RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 TRAPPC2BP0DI82 140 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 PSMB1P20618 241 aaKnown RBP7.27□□□□□ -1.25
USP54-215ENST00000497106 MDH2P40926 338 aaKnown RBP7.27□□□□□ -1.25
USP54-215ENST00000497106 UCP2P55851 309 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 IKZF1Q13422 519 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 CEACAM21Q3KPI0 293 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 STEAP1BQ6NZ63 245 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 C1orf87Q8N0U7 546 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 CADM3Q8N126 398 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 ZFAND1Q8TCF1 268 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 CA5BP1Q8WTZ4 195 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 C11orf54Q9H0W9 315 aaPredicted RBP7.27□□□□□ -1.25
USP54-215ENST00000497106 NLKQ9UBE8 527 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 HEATR5AQ86XA9 2040 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 hCG_38984A0A1B0GV85 526 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 FAM172BPA6NC97 362 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 PRR32B1ATL7 298 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 J3QT63 122 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 CCL21O00585 134 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 SH2D1BO14796 132 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 FCER2P06734 321 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 MMP7P09237 267 aaPredicted RBP7.27□□□□□ -1.25
USP54-215ENST00000497106 ZNF44P15621 663 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 TNFRSF1AP19438 455 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 HAAOP46952 286 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 SLC22A25Q6T423 547 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 SLC38A6Q8IZM9 456 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 DTX3Q8N9I9 347 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 TAAR6Q96RI8 345 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 VRK1Q99986 396 aaPredicted RBP7.27□□□□□ -1.25
USP54-215ENST00000497106 PKIBQ9C010 78 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 FBLN5Q9UBX5 448 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 DUSP13Q9UII6 198 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 ZNF222Q9UK12 451 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 CSAG2Q9Y5P2 127 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 A0A1B0GTI1 187 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 A0A1B0GW55 424 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 LRP5LA4QPB2 252 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 CREBL2O60519 120 aaPredicted RBP7.27□□□□□ -1.25
USP54-215ENST00000497106 WISP1O95388 367 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 DUX4L2P0CJ85 424 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 DUX4L3P0CJ86 424 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 DUX4L4P0CJ87 422 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 DUX4L5P0CJ88 424 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 DUX4L6P0CJ89 424 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 DUX4L7P0CJ90 424 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 CFPP27918 469 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 OR8B8Q15620 311 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 SMIM21Q3B7S5 101 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 OR2T2Q6IF00 324 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 VWA1Q6PCB0 445 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 MOB1BQ7L9L4 216 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 OR4K15Q8NH41 348 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 OR52I2Q8NH67 350 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 SYT3Q9BQG1 590 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 MYEF2Q9P2K5 600 aaKnown RBP7.27□□□□□ -1.25
USP54-215ENST00000497106 DUX4Q9UBX2 424 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 KCNIP3Q9Y2W7 256 aa7.27□□□□□ -1.25
USP54-215ENST00000497106 A6NIN4 97 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 NKX6-3A6NJ46 265 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 CHRNB4P30926 498 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 KIR2DL2P43627 348 aaPredicted RBP7.26□□□□□ -1.25
USP54-215ENST00000497106 ZNF92Q03936 586 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 MAB21L1Q13394 359 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 MPV17LQ2QL34 196 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 SLC25A26Q70HW3 274 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 FJX1Q86VR8 437 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 OR5AS1Q8N127 324 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 SLC39A7Q92504 469 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 POM121L2Q96KW2 1035 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 PDCD10Q9BUL8 212 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 C1QTNF6Q9BXI9 259 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 A0A0G2JK05 382 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 H7C417 338 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 AKR7A2O43488 359 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 CA11O75493 328 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 HIST1H1DP16402 221 aaKnown RBP7.26□□□□□ -1.25
USP54-215ENST00000497106 RFX2P48378 723 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 RPS27AP62979 156 aaKnown RBP7.26□□□□□ -1.25
USP54-215ENST00000497106 FAM3AP98173 230 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 LPCAT3Q6P1A2 487 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 NAA40Q86UY6 237 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 UXS1Q8NBZ7 420 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 SLC25A40Q8TBP6 338 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 RAB39BQ96DA2 213 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 DECR2Q9NUI1 292 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 MTFP1Q9UDX5 166 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 A0A087WV48 116 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 CD3EP07766 207 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 MAGEB1P43366 347 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 OR3A4PP47883 348 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 RAG2P55895 527 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 DGCR2P98153 550 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 DBPQ10586 325 aaPredicted RBP7.26□□□□□ -1.25
USP54-215ENST00000497106 TNK1Q13470 666 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 SNAI3Q3KNW1 292 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 BTN2A1Q7KYR7 527 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 BPIFB2Q8N4F0 458 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 CCDC120Q96HB5 630 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 DNTTIP1Q9H147 329 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms