RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 GINS2Q9Y248 185 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 MYO5AQ9Y4I1 1855 aaKnown RBP3.47□□□□□ -1.85
SF3B1-212ENST00000496458 WDR90Q96KV7 1748 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 NRCAMQ92823 1304 aa3.46□□□□□ -1.85
SF3B1-212ENST00000496458 MYH2Q9UKX2 1941 aa3.46□□□□□ -1.85
SF3B1-212ENST00000496458 ARID1AO14497 2285 aa3.46□□□□□ -1.85
SF3B1-212ENST00000496458 GTF3C1Q12789 2109 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 TSPAN11A1L157 253 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 OR6C70A6NIJ9 312 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 DCTN6O00399 190 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 CCRL2O00421 344 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 TXNDC9O14530 226 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 DENRO43583 198 aaKnown RBP3.46□□□□□ -1.86
SF3B1-212ENST00000496458 FKBP6O75344 327 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 CLDN11O75508 207 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 RPP14O95059 124 aaKnown RBP3.46□□□□□ -1.86
SF3B1-212ENST00000496458 TNFAIP8O95379 198 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 FGF1P05230 155 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 CALB1P05937 261 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 C2P06681 752 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 RD3LP0DJH9 198 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 PSKH1P11801 424 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 MLNP12872 115 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 RPS12P25398 132 aaKnown RBP3.46□□□□□ -1.86
SF3B1-212ENST00000496458 LEPP41159 167 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 PTGDSP41222 190 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 CDKN2CP42773 168 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 BTDP43251 543 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 MAGEA2P43356 314 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 KIR2DS2P43631 304 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 CLDN6P56747 220 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 MLF1P58340 268 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 RAB4BP61018 213 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 RPL10AP62906 217 aaKnown RBP3.46□□□□□ -1.86
SF3B1-212ENST00000496458 C2orf54Q08AI8 447 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 STX5Q13190 355 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 APOFQ13790 326 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 ATP6V1FQ16864 119 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 KCTD19Q17RG1 926 aaPredicted RBP3.46□□□□□ -1.86
SF3B1-212ENST00000496458 TEX30Q5JUR7 227 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 CYB5R2Q6BCY4 276 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 ADNP2Q6IQ32 1131 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 NANOGP8Q6NSW7 305 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 UGT2A3Q6UWM9 527 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 SETD3Q86TU7 594 aaPredicted RBP3.46□□□□□ -1.86
SF3B1-212ENST00000496458 UNC93AQ86WB7 457 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 BBS7Q8IWZ6 715 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 MTURNQ8N3F0 131 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 KIF2BQ8N4N8 673 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 TMEM252Q8N6L7 170 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 OR6K2Q8NGY2 324 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 MCOLN3Q8TDD5 553 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 KCTD4Q8WVF5 259 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 RDH5Q92781 318 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 STARD4Q96DR4 205 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 DUS3LQ96G46 650 aaKnown RBP3.46□□□□□ -1.86
SF3B1-212ENST00000496458 UTP23Q9BRU9 249 aaKnown RBP3.46□□□□□ -1.86
SF3B1-212ENST00000496458 TMEM109Q9BVC6 243 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 TMEM59Q9BXS4 323 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 CHRNA10Q9GZZ6 450 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 RBKSQ9H477 322 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 ARMC7Q9H6L4 198 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 BEX1Q9HBH7 125 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 SIRT7Q9NRC8 400 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 PARVAQ9NVD7 372 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 FGFR1OP2Q9NVK5 253 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 PAK1IP1Q9NWT1 392 aaPredicted RBP3.46□□□□□ -1.86
SF3B1-212ENST00000496458 WARS2Q9UGM6 360 aaKnown RBP3.46□□□□□ -1.86
SF3B1-212ENST00000496458 LGALS13Q9UHV8 139 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 RIMS3Q9UJD0 308 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 PRG3Q9Y2Y8 225 aaPredicted RBP3.46□□□□□ -1.86
SF3B1-212ENST00000496458 RLFQ13129 1914 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 AKAP11Q9UKA4 1901 aa3.46□□□□□ -1.86
SF3B1-212ENST00000496458 KIAA0100Q14667 2235 aaKnown RBP3.46□□□□□ -1.86
SF3B1-212ENST00000496458 TRPM7Q96QT4 1865 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 M0QXV9 152 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 CCL21O00585 134 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 MRPS12O15235 138 aaKnown RBP3.45□□□□□ -1.86
SF3B1-212ENST00000496458 SGCEO43556 437 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 TRAF3IP2O43734 574 aaPredicted RBP3.45□□□□□ -1.86
SF3B1-212ENST00000496458 SNAP29O95721 258 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 IGHV2-5P01817 119 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 FGGP02679 453 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 CALCRP30988 508 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 SERPINB5P36952 375 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 SSR4P51571 173 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 XKP51811 444 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 FLI1Q01543 452 aaPredicted RBP3.45□□□□□ -1.86
SF3B1-212ENST00000496458 MADCAM1Q13477 382 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 MAD2L1BPQ15013 274 aaPredicted RBP3.45□□□□□ -1.86
SF3B1-212ENST00000496458 C5orf64Q2M2E5 130 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 HES5Q5TA89 166 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 C1orf146Q5VVC0 180 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 FAHD1Q6P587 224 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 IZUMO2Q6UXV1 221 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 TMEM25Q86YD3 366 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 FUNDC1Q8IVP5 155 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 SVOPLQ8N434 492 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 TBC1D19Q8N5T2 526 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 ARIH2OSQ8N7S6 290 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms