF4-212ENST00000498540 OTOSQ8NHW6 89 aa11.81□□□□□ -0.52
TRAF4-212ENST00000498540 FAM81AQ8TBF8 368 aa11.81□□□□□ -0.52
TRAF4-212ENST00000498540 THEM6Q8WUY1 208 aa11.81□□□□□ -0.52
TRAF4-212ENST00000498540 CMTM5Q96DZ9 223 aa11.81□□□□□ -0.52
TRAF4-212ENST00000498540 OCSTAMPQ9BR26 566 aa11.81□□□□□ -0.52
TRAF4-212ENST00000498540 C1orf21Q9H246 121 aa11.81□□□□□ -0.52
TRAF4-212ENST00000498540 CCDC134Q9H6E4 229 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms